Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001259g0120 Nicotiana tabacum HOM05D005641 ORTHO05D007953 1.7e-81 305.8 144 100.0
Nitab4.5_0012285g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 7.2e-72 273.9 136 94.1
PGSC0003DMG400005454 Solanum tuberosum HOM05D005641 ORTHO05D007953 2.9e-65 251.9 136 86.0
Sopen10g020870 Solanum pennellii HOM05D005641 ORTHO05D007953 1.6e-63 246.1 137 85.4
CAN.G1.68 Capsicum annuum HOM05D005641 ORTHO05D007953 3.0e-62 241.9 136 82.4
Solyc10g049650.3 Solanum lycopersicum HOM05D005641 ORTHO05D007953 8.9e-62 240.4 137 83.9
Peaxi162Scf00083g00163 Petunia axillaris HOM05D005641 ORTHO05D007953 1.4e-59 233.0 138 77.5
Dinv42223 Davidia involucrata HOM05D005641 ORTHO05D007953 6.1e-55 217.6 136 72.8
Lsat_1_v5_gn_9_112460 Lactuca sativa HOM05D005641 ORTHO05D007953 8.9e-54 213.8 130 71.5
SGA_v2.0_scaffold337G49200 Striga asiatica HOM05D005641 ORTHO05D007953 4.4e-53 211.5 132 73.5
Thecc.02G114700 Theobroma cacao HOM05D005641 ORTHO05D007953 5.8e-53 211.1 146 67.1
CiPaw.06G166900 Carya illinoinensis HOM05D005641 ORTHO05D007953 3.7e-52 208.4 141 67.4
COL.COLO4_32537 Corchorus olitorius HOM05D005641 ORTHO05D007953 8.3e-52 207.2 135 68.1
Oeu037265.1 Olea europaea HOM05D005641 ORTHO05D007953 1.1e-51 206.8 135 71.9
QL02p069388 Quercus lobata HOM05D005641 ORTHO05D007953 1.4e-51 206.5 141 67.4
MSTRG.5328 Avicennia marina HOM05D005641 ORTHO05D007953 2.4e-51 205.7 135 68.1
vmacro19527 Vaccinium macrocarpon HOM05D005641 ORTHO05D007953 7.0e-51 204.1 134 71.6
GSVIVG01037858001 Vitis vinifera HOM05D005641 ORTHO05D007953 1.2e-50 203.4 133 72.9
PGR042G1829 Punica granatum HOM05D005641 ORTHO05D007953 2.0e-50 202.6 135 68.9
Atru.chr5.2402 Acer truncatum HOM05D005641 ORTHO05D007953 2.7e-50 202.2 132 69.7
Ciclev10029502m.g Citrus clementina HOM05D005641 ORTHO05D007953 2.7e-50 202.2 132 71.2
Haze_10242 Corylus avellana HOM05D005641 ORTHO05D007953 2.7e-50 202.2 115 77.4
Duzib052G0024 Durio zibethinus HOM05D005641 ORTHO05D007953 3.5e-50 201.8 138 68.1
Hma1.2p1_1023F.1_g248880 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 3.5e-50 201.8 130 70.8
RcHm_v2.0_Chr6g0253411 Rosa chinensis HOM05D005641 ORTHO05D007953 3.5e-50 201.8 135 69.6
Eucgr.G01263 Eucalyptus grandis HOM05D005641 ORTHO05D007953 6.0e-50 201.1 140 65.7
Manes.10G080400 Manihot esculenta HOM05D005641 ORTHO05D007953 7.8e-50 200.7 138 68.1
ECA240G0483 Erigeron canadensis HOM05D005641 ORTHO05D007953 1.0e-49 200.3 132 68.9
Migut.O00678 Erythranthe guttata HOM05D005641 ORTHO05D007953 1.0e-49 200.3 135 65.9
HanXRQChr03g0069981 Helianthus annuus HOM05D005641 ORTHO05D007953 1.7e-49 199.5 127 69.3
MD05G1097100 Malus domestica HOM05D005641 ORTHO05D007953 2.3e-49 199.1 137 68.6
Gorai.005G232800 Gossypium raimondii HOM05D005641 ORTHO05D007953 3.9e-49 198.4 134 70.9
