Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.0e-198 695.7 370 100.0
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.5e-193 679.5 376 95.5
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 5.6e-185 651.0 370 90.3
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 9.9e-182 640.2 379 90.8
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 8.3e-181 637.1 379 90.8
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.4e-180 636.3 380 90.3
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.8e-154 549.7 378 74.6
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 5.1e-154 548.1 370 73.2
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 5.1e-154 548.1 331 90.0
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.1e-153 547.0 379 74.4
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.8e-152 541.6 380 73.9
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 6.2e-152 541.2 381 73.8
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 3.1e-151 538.9 379 70.7
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 5.3e-151 538.1 379 71.5
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 5.8e-150 534.6 379 72.3
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 2.2e-149 532.7 379 70.7
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 2.9e-149 532.3 379 72.6
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 4.9e-149 531.6 368 72.6
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 6.5e-149 531.2 380 71.3
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 6.5e-149 531.2 378 70.6
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 7.1e-148 527.7 377 71.1
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 4.6e-147 525.0 380 70.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 3.0e-146 522.3 379 70.2
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 4.3e-145 518.5 379 69.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 5.7e-145 518.1 379 69.7
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 2.8e-144 515.8 377 69.5
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 6.2e-144 514.6 379 68.6
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 8.2e-144 514.2 383 69.7
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 2.4e-143 512.7 379 67.8
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.4e-143 512.7 379 68.1
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.4e-143 512.7 380 68.9
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 3.1e-143 512.3 404 66.1
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 4.0e-143 511.9 379 68.6
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 5.3e-143 511.5 380 68.4
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.5e-142 510.0 432 62.7
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.0e-142 509.6 380 68.2
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 2.0e-142 509.6 380 67.6
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.6e-142 509.2 379 68.1
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 5.8e-142 508.1 383 67.6
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.0e-141 507.3 379 69.4
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.7e-141 506.5 380 66.8
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.8e-141 505.4 383 67.1
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 5.0e-141 505.0 403 65.0
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 6.5e-141 504.6 409 64.3
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.4e-140 503.4 389 68.6
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.5e-140 502.7 379 68.6
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 3.2e-140 502.3 385 67.3
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 5.5e-140 501.5 380 67.1
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.2e-139 500.4 379 66.8
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.2e-139 500.4 379 66.0
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.1e-139 499.6 399 64.2
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 2.1e-139 499.6 407 63.9
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 2.1e-139 499.6 432 63.4
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 6.1e-139 498.0 380 66.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.0e-138 497.3 362 71.5
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 2.3e-138 496.1 380 66.8
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 3.9e-138 495.4 379 65.7
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 5.1e-138 495.0 434 60.6
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 6.7e-138 494.6 379 65.7
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.5e-137 493.4 380 67.1
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.5e-137 492.7 385 64.4
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.3e-136 490.3 379 66.0
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.1e-135 485.7 373 65.4
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 3.1e-135 485.7 379 64.6
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.5e-134 483.4 379 64.4
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.5e-134 481.9 379 64.9
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 4.5e-134 481.9 379 64.1
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 7.7e-134 481.1 379 64.6
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 1.0e-133 480.7 384 65.1
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 1.7e-133 479.9 379 64.1
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-133 479.9 375 64.5
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.2e-133 479.6 380 65.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.9e-133 479.2 379 67.3
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 8.5e-133 477.6 379 64.1
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.1e-132 477.2 377 63.9
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.4e-132 476.9 375 64.0
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 2.7e-131 472.6 379 64.1
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 4.6e-131 471.9 380 64.5
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.9e-131 471.1 382 63.6
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 7.9e-131 471.1 356 68.3
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.0e-130 470.7 379 63.3
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.4e-130 470.3 380 64.5
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 2.3e-130 469.5 380 64.2
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.1e-129 467.2 380 62.9
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 2.5e-129 466.1 380 63.4
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 2.5e-129 466.1 380 63.4
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 5.7e-129 464.9 382 62.8
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.2e-128 463.0 370 62.7
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.1e-127 458.8 406 58.9
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 6.9e-127 458.0 386 61.1
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 3.8e-125 452.2 455 53.6
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 5.5e-124 448.4 370 63.0
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 2.7e-123 446.0 388 60.8
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 4.7e-123 445.3 397 59.2
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.8e-122 443.4 322 69.3
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 6.5e-117 424.9 382 58.1
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 4.2e-116 422.2 379 58.3
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.6e-115 420.2 378 59.8
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 8.0e-115 417.9 378 58.7
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 2.3e-114 416.4 384 58.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 5.9e-110 401.7 273 75.8
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 5.2e-106 388.7 413 54.0
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 5.4e-103 378.6 277 70.0
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 7.7e-102 374.8 387 51.7
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 3.1e-95 352.8 388 51.8
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 4.6e-70 269.2 245 57.6
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 7.3e-68 261.9 413 38.7
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.2e-63 245.0 158 75.3
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.3e-61 240.4 158 74.7
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-60 238.0 161 73.3
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.4e-58 231.1 460 36.3
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.6e-49 200.3 161 64.0
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.9e-48 196.8 149 66.4
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 4.5e-41 172.9 340 34.7
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.3e-37 160.6 111 70.3
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.3e-35 154.8 137 53.3
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 6.2e-35 152.5 113 69.0
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 3.1e-34 150.2 102 66.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.1e-31 141.7 109 68.8
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 5.5e-31 139.4 103 63.1
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 6.7e-21 105.9 84 63.1
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.3e-19 101.7 95 57.9
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.8e-11 73.9 123 38.2
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 5.9e-09 66.2 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.3e-08 65.1 39 76.9


User provided reference genes

Program Settings