Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001270g0210 Nicotiana tabacum HOM05D004936 ORTHO05D005977 2.2e-57 225.3 109 100.0
Nitab4.5_0003484g0120 Nicotiana tabacum HOM05D004936 ORTHO05D005977 2.3e-25 119.0 129 56.6
Nitab4.5_0000158g0090 Nicotiana tabacum HOM05D004936 ORTHO05D005977 3.3e-24 115.2 126 56.3
Nitab4.5_0000570g0350 Nicotiana tabacum HOM05D004936 ORTHO05D005977 3.3e-24 115.2 126 56.3
Hma1.2p1_0146F.1_g065480 Hydrangea macrophylla HOM05D004936 ORTHO05D005977 4.2e-24 114.8 127 54.3
Nitab4.5_0002493g0030 Nicotiana tabacum HOM05D004936 ORTHO05D005977 7.2e-24 114.0 126 55.6
Solyc11g068980.2 Solanum lycopersicum HOM05D004936 ORTHO05D005977 9.5e-24 113.6 126 56.3
Sopen11g027690 Solanum pennellii HOM05D004936 ORTHO05D005977 9.5e-24 113.6 126 56.3
Peaxi162Scf00624g00914 Petunia axillaris HOM05D004936 ORTHO05D005977 2.1e-23 112.5 77 75.3
PGSC0003DMG402019636 Solanum tuberosum HOM05D004936 ORTHO05D005977 2.1e-23 112.5 77 76.6
CAN.G3648.1 Capsicum annuum HOM05D004936 ORTHO05D005977 2.8e-23 112.1 132 53.8
CAN.G689.18 Capsicum annuum HOM05D004936 ORTHO05D005977 2.8e-23 112.1 132 53.8
SalBow5G1663 Salvia bowleyana HOM05D004936 ORTHO05D005977 5.2e-22 107.8 87 63.2
CSS0031896 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 6.8e-22 107.5 127 49.6
CSS0046409 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 6.8e-22 107.5 127 49.6
Sc12g0000320 Simmondsia chinensis HOM05D004936 ORTHO05D005977 6.8e-22 107.5 87 65.5
Lsat_1_v5_gn_2_60241 Lactuca sativa HOM05D004936 ORTHO05D005977 8.9e-22 107.1 123 51.2
Hund18959 Selenicereus undatus HOM05D004936 ORTHO05D005977 1.2e-21 106.7 87 64.4
THA.LOC104812175 Tarenaya hassleriana HOM05D004936 ORTHO05D005977 2.0e-21 105.9 87 63.2
vmacro02929 Vaccinium macrocarpon HOM05D004936 ORTHO05D005977 2.0e-21 105.9 89 59.6
GSVIVG01024670001 Vitis vinifera HOM05D004936 ORTHO05D005977 2.0e-21 105.9 126 50.8
Migut.G00331 Erythranthe guttata HOM05D004936 ORTHO05D005977 3.4e-21 105.1 87 59.8
Haze_24392 Corylus avellana HOM05D004936 ORTHO05D005977 7.5e-21 104.0 77 70.1
Dinv28681 Davidia involucrata HOM05D004936 ORTHO05D005977 7.5e-21 104.0 127 49.6
Oeu011630.1 Olea europaea HOM05D004936 ORTHO05D005977 7.5e-21 104.0 78 67.9
Sabra16G0174900 Salix brachista HOM05D004936 ORTHO05D005977 7.5e-21 104.0 88 59.1
Phvul.011G019700 Phaseolus vulgaris HOM05D004936 ORTHO05D005977 9.8e-21 103.6 126 51.6
VMungo1127G0545 Vigna mungo HOM05D004936 ORTHO05D005977 9.8e-21 103.6 126 51.6
Actinidia23210 Actinidia chinensis HOM05D004936 ORTHO05D005977 1.3e-20 103.2 77 68.8
BcaC07g38896 Brassica carinata HOM05D004936 ORTHO05D005977 1.7e-20 102.8 87 62.1
C08p18520 Brassica napus HOM05D004936 ORTHO05D005977 1.7e-20 102.8 87 62.1
BolC8t49484H Brassica oleracea HOM05D004936 ORTHO05D005977 1.7e-20 102.8 87 62.1
Potri.001G281200 Populus trichocarpa HOM05D004936 ORTHO05D005977 1.7e-20 102.8 87 60.9