Migut.N01150 Erythranthe guttata HOM05D005641 ORTHO05D007953 5.0e-49 198.0 135 65.2
Ah.09g231980 Amaranthus hybridus HOM05D005641 ORTHO05D007953 6.6e-49 197.6 138 65.9
Cfa004645 Carpinus fangiana HOM05D005641 ORTHO05D007953 6.6e-49 197.6 111 79.3
Gohir.D02G205400 Gossypium hirsutum HOM05D005641 ORTHO05D007953 6.6e-49 197.6 134 70.9
Prupe.8G141700 Prunus persica HOM05D005641 ORTHO05D007953 6.6e-49 197.6 134 66.4
FvH4_2g04060 Fragaria vesca HOM05D005641 ORTHO05D007953 8.6e-49 197.2 136 67.6
FAN24G2036 Fragaria x ananassa HOM05D005641 ORTHO05D007953 8.6e-49 197.2 136 67.6
FAN15G3008 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.1e-48 196.8 136 67.6
Sabra09G0069700 Salix brachista HOM05D005641 ORTHO05D007953 1.1e-48 196.8 135 67.4
Cpa.g.sc106.73 Carica papaya HOM05D005641 ORTHO05D007953 1.9e-48 196.1 135 67.4
DCAR_029115 Daucus carota HOM05D005641 ORTHO05D007953 1.9e-48 196.1 127 70.1
FAN20G2714 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.9e-48 196.1 136 66.9
Sc14g0002550 Simmondsia chinensis HOM05D005641 ORTHO05D007953 1.9e-48 196.1 130 70.0
Gohir.A03G183900 Gossypium hirsutum HOM05D005641 ORTHO05D007953 2.5e-48 195.7 134 69.4
Rhsim05G0090100 Rhododendron simsii HOM05D005641 ORTHO05D007953 2.5e-48 195.7 134 68.7
Cc02_g19690 Coffea canephora HOM05D005641 ORTHO05D007953 3.3e-48 195.3 114 76.3
CANSAT25G1977 Cannabis sativa HOM05D005641 ORTHO05D007953 4.3e-48 194.9 134 70.1
MELO3C017992.2 Cucumis melo HOM05D005641 ORTHO05D007953 5.6e-48 194.5 140 65.7
TPR.G8292 Trifolium pratense HOM05D005641 ORTHO05D007953 5.6e-48 194.5 132 65.9
AUR62022504 Chenopodium quinoa HOM05D005641 ORTHO05D007953 7.3e-48 194.1 135 65.9
AUR62031337 Chenopodium quinoa HOM05D005641 ORTHO05D007953 7.3e-48 194.1 135 65.9
Medtr5g005150 Medicago truncatula HOM05D005641 ORTHO05D007953 7.3e-48 194.1 121 68.6
FAN27G3103 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.2e-47 193.4 117 71.8
Potri.009G090100 Populus trichocarpa HOM05D005641 ORTHO05D007953 1.2e-47 193.4 134 64.9
CsaV3_4G000430 Cucumis sativus L. HOM05D005641 ORTHO05D007953 1.6e-47 193.0 138 64.5
Eucgr.G01266 Eucalyptus grandis HOM05D005641 ORTHO05D007953 2.1e-47 192.6 136 64.0
Sed0000346 Sechium edule HOM05D005641 ORTHO05D007953 2.1e-47 192.6 136 69.1
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 2.1e-47 192.6 109 78.0
EL10Ac8g19366 Beta vulgaris HOM05D005641 ORTHO05D007953 2.8e-47 192.2 135 65.2
Nn1g04606 Nelumbo nucifera HOM05D005641 ORTHO05D007953 2.8e-47 192.2 114 71.9
PSO675G2895 Papaver somniferum HOM05D005641 ORTHO05D007953 4.7e-47 191.4 138 67.4
PGR042G3728 Punica granatum HOM05D005641 ORTHO05D007953 4.7e-47 191.4 132 65.2
PSO541G1794 Papaver somniferum HOM05D005641 ORTHO05D007953 6.2e-47 191.0 130 69.2
