Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.1e-223 779.6 393 100.0
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.0e-200 701.0 427 85.9
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 5.5e-199 697.6 415 86.3
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 2.1e-198 695.7 415 85.8
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.7e-198 695.3 377 91.5
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 3.0e-197 691.8 415 85.8
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 6.8e-197 690.6 385 90.1
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 1.2e-193 679.9 377 88.6
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 7.2e-191 670.6 377 87.3
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 6.1e-190 667.5 415 81.4
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 3.0e-189 665.2 394 85.0
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 4.0e-189 664.8 377 86.2
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 4.0e-189 664.8 415 81.2
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.7e-187 659.4 380 85.8
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 3.7e-187 658.3 415 80.2
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 1.8e-186 656.0 383 83.8
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.6e-185 652.9 416 79.1
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 4.5e-185 651.4 415 79.8
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 5.9e-185 651.0 415 80.0
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 7.7e-185 650.6 412 79.9
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 7.7e-185 650.6 415 80.0
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 7.7e-185 650.6 415 79.0
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 1.0e-184 650.2 414 79.7
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 2.3e-184 649.0 414 79.5
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 2.3e-184 649.0 419 78.5
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 8.6e-184 647.1 415 79.8
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.5e-183 646.4 424 77.1
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.9e-183 646.0 415 79.0
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 1.9e-183 646.0 415 80.0
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 5.6e-183 644.4 415 78.6
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 7.3e-183 644.0 412 78.9
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.5e-183 643.7 419 77.6
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 1.2e-182 643.3 424 76.2
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.1e-182 642.5 415 77.8
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 2.8e-182 642.1 412 78.6
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 2.8e-182 642.1 415 77.6
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.7e-182 641.3 415 77.8
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 6.1e-182 641.0 415 77.1
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 6.1e-182 641.0 414 77.3
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.0e-182 640.6 415 77.8
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 8.0e-182 640.6 415 78.1
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 1.4e-181 639.8 415 77.3
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.4e-181 639.8 415 78.1
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.8e-181 639.4 415 76.9
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 1.8e-181 639.4 415 78.3
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 5.2e-181 637.9 415 77.6
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 2.0e-180 636.0 415 78.6
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 2.0e-180 636.0 415 76.9
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 2.0e-180 636.0 415 77.1
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 5.7e-180 634.4 416 76.7
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 7.5e-180 634.0 415 77.3
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 9.8e-180 633.6 416 76.7
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 1.3e-179 633.3 373 84.5
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 1.3e-179 633.3 415 77.1
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.3e-179 633.3 415 77.1
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 2.2e-179 632.5 415 76.9
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 2.2e-179 632.5 415 76.9
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 2.2e-179 632.5 415 77.8
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 2.9e-179 632.1 415 76.9
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 3.7e-179 631.7 415 77.3
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 6.4e-179 630.9 415 77.1
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 8.3e-179 630.6 415 76.9
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 1.4e-178 629.8 415 79.8
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 1.8e-178 629.4 415 77.6
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 2.4e-178 629.0 424 77.4
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.2e-178 628.6 429 75.1
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 3.2e-178 628.6 385 84.4
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 4.1e-178 628.2 426 75.8
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 9.2e-178 627.1 415 77.3
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 9.2e-178 627.1 415 77.3
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 9.2e-178 627.1 415 77.6
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 1.2e-177 626.7 415 77.3
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 1.2e-177 626.7 415 77.3
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 1.2e-177 626.7 415 77.3
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 1.2e-177 626.7 424 76.9
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 1.6e-177 626.3 424 76.9
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 1.6e-177 626.3 415 77.1
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 1.6e-177 626.3 415 76.1
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 2.0e-177 625.9 415 78.1
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 2.7e-177 625.5 415 75.7
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 2.7e-177 625.5 411 76.9
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 3.5e-177 625.2 415 77.1
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 3.5e-177 625.2 415 76.1
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 5.9e-177 624.4 415 76.1
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 5.9e-177 624.4 415 77.1
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 5.9e-177 624.4 415 75.9
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 1.0e-176 623.6 416 76.7
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 1.0e-176 623.6 415 76.9
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 1.3e-176 623.2 413 78.2
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 1.3e-176 623.2 439 73.8
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 1.7e-176 622.9 413 76.3
