Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001263g0070 Nicotiana tabacum HOM05D003486 ORTHO05D004600 3.2e-71 271.6 129 100.0
Solyc11g044980.1 Solanum lycopersicum HOM05D003486 ORTHO05D004600 7.5e-36 154.1 82 87.8
Nitab4.5_0001940g0060 Nicotiana tabacum HOM05D003486 ORTHO05D004600 9.8e-36 153.7 89 85.4
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.8e-34 149.4 76 90.8
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 2.3e-24 115.9 76 72.4
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 2.9e-24 115.5 76 73.7
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 5.0e-24 114.8 76 71.1
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 5.0e-24 114.8 76 71.1
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 6.6e-24 114.4 76 73.7
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 6.6e-24 114.4 76 73.7
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 1.1e-23 113.6 76 72.4
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 1.1e-23 113.6 76 71.1
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 2.5e-23 112.5 76 68.4
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 4.3e-23 111.7 76 68.4
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.3e-23 111.7 76 72.4
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.3e-23 111.7 76 72.4
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 4.3e-23 111.7 76 72.4
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 5.6e-23 111.3 76 72.4
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 7.3e-23 110.9 76 71.1
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 9.5e-23 110.5 76 71.1
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 9.5e-23 110.5 76 68.4
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 1.2e-22 110.2 76 69.7
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.2e-22 110.2 76 69.7
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.2e-22 110.2 76 69.7
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 1.2e-22 110.2 76 69.7
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.2e-22 110.2 75 72.0
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.6e-22 109.8 78 71.8
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 1.6e-22 109.8 76 69.7
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 2.1e-22 109.4 76 71.1
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 2.1e-22 109.4 76 65.8
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 2.8e-22 109.0 76 69.7
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 2.8e-22 109.0 75 69.3
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 2.8e-22 109.0 76 67.1
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 2.8e-22 109.0 76 71.1
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 3.6e-22 108.6 76 67.1
Hma1.2p1_0847F.1_g227880 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 3.6e-22 108.6 76 69.7
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 3.6e-22 108.6 76 69.7
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 4.7e-22 108.2 76 71.1
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 4.7e-22 108.2 76 69.7
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 4.7e-22 108.2 76 69.7
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 4.7e-22 108.2 76 71.1
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 4.7e-22 108.2 76 71.1
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 6.1e-22 107.8 76 71.1
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 1.4e-21 106.7 87 63.2
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 1.4e-21 106.7 76 68.4
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 1.4e-21 106.7 76 65.8
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.8e-21 106.3 76 68.4
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 4.0e-21 105.1 76 65.8
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 5.2e-21 104.8 76 67.1
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 6.8e-21 104.4 78 69.2
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 8.9e-21 104.0 76 67.1
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 1.2e-20 103.6 76 64.5
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 1.2e-20 103.6 76 67.1
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 3.4e-20 102.1 76 64.5
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 3.4e-20 102.1 76 64.5
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 4.4e-20 101.7 76 65.8
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 9.8e-20 100.5 76 65.8
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 9.8e-20 100.5 76 68.4
Nn1g09603 Nelumbo nucifera HOM05D003486 ORTHO05D004600 1.3e-19 100.1 76 64.5
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 1.7e-19 99.8 76 64.5
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 1.7e-19 99.8 76 64.5
ClCG08G004750 Citrullus lanatus HOM05D003486 ORTHO05D004600 1.7e-19 99.8 76 64.5
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 1.7e-19 99.8 76 64.5
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 1.7e-19 99.8 77 64.9
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 1.7e-19 99.8 76 64.5
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 2.9e-19 99.0 76 64.5
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 2.9e-19 99.0 76 63.2
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 2.9e-19 99.0 76 64.5
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 2.9e-19 99.0 76 64.5
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 2.9e-19 99.0 76 64.5
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 3.7e-19 98.6 79 60.8
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 3.7e-19 98.6 80 67.5
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 6.4e-19 97.8 76 60.5
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 6.4e-19 97.8 76 63.2
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 6.4e-19 97.8 76 63.2
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 6.4e-19 97.8 76 63.2
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 8.3e-19 97.4 76 63.2
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 3.2e-18 95.5 76 64.5
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 3.2e-18 95.5 76 61.8
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 4.1e-18 95.1 102 52.9
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 7.0e-18 94.4 76 64.5
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 1.3e-16 90.1 76 60.5
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 6.6e-16 87.8 76 64.5
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.9e-15 86.3 76 57.9
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 5.2e-13 78.2 76 56.6
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 8.9e-13 77.4 77 54.5
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 1.2e-12 77.0 84 51.2
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 4.9e-11 71.6 78 52.6
TPR.G8787 Trifolium pratense HOM05D003486 ORTHO05D004600 1.1e-10 70.5 76 51.3
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 1.9e-10 69.7 81 51.9
Cpa.g.sc9.279 Carica papaya HOM05D003486 ORTHO05D004600 1.9e-07 59.7 57 54.4
CiPaw.01G100100 Carya illinoinensis HOM05D003486 ORTHO05D004600 9.5e-07 57.4 38 71.1
BcaC02g10121 Brassica carinata HOM05D003486 ORTHO05D004600 2.8e-06 55.8 91 39.6
Dinv17546 Davidia involucrata HOM05D003486 ORTHO05D004600 4.7e-06 55.1 80 43.8
MBI11_g04859_MAGBIO Magnolia biondii HOM05D003486 ORTHO05D004600 6.2e-06 54.7 59 49.2


User provided reference genes

Program Settings