Lj1g0011960 Lotus japonicus HOM05D005641 ORTHO05D007953 8.0e-47 190.7 136 66.2
CSS0033790 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 1.8e-46 189.5 118 72.0
Phvul.002G052300 Phaseolus vulgaris HOM05D005641 ORTHO05D007953 4.0e-46 188.3 136 64.7
CSS0039741 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 8.9e-46 187.2 118 71.2
Aqoxy6G02714 Aquilegia oxysepala HOM05D005641 ORTHO05D007953 3.4e-45 185.3 113 71.7
Hund12610 Selenicereus undatus HOM05D005641 ORTHO05D007953 3.4e-45 185.3 119 70.6
Ciclev10028542m.g Citrus clementina HOM05D005641 ORTHO05D007953 7.5e-45 184.1 121 69.4
Carub.0003s2882 Capsella rubella HOM05D005641 ORTHO05D007953 9.8e-45 183.7 135 63.0
unitig_744.g24456 Utricularia gibba HOM05D005641 ORTHO05D007953 1.7e-44 183.0 132 65.9
Thhalv10022899m.g Eutrema salsugineum HOM05D005641 ORTHO05D007953 2.9e-44 182.2 134 61.9
TWI14G0306 Tripterygium wilfordii HOM05D005641 ORTHO05D007953 3.7e-44 181.8 137 62.8
CARHR284800 Cardamine hirsuta HOM05D005641 ORTHO05D007953 8.3e-44 180.6 133 62.4
AT2G14825 Arabidopsis thaliana HOM05D005641 ORTHO05D007953 1.4e-43 179.9 132 62.1
Aa31LG8G12890 Aethionema arabicum HOM05D005641 ORTHO05D007953 1.9e-43 179.5 136 61.8
Sp3g28020 Schrenkiella parvula HOM05D005641 ORTHO05D007953 1.9e-43 179.5 135 62.2
arahy.Tifrunner.gnm1.ann1.GRNJ5W Arachis hypogaea HOM05D005641 ORTHO05D007953 4.1e-43 178.3 115 71.3
AL3G46570 Arabidopsis lyrata HOM05D005641 ORTHO05D007953 5.4e-43 177.9 134 60.4
BraA09t36698Z Brassica rapa HOM05D005641 ORTHO05D007953 1.6e-42 176.4 131 61.1
BcaC04g23064 Brassica carinata HOM05D005641 ORTHO05D007953 3.5e-42 175.3 130 60.8
BolC9t54144H Brassica oleracea HOM05D005641 ORTHO05D007953 3.5e-42 175.3 130 60.8
VMungo1215G0158 Vigna mungo HOM05D005641 ORTHO05D007953 3.5e-42 175.3 159 56.0
THA.LOC104819534 Tarenaya hassleriana HOM05D005641 ORTHO05D007953 6.0e-42 174.5 147 54.4
Actinidia27984 Actinidia chinensis HOM05D005641 ORTHO05D007953 7.8e-42 174.1 137 65.7
HPP92_020459 Vanilla planifolia HOM05D005641 ORTHO05D007953 7.8e-42 174.1 132 61.4
C09p12490 Brassica napus HOM05D005641 ORTHO05D007953 1.0e-41 173.7 131 59.5
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 1.0e-41 173.7 108 70.4
SEGI_20221 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 1.3e-41 173.3 145 57.2
SEGI_25796 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 1.3e-41 173.3 145 57.2
A09p10560 Brassica napus HOM05D005641 ORTHO05D007953 2.3e-41 172.6 131 60.3
Glyma.01G243000 Glycine max HOM05D005641 ORTHO05D007953 8.6e-41 170.6 135 63.0
HPP92_026175 Vanilla planifolia HOM05D005641 ORTHO05D007953 2.5e-40 169.1 132 59.8
CDE06G0500 Ceratophyllum demersum HOM05D005641 ORTHO05D007953 5.6e-40 167.9 132 58.3
Zm00001eb137960 Zea mays HOM05D005641 ORTHO05D007953 6.4e-36 154.5 115 56.5