Sp1g16280 Schrenkiella parvula HOM05D004936 ORTHO05D005977 1.7e-20 102.8 87 60.9
SGA_v2.0_scaffold39G15257 Striga asiatica HOM05D004936 ORTHO05D005977 1.7e-20 102.8 76 69.7
TAR636G1077 Trochodendron aralioides HOM05D004936 ORTHO05D005977 1.7e-20 102.8 126 50.0
MSTRG.4026 Avicennia marina HOM05D004936 ORTHO05D005977 2.2e-20 102.4 76 71.1
Manes.03G100200 Manihot esculenta HOM05D004936 ORTHO05D005977 2.2e-20 102.4 87 60.9
AL1G30690 Arabidopsis lyrata HOM05D004936 ORTHO05D005977 3.7e-20 101.7 87 59.8
Thhalv10008922m.g Eutrema salsugineum HOM05D004936 ORTHO05D005977 3.7e-20 101.7 87 59.8
Lj3g0015200 Lotus japonicus HOM05D004936 ORTHO05D005977 3.7e-20 101.7 127 52.0
BraA08t34977Z Brassica rapa HOM05D004936 ORTHO05D005977 4.9e-20 101.3 87 60.9
Potri.009G076400 Populus trichocarpa HOM05D004936 ORTHO05D005977 4.9e-20 101.3 87 59.8
Manes.15G096000 Manihot esculenta HOM05D004936 ORTHO05D005977 6.3e-20 100.9 87 58.6
Aa31LG7G2800 Aethionema arabicum HOM05D004936 ORTHO05D005977 8.3e-20 100.5 87 59.8
Glyma.09G223900 Glycine max HOM05D004936 ORTHO05D005977 8.3e-20 100.5 77 67.5
Ah.15g096180 Amaranthus hybridus HOM05D004936 ORTHO05D005977 1.1e-19 100.1 87 59.8
EL10Ac7g15900 Beta vulgaris HOM05D004936 ORTHO05D005977 1.1e-19 100.1 87 59.8
Aqoxy1G01790 Aquilegia oxysepala HOM05D004936 ORTHO05D005977 1.4e-19 99.8 87 63.2
A08p30450 Brassica napus HOM05D004936 ORTHO05D005977 1.4e-19 99.8 87 59.8
Carub.0001s1794 Capsella rubella HOM05D004936 ORTHO05D005977 1.8e-19 99.4 87 58.6
CARHR018890 Cardamine hirsuta HOM05D004936 ORTHO05D005977 1.8e-19 99.4 91 56.0
Ca_18959_v3 Cicer arietinum L. HOM05D000232 ORTHO05D000145 1.8e-19 99.4 78 64.1
Psat7g170640 Pisum sativum HOM05D004936 ORTHO05D005977 1.8e-19 99.4 77 64.9
Eucgr.K02762 Eucalyptus grandis HOM05D004936 ORTHO05D005977 2.4e-19 99.0 126 46.0
Glyma.12G017200 Glycine max HOM05D004936 ORTHO05D005977 2.4e-19 99.0 77 66.2
Duzib084G0838 Durio zibethinus HOM05D004936 ORTHO05D005977 3.1e-19 98.6 77 64.9
Rhsim13G0065400 Rhododendron simsii HOM05D004936 ORTHO05D005977 3.1e-19 98.6 87 58.6
BcaC07g41334 Brassica carinata HOM05D004936 ORTHO05D005977 4.1e-19 98.2 87 59.8
Cfa011755 Carpinus fangiana HOM05D000089 ORTHO05D000104 4.1e-19 98.2 75 68.0
DCAR_027925 Daucus carota HOM05D004936 ORTHO05D005977 4.1e-19 98.2 78 64.1
RcHm_v2.0_Chr5g0071211 Rosa chinensis HOM05D004936 ORTHO05D005977 5.4e-19 97.8 87 58.6
arahy.Tifrunner.gnm1.ann1.Z0D2FZ Arachis hypogaea HOM05D004936 ORTHO05D005977 7.0e-19 97.4 127 47.2
A09p59990 Brassica napus HOM05D004936 ORTHO05D005977 7.0e-19 97.4 87 59.8
C08p43440 Brassica napus HOM05D004936 ORTHO05D005977 7.0e-19 97.4 87 59.8
BolC8t51892H Brassica oleracea HOM05D004936 ORTHO05D005977 7.0e-19 97.4 87 59.8
BraA09t41369Z Brassica rapa HOM05D004936 ORTHO05D005977 7.0e-19 97.4 87 59.8
Medtr2g070380 Medicago truncatula HOM05D004936 ORTHO05D005977 7.0e-19 97.4 87 57.5
