Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.8e-72 274.2 177 100.0
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.8e-48 194.5 183 73.8
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 2.6e-39 166.0 211 51.2
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.3e-38 163.7 134 67.9
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 4.9e-38 161.8 175 62.9
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.9e-37 159.8 135 63.7
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 3.2e-37 159.1 198 50.5
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.7e-36 156.0 207 51.2
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.3e-35 152.9 135 63.0
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 3.0e-35 152.5 135 63.0
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 3.0e-35 152.5 135 63.0
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 6.6e-35 151.4 194 49.5
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 7.3e-34 147.9 206 51.5
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 9.6e-34 147.5 135 61.5
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.3e-33 147.1 135 59.3
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.8e-33 146.0 134 60.4
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 4.8e-33 145.2 133 60.9
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 8.1e-33 144.4 207 55.1
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.4e-32 143.7 204 46.1
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.8e-32 143.3 135 59.3
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.0e-32 142.1 135 58.5
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 5.3e-32 141.7 135 60.0
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 9.0e-32 141.0 135 58.5
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.2e-31 140.6 131 61.8
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 1.5e-31 140.2 135 57.8
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 2.6e-31 139.4 135 57.8
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 5.8e-31 138.3 213 48.4
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 5.8e-31 138.3 135 58.5
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 9.9e-31 137.5 205 46.3
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.7e-30 136.7 170 48.2
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.8e-30 135.6 135 57.8
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 3.8e-30 135.6 135 57.8
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 6.4e-30 134.8 137 57.7
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 6.4e-30 134.8 135 57.0
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 8.4e-30 134.4 135 58.5
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.1e-29 134.0 133 54.9
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.4e-29 133.7 135 57.0
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.9e-29 133.3 195 48.2
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 2.4e-29 132.9 159 50.9
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 4.2e-29 132.1 204 47.1
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 4.2e-29 132.1 205 49.8
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 5.4e-29 131.7 135 54.8
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 9.3e-29 131.0 169 53.8
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.2e-28 130.6 135 54.1
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.2e-28 130.6 135 54.1
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.2e-28 130.6 135 57.0
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.6e-28 130.2 136 55.1
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 2.1e-28 129.8 135 56.3
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 2.1e-28 129.8 135 55.6
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 2.7e-28 129.4 168 48.2
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 4.6e-28 128.6 131 56.5
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 4.6e-28 128.6 168 47.0
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 6.0e-28 128.3 211 46.4
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.0e-27 127.5 134 56.0
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.0e-27 127.5 175 47.4
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.3e-27 127.1 133 55.6
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.3e-27 127.1 135 54.8
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.8e-27 126.7 131 55.7
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.8e-27 126.7 207 45.4
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.3e-27 126.3 136 55.9
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 2.3e-27 126.3 172 47.7
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 5.1e-27 125.2 168 46.4
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.1e-26 124.0 135 52.6
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.5e-26 123.6 204 49.5
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.9e-26 123.2 200 48.0
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.9e-26 123.2 131 55.0
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 2.5e-26 122.9 135 51.9
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.5e-26 122.9 135 51.9
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 3.3e-26 122.5 162 49.4
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.3e-26 122.5 135 51.1
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 4.3e-26 122.1 135 51.9
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 4.3e-26 122.1 168 45.8
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 5.6e-26 121.7 167 46.7
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 7.4e-26 121.3 164 45.1
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 9.6e-26 120.9 135 50.4
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.3e-25 120.6 137 52.6
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 1.6e-25 120.2 135 50.4
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.6e-25 120.2 135 50.4
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.6e-25 120.2 136 51.5
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.6e-25 120.2 136 51.5
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.6e-25 120.2 136 50.7
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.6e-25 120.2 136 51.5
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.1e-25 119.8 135 50.4
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.8e-25 119.4 131 54.2
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 2.8e-25 119.4 136 50.7
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 3.7e-25 119.0 135 49.6
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 3.7e-25 119.0 135 49.6
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.7e-25 119.0 133 51.9
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 4.8e-25 118.6 204 43.6
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 4.8e-25 118.6 204 43.6
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 4.8e-25 118.6 204 43.6
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 8.1e-25 117.9 136 50.7
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 8.1e-25 117.9 135 51.9
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.1e-24 117.5 134 55.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.4e-24 117.1 135 51.9
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 3.1e-24 115.9 164 43.3
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 4.0e-24 115.5 135 49.6
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 4.0e-24 115.5 131 50.4
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 9.0e-24 114.4 168 44.6
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.5e-23 113.6 98 64.3
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.5e-23 113.6 126 52.4
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.3e-22 110.5 82 72.0
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.5e-21 106.3 130 48.5
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 5.5e-21 105.1 160 43.1
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 5.5e-21 105.1 129 48.8
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 7.1e-21 104.8 129 48.8
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.2e-20 104.0 135 44.4
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.6e-20 102.1 135 44.4
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 6.0e-20 101.7 130 50.0
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 3.9e-19 99.0 131 45.8
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.5e-18 97.1 137 46.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 5.7e-18 95.1 67 77.6
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 7.4e-18 94.7 132 44.7
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 7.4e-18 94.7 132 44.7
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 2.1e-17 93.2 127 47.2
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 6.2e-17 91.7 132 43.2
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 6.2e-17 91.7 127 46.5
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 6.2e-17 91.7 132 43.2
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 6.2e-17 91.7 132 43.2
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.1e-16 90.9 127 46.5
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.4e-16 90.5 185 36.2
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.8e-16 90.1 165 39.4
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-16 90.1 165 39.4
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 9.0e-16 87.8 130 43.8
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 2.0e-15 86.7 199 36.7
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 2.0e-15 86.7 131 42.7
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 2.6e-15 86.3 132 41.7
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 3.8e-14 82.4 85 60.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.5e-13 79.7 130 41.5
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.2e-12 77.4 91 50.5
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.1e-12 75.1 132 40.9
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 7.9e-12 74.7 132 40.2
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.8e-11 73.6 98 45.9
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 1.1e-10 70.9 132 37.1
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.8e-08 63.5 133 38.3
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 2.6e-07 59.7 204 32.4


User provided reference genes

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