Os12g0508266 Oryza sativa ssp. japonica HOM05D005641 ORTHO05D007953 4.1e-35 151.8 115 55.7
Hma1.2p1_1023F.1_g248890 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 3.5e-34 148.7 130 58.5
Peaxi162Scf00003g02633 Petunia axillaris HOM05D005641 ORTHO05D007953 1.5e-32 143.3 140 57.1
SalBow3G4250 Salvia bowleyana HOM05D005641 ORTHO05D007953 2.1e-31 139.4 75 78.7
Ca_24352_v3 Cicer arietinum L. HOM05D005641 ORTHO05D007953 3.1e-30 135.6 78 74.4
Hma1.2p1_1023F.1_g248900 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 5.8e-29 131.3 81 72.8
Pp3c6_20250 Physcomitrium patens HOM05D005641 ORTHO05D007953 1.7e-28 129.8 133 47.4
RcHm_v2.0_Chr6g0253251 Rosa chinensis HOM05D005641 ORTHO05D007953 2.2e-28 129.4 90 56.7
arahy.Tifrunner.gnm1.ann1.C5GEYC Arachis hypogaea HOM05D005641 ORTHO05D007953 5.4e-27 124.8 115 56.5
RcHm_v2.0_Chr6g0253401 Rosa chinensis HOM05D005641 ORTHO05D035713 6.0e-26 121.3 94 56.4
FvH4_2g04050 Fragaria vesca HOM05D005641 ORTHO05D035713 1.3e-25 120.2 92 57.6
Lj9A326T79 Lonicera japonica HOM05D005641 ORTHO05D007953 1.3e-25 120.2 74 70.3
SMO119G0506 Selaginella moellendorffii HOM05D005641 ORTHO05D007953 1.1e-24 117.1 114 46.5
Nitab4.5_0007768g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 4.7e-23 111.7 62 85.5
CBR_g32245 Chara braunii HOM05D005641 ORTHO05D007953 3.1e-22 109.0 109 42.2
Prupe.8G141500 Prunus persica HOM05D005641 ORTHO05D007953 5.2e-22 108.2 89 51.7
RcHm_v2.0_Chr6g0253291 Rosa chinensis HOM05D005641 ORTHO05D007953 9.9e-21 104.0 84 47.6
Nitab4.5_0013410g0010 Nicotiana tabacum HOM05D005641 ORTHO05D007953 8.4e-20 100.9 62 79.0
Psat4g227920 Pisum sativum HOM05D005641 ORTHO05D007953 2.4e-19 99.4 132 43.9
ClCG10G010510 Citrullus lanatus HOM05D005641 ORTHO05D007953 7.1e-19 97.8 112 47.3
RcHm_v2.0_Chr6g0253371 Rosa chinensis HOM05D001615 ORTHO05D001493 9.3e-19 97.4 99 48.5
RcHm_v2.0_Chr6g0253261 Rosa chinensis HOM05D005641 ORTHO05D007953 2.3e-17 92.8 89 47.2
RcHm_v2.0_Chr6g0253341 Rosa chinensis HOM05D005641 ORTHO05D007953 4.3e-16 88.6 91 40.7
Lj9A326T80 Lonicera japonica HOM05D005641 ORTHO05D007953 4.8e-15 85.1 49 77.6
RcHm_v2.0_Chr6g0253281 Rosa chinensis HOM05D005641 ORTHO05D007953 1.5e-13 80.1 61 59.0
FAN24G2128 Fragaria x ananassa HOM05D005641 ORTHO05D208318 2.3e-09 66.2 70 45.7
ATR0019G033 Amborella trichopoda HOM05D005641 ORTHO05D007953 2.5e-08 62.8 58 53.4
Lalb_Chr16g0376281 Lupinus albus HOM05D005641 ORTHO05D007953 2.8e-07 59.3 50 54.0
FAN15G1393 Fragaria x ananassa HOM05D005641 ORTHO05D035713 3.7e-07 58.9 88 40.9
GSVIVG01029385001 Vitis vinifera HOM05D005641 ORTHO05D007953 1.8e-06 56.6 32 71.9
Zm00001eb264710 Zea mays HOM05D005641 ORTHO05D007953 5.3e-06 55.1 39 56.4


User provided reference genes

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