Medtr4g077950 Medicago truncatula HOM05D004936 ORTHO05D005977 7.0e-19 97.4 87 57.5
arahy.Tifrunner.gnm1.ann1.K3S5GW Arachis hypogaea HOM05D004936 ORTHO05D005977 9.2e-19 97.1 127 47.2
CiPaw.14G055600 Carya illinoinensis HOM05D004936 ORTHO05D005977 9.2e-19 97.1 77 64.9
Ciclev10029395m.g Citrus clementina HOM05D004936 ORTHO05D005977 9.2e-19 97.1 87 58.6
Cc05_g03440 Coffea canephora HOM05D004936 ORTHO05D005977 9.2e-19 97.1 76 65.8
CiPaw.13G071600 Carya illinoinensis HOM05D004936 ORTHO05D005977 1.6e-18 96.3 126 46.8
COL.COLO4_31393 Corchorus olitorius HOM05D004936 ORTHO05D005977 1.6e-18 96.3 87 58.6
Os03g0296300 Oryza sativa ssp. japonica HOM05D004936 ORTHO05D005977 1.6e-18 96.3 87 60.9
BcaB03g12974 Brassica carinata HOM05D004936 ORTHO05D005977 2.0e-18 95.9 87 56.3
BcaNung05441 Brassica carinata HOM05D004936 ORTHO05D005977 2.0e-18 95.9 87 56.3
AUR62009688 Chenopodium quinoa HOM05D004936 ORTHO05D005977 2.0e-18 95.9 87 55.2
Duzib068G0913 Durio zibethinus HOM05D004936 ORTHO05D005977 3.5e-18 95.1 87 60.9
Lj1A128T43 Lonicera japonica HOM05D004936 ORTHO05D005977 3.5e-18 95.1 78 65.4
Prupe.6G051100 Prunus persica HOM05D004936 ORTHO05D005977 3.5e-18 95.1 76 65.8
AUR62001892 Chenopodium quinoa HOM05D004936 ORTHO05D005977 4.5e-18 94.7 87 55.2
ClCG03G000300 Citrullus lanatus HOM05D000089 ORTHO05D000104 4.5e-18 94.7 127 45.7
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 4.5e-18 94.7 86 58.1
HanXRQChr14g0439861 Helianthus annuus HOM05D004936 ORTHO05D005977 4.5e-18 94.7 86 58.1
QL01p039898 Quercus lobata HOM05D004936 ORTHO05D005977 5.9e-18 94.4 77 66.2
DCAR_018221 Daucus carota HOM05D004936 ORTHO05D005977 7.8e-18 94.0 76 65.8
TPR.G39486 Trifolium pratense HOM05D004936 ORTHO05D005977 7.8e-18 94.0 76 64.5
Cpa.g.sc2.381 Carica papaya HOM05D004936 ORTHO05D005977 1.0e-17 93.6 126 44.4
Gohir.D12G270000 Gossypium hirsutum HOM05D004936 ORTHO05D005977 1.3e-17 93.2 86 57.0
Gorai.008G290300 Gossypium raimondii HOM05D004936 ORTHO05D005977 1.3e-17 93.2 86 57.0
Sed0012478 Sechium edule HOM05D004936 ORTHO05D005977 1.3e-17 93.2 76 64.5
Gohir.A12G269500 Gossypium hirsutum HOM05D004936 ORTHO05D005977 1.7e-17 92.8 86 55.8
unitig_736.g22495 Utricularia gibba HOM05D004936 ORTHO05D005977 1.7e-17 92.8 86 53.5
ATR0691G226 Amborella trichopoda HOM05D004936 ORTHO05D005977 2.3e-17 92.4 78 66.7
MD03G1061000 Malus domestica HOM05D004936 ORTHO05D005977 2.3e-17 92.4 75 65.3
CDE06G1927 Ceratophyllum demersum HOM05D004936 ORTHO05D005977 2.9e-17 92.0 87 56.3
Lj2A1091T51 Lonicera japonica HOM05D004936 ORTHO05D005977 2.9e-17 92.0 76 64.5
CANSAT54G2258 Cannabis sativa HOM05D004936 ORTHO05D005977 3.8e-17 91.7 126 46.8
SEGI_35825 Sequoiadendron giganteum HOM05D004936 ORTHO05D005977 3.8e-17 91.7 81 61.7
TPR.G26511 Trifolium pratense HOM05D004936 ORTHO05D005977 3.8e-17 91.7 86 57.0
PSO832G3733 Papaver somniferum HOM05D004936 ORTHO05D005977 5.0e-17 91.3 125 44.8
