Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001263g0030 Nicotiana tabacum HOM05D003486 ORTHO05D004600 2.9e-44 181.4 87 100.0
Nitab4.5_0001940g0010 Nicotiana tabacum HOM05D003486 ORTHO05D004600 9.5e-43 176.4 87 96.6
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.1e-35 152.9 81 85.2
CAN.G336.8 Capsicum annuum HOM05D003486 ORTHO05D004600 4.3e-35 151.0 79 88.6
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 4.4e-32 141.0 81 79.0
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 9.8e-32 139.8 78 83.3
Hma1.2p1_0847F.1_g227860 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 1.7e-31 139.0 81 77.8
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 3.7e-31 137.9 81 77.8
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 1.1e-30 136.3 81 75.3
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 7.0e-30 133.7 78 79.5
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 2.1e-29 132.1 81 74.1
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 3.5e-29 131.3 78 78.2
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 6.0e-29 130.6 81 76.5
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 6.0e-29 130.6 81 74.1
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 7.8e-29 130.2 81 74.1
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 1.0e-28 129.8 77 77.9
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 2.3e-28 128.6 80 77.5
DCAR_023939 Daucus carota HOM05D003486 ORTHO05D004600 3.9e-28 127.9 83 69.9
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 3.9e-28 127.9 80 73.8
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 6.6e-28 127.1 78 76.9
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 6.6e-28 127.1 80 72.5
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.1e-27 126.3 81 71.6
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 1.5e-27 125.9 78 74.4
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 4.3e-27 124.4 78 74.4
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 7.3e-27 123.6 81 70.4
GSVIVG01010755001 Vitis vinifera HOM05D003486 ORTHO05D004600 7.3e-27 123.6 78 73.1
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 1.2e-26 122.9 78 70.5
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 1.2e-26 122.9 81 69.1
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.2e-26 122.9 78 74.4
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 2.1e-26 122.1 81 72.8
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 2.1e-26 122.1 78 70.5
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 2.1e-26 122.1 78 75.6
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 2.1e-26 122.1 81 69.1
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 2.1e-26 122.1 81 70.4
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 2.1e-26 122.1 80 72.5
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 2.8e-26 121.7 78 71.8
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 3.6e-26 121.3 78 73.1
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 4.7e-26 120.9 82 70.7
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 6.2e-26 120.6 79 72.2
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 6.2e-26 120.6 78 70.5
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 6.2e-26 120.6 78 70.5
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 6.2e-26 120.6 81 67.9
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 6.2e-26 120.6 81 66.7
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 8.1e-26 120.2 78 69.2
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.1e-25 119.8 78 69.2
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.1e-25 119.8 78 71.8
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.1e-25 119.8 78 66.7
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 1.4e-25 119.4 82 70.7
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 1.8e-25 119.0 82 69.5
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 3.1e-25 118.2 84 69.0
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 3.1e-25 118.2 82 68.3
Haze_01510 Corylus avellana HOM05D003486 ORTHO05D004600 4.0e-25 117.9 84 67.9
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 5.2e-25 117.5 82 69.5
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 5.2e-25 117.5 82 68.3
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 6.8e-25 117.1 77 70.1
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 6.8e-25 117.1 82 68.3
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 8.9e-25 116.7 82 67.1
FAN07G1795 Fragaria x ananassa HOM05D003486 ORTHO05D004600 8.9e-25 116.7 80 68.8
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 2.6e-24 115.2 77 68.8
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 3.4e-24 114.8 80 67.5
Nn1g09587 Nelumbo nucifera HOM05D003486 ORTHO05D004600 5.8e-24 114.0 77 71.4
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 7.5e-24 113.6 85 68.2
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 7.5e-24 113.6 85 68.2
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 7.5e-24 113.6 85 68.2
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 7.5e-24 113.6 85 68.2
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 1.7e-23 112.5 76 68.4
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.2e-23 112.1 80 61.2
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.1e-22 109.8 78 65.4
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 1.4e-22 109.4 78 64.1
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 3.2e-22 108.2 78 62.8
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 4.1e-22 107.8 77 68.8
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 4.1e-22 107.8 77 68.8
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 1.3e-20 102.8 77 63.6
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 3.9e-20 101.3 115 47.8
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 2.5e-19 98.6 62 72.6
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 3.3e-19 98.2 78 61.5
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.2e-18 96.3 78 60.3
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.4e-17 92.8 76 57.9
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.4e-17 92.8 76 57.9
HPP92_023710 Vanilla planifolia HOM05D003486 ORTHO05D004600 1.8e-17 92.4 78 59.0
Os04g0492500 Oryza sativa ssp. japonica HOM05D003486 ORTHO05D004600 5.2e-17 90.9 78 57.7
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.2e-15 85.5 73 54.8
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 2.9e-15 85.1 49 79.6
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 2.9e-15 85.1 49 79.6
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 4.9e-15 84.3 80 52.5
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 1.4e-14 82.8 78 56.4
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 9.2e-14 80.1 55 65.5
SEGI_39220 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 3.9e-12 74.7 59 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 1.1e-11 73.2 78 48.7
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 1.1e-09 66.6 81 48.1
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 3.1e-09 65.1 81 42.0
Ah.07g202020 Amaranthus hybridus HOM05D003486 ORTHO05D004600 2.0e-08 62.4 63 49.2


User provided reference genes

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