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 2.3e-176 622.5 414 76.8
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 2.3e-176 622.5 415 76.4
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 3.0e-176 622.1 412 76.0
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 8.6e-176 620.5 441 71.9
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 1.1e-175 620.2 411 75.9
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 1.1e-175 620.2 415 75.4
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 4.3e-175 618.2 420 73.1
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 1.4e-173 613.2 411 75.4
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.8e-173 612.8 415 73.7
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 2.6e-172 609.0 461 70.3
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 2.2e-171 605.9 413 73.1
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 1.9e-170 602.8 413 73.4
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 1.7e-168 596.3 424 71.0
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 1.5e-167 593.2 424 70.8
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.3e-167 591.7 424 70.0
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 6.8e-165 584.3 388 76.3
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 5.8e-164 581.3 412 71.4
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.3e-163 580.1 414 70.0
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 1.7e-163 579.7 412 69.7
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 2.9e-163 578.9 412 71.1
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.4e-163 577.8 383 75.7
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 1.6e-161 573.2 411 72.0
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 1.7e-160 569.7 611 53.5
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.8e-157 559.7 415 69.6
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 8.9e-157 557.4 415 66.7
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 7.6e-156 554.3 415 66.7
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 1.3e-155 553.5 415 68.0
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.4e-155 550.8 412 67.5
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.2e-154 548.9 417 66.7
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 1.2e-153 547.0 415 65.8
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 6.0e-153 544.7 412 66.7
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.8e-150 535.8 412 68.9
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 2.8e-150 535.8 410 67.8
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 5.2e-149 531.6 410 65.9
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 4.4e-148 528.5 415 63.1
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 2.4e-146 522.7 430 63.7
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 2.4e-146 522.7 353 73.7
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.2e-146 521.9 415 64.3
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 2.3e-144 516.2 292 86.6
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 6.6e-144 514.6 354 73.4
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 1.5e-143 513.5 292 84.6
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.3e-143 511.9 413 64.9
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 1.6e-142 510.0 292 84.9
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.0e-141 505.4 419 61.3
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 6.9e-141 504.6 292 85.3
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 2.6e-140 502.7 292 84.2
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 1.9e-135 486.5 409 57.9
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.4e-133 479.6 407 61.4
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 1.0e-128 464.2 312 75.6
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.0e-123 447.6 375 63.2
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 2.5e-119 433.0 413 55.0
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.3e-111 406.0 281 74.0
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.8e-110 402.1 426 52.3
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.7e-107 393.7 286 69.6
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 3.0e-104 382.9 252 74.2
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 6.7e-104 381.7 432 50.9
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 6.7e-96 355.1 424 46.0
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 7.7e-92 341.7 237 75.5
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.3e-91 340.9 466 44.6
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 4.5e-84 315.8 427 43.3
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.6e-81 307.4 199 77.9
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 2.3e-72 276.9 404 40.6
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.5e-71 274.2 239 61.5
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 2.8e-70 270.0 168 78.0
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 4.7e-65 252.7 165 76.4
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 1.4e-64 251.1 145 80.7
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 3.0e-59 233.4 171 70.2
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.1e-56 224.9 243 55.6
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 1.5e-55 221.1 146 75.3
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 2.2e-54 217.2 158 71.5
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 3.5e-36 156.8 96 80.2
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 2.0e-31 141.0 87 79.3
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 5.8e-31 139.4 87 78.2
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 6.4e-30 136.0 126 61.1
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 5.6e-26 122.9 213 35.7
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 1.0e-19 102.1 58 81.0
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.0e-19 102.1 192 35.9
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 8.1e-17 92.4 166 38.0
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 1.3e-14 85.1 47 89.4
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.6e-12 78.2 54 72.2
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 8.7e-11 72.4 48 75.0
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 2.5e-10 70.9 98 43.9
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 4.3e-10 70.1 74 51.4
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 2.8e-09 67.4 46 67.4
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 8.2e-09 65.9 32 87.5
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 1.1e-08 65.5 49 63.3
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 5.3e-08 63.2 35 77.1
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 5.3e-08 63.2 120 38.3
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 1.2e-07 62.0 38 81.6
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 1.5e-07 61.6 30 90.0
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 7.6e-07 59.3 44 61.4


User provided reference genes

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