Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001263g0040 Nicotiana tabacum HOM05D003486 ORTHO05D004600 1.9e-68 262.3 127 100.0
Peaxi162Scf00126g00124 Petunia axillaris HOM05D003486 ORTHO05D004600 1.1e-50 203.4 105 93.3
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 5.2e-50 201.1 110 92.7
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 1.1e-42 176.8 110 76.4
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 2.4e-42 175.6 110 79.1
Lj6C53T8 Lonicera japonica HOM05D003486 ORTHO05D004600 9.0e-42 173.7 110 80.0
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 2.6e-41 172.2 110 78.2
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 1.3e-40 169.9 109 78.9
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.7e-40 169.5 112 75.0
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.7e-40 169.5 110 78.2
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 2.2e-40 169.1 110 74.5
CiPaw.01G100100 Carya illinoinensis HOM05D003486 ORTHO05D004600 2.9e-40 168.7 110 76.4
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 2.9e-40 168.7 110 74.5
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 2.9e-40 168.7 110 79.1
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 3.8e-40 168.3 110 76.4
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 4.9e-40 167.9 110 74.5
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 6.4e-40 167.5 110 76.4
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 6.4e-40 167.5 110 76.4
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 1.9e-39 166.0 110 77.3
Hma1.2p1_0847F.1_g227890 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 2.4e-39 165.6 110 77.3
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 3.2e-39 165.2 110 72.7
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 3.2e-39 165.2 110 75.5
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 7.1e-39 164.1 110 72.7
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.2e-38 163.3 112 73.2
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 1.2e-38 163.3 110 74.5
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.2e-38 163.3 110 73.6
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 1.2e-38 163.3 110 73.6
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 1.6e-38 162.9 111 75.7
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 2.1e-38 162.5 110 71.8
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 2.7e-38 162.2 110 73.6
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 6.0e-38 161.0 110 75.5
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 7.9e-38 160.6 110 71.8
Eucgr.A00277 Eucalyptus grandis HOM05D003486 ORTHO05D004600 7.9e-38 160.6 110 72.7
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 2.3e-37 159.1 109 73.4
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 3.0e-37 158.7 110 72.7
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 3.0e-37 158.7 110 70.9
MBI11_g04859_MAGBIO Magnolia biondii HOM05D003486 ORTHO05D004600 3.9e-37 158.3 110 71.8
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 1.1e-36 156.8 110 71.8
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 1.5e-36 156.4 110 70.9
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.5e-36 156.4 110 70.0
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 2.5e-36 155.6 110 70.9
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 3.3e-36 155.2 105 72.4
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 3.3e-36 155.2 112 70.5
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 4.3e-36 154.8 110 70.0
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 5.6e-36 154.5 112 69.6
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 5.6e-36 154.5 110 70.0
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 5.6e-36 154.5 110 69.1
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 5.6e-36 154.5 110 72.7
VMungo1127G1248 Vigna mungo HOM05D003486 ORTHO05D004600 7.4e-36 154.1 112 68.8
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 9.6e-36 153.7 110 69.1
Haze_01507 Corylus avellana HOM05D003486 ORTHO05D004600 1.3e-35 153.3 107 71.0
ClCG08G004770 Citrullus lanatus HOM05D003486 ORTHO05D004600 1.6e-35 152.9 106 68.9
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 2.1e-35 152.5 110 70.0
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.1e-35 152.5 110 69.1
Nn1g09605 Nelumbo nucifera HOM05D003486 ORTHO05D004600 2.8e-35 152.1 106 70.8
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 4.8e-35 151.4 110 68.2
Ciclev10023270m.g Citrus clementina HOM05D003486 ORTHO05D004600 4.8e-35 151.4 96 72.9
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 6.2e-35 151.0 110 68.2
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 8.1e-35 150.6 110 70.0
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 1.1e-34 150.2 110 71.8
Cpa.g.sc9.281 Carica papaya HOM05D003486 ORTHO05D004600 1.4e-34 149.8 110 71.8
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.8e-34 149.4 110 67.3
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.4e-34 149.1 110 68.2
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 5.3e-34 147.9 112 68.8
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 5.3e-34 147.9 110 70.9
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 6.9e-34 147.5 112 67.9
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 1.2e-33 146.7 112 68.8
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 1.2e-33 146.7 112 68.8
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 1.2e-33 146.7 112 68.8
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 1.2e-33 146.7 112 68.8
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 1.5e-33 146.4 106 68.9
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 2.0e-33 146.0 112 67.9
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 2.0e-33 146.0 112 68.8
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 2.6e-33 145.6 112 67.9
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 2.6e-33 145.6 112 67.9
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 2.6e-33 145.6 112 67.9
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 2.6e-33 145.6 110 68.2
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 3.4e-33 145.2 110 64.5
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 3.4e-33 145.2 110 68.2
Nitab4.5_0001940g0050 Nicotiana tabacum HOM05D003486 ORTHO05D004600 3.4e-33 145.2 73 95.9
CARHR169810 Cardamine hirsuta HOM05D003486 ORTHO05D004600 5.8e-33 144.4 112 67.0
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.9e-31 139.4 119 61.3
Os04g0492600 Oryza sativa ssp. japonica HOM05D003486 ORTHO05D004600 1.0e-29 133.7 110 62.7
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 3.0e-29 132.1 106 64.2
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.5e-28 129.8 110 62.7
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 2.5e-28 129.0 114 62.3
CDE02G0726 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 9.6e-28 127.1 95 66.3
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 1.1e-23 113.6 109 59.6
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 1.0e-21 107.1 106 54.7
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 5.1e-21 104.8 110 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 9.7e-20 100.5 102 52.0
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 1.1e-18 97.1 131 45.0
Ca_28543_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 5.5e-15 84.7 66 57.6
Cre01.g038000 Chlamydomonas reinhardtii HOM05D003486 ORTHO05D004600 1.5e-09 66.6 111 33.3
MCO05G349 Micromonas commoda HOM05D003486 ORTHO05D004600 1.2e-06 57.0 108 33.3


User provided reference genes

Program Settings