PGR044G1703 Punica granatum HOM05D004936 ORTHO05D005977 5.0e-17 91.3 76 60.5
Zm00001eb013690 Zea mays HOM05D004936 ORTHO05D005977 5.0e-17 91.3 87 57.5
FvH4_3g39470 Fragaria vesca HOM05D004936 ORTHO05D005977 6.6e-17 90.9 105 49.5
FAN11G2192 Fragaria x ananassa HOM05D004936 ORTHO05D005977 6.6e-17 90.9 105 49.5
FAN16G3562 Fragaria x ananassa HOM05D004936 ORTHO05D005977 6.6e-17 90.9 105 49.5
FAN21G3073 Fragaria x ananassa HOM05D004936 ORTHO05D005977 6.6e-17 90.9 105 49.5
FAN25G3861 Fragaria x ananassa HOM05D004936 ORTHO05D005977 6.6e-17 90.9 105 49.5
HPP92_003695 Vanilla planifolia HOM05D004936 ORTHO05D005977 6.6e-17 90.9 76 65.8
CANSAT21G2196 Cannabis sativa HOM05D004936 ORTHO05D005977 8.6e-17 90.5 80 58.8
Lalb_Chr03g0024401 Lupinus albus HOM05D004936 ORTHO05D005977 8.6e-17 90.5 77 63.6
Atru.chr3.4141 Acer truncatum HOM05D004936 ORTHO05D005977 1.1e-16 90.1 87 56.3
Thecc.03G057900 Theobroma cacao HOM05D004936 ORTHO05D005977 1.1e-16 90.1 76 63.2
MELO3C020507.2 Cucumis melo HOM05D004936 ORTHO05D005977 1.9e-16 89.4 76 60.5
PSO210G4578 Papaver somniferum HOM05D004936 ORTHO05D005977 1.9e-16 89.4 125 44.0
ECA238G2024 Erigeron canadensis HOM05D004936 ORTHO05D005977 1.2e-15 86.7 78 56.4
CsaV3_1G036620 Cucumis sativus L. HOM05D004936 ORTHO05D005977 1.6e-15 86.3 87 54.0
TWI75G1184 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 2.8e-15 85.5 77 61.0
Mapoly0036s0081 Marchantia polymorpha HOM05D004936 ORTHO05D005977 1.0e-14 83.6 86 51.2
TWI79G0082 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 1.4e-14 83.2 77 58.4
Oeu023392.2 Olea europaea HOM05D004936 ORTHO05D005977 3.0e-14 82.0 94 46.8
Nn5g31489 Nelumbo nucifera HOM05D004936 ORTHO05D005977 8.9e-14 80.5 71 60.6
Nn2g10980 Nelumbo nucifera HOM05D004936 ORTHO05D005977 1.5e-13 79.7 70 61.4
MD11G1063700 Malus domestica HOM05D004936 ORTHO05D005977 2.0e-13 79.3 83 54.2
Nn6g34585 Nelumbo nucifera HOM05D004936 ORTHO05D005977 2.6e-13 79.0 72 59.7
SMO353G0176 Selaginella moellendorffii HOM05D004936 ORTHO05D005977 2.2e-12 75.9 86 47.7
Zm00001eb223780 Zea mays HOM05D004936 ORTHO05D005977 4.9e-12 74.7 70 60.0
Zm00001eb130910 Zea mays HOM05D004936 ORTHO05D005977 1.9e-11 72.8 70 58.6
AagrBONN_evm.TU.Sc2ySwM_344.4538 Anthoceros agrestis HOM05D004936 ORTHO05D005977 6.0e-10 67.8 74 51.4
Dinv09657 Davidia involucrata HOM05D004936 ORTHO05D005977 1.0e-09 67.0 53 66.0
AT3G10110 Arabidopsis thaliana HOM05D004936 ORTHO05D005977 3.9e-09 65.1 48 62.5
Pp3c12_17590 Physcomitrium patens HOM05D004936 ORTHO05D005977 5.0e-09 64.7 86 40.7
TAR633G2185 Trochodendron aralioides HOM05D004936 ORTHO05D005977 5.6e-08 61.2 37 78.4
CBR_g19040 Chara braunii HOM05D004936 ORTHO05D005977 3.6e-07 58.5 87 39.1
TPR.G21432 Trifolium pratense HOM05D004936 ORTHO05D005977 1.4e-06 56.6 80 43.8
Sed0020346 Sechium edule HOM05D004936 ORTHO05D005977 1.8e-06 56.2 68 48.5


User provided reference genes

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