Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.3e-57 225.3 114 100.0
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.4e-38 162.9 114 77.2
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 3.1e-33 145.2 115 70.4
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 2.9e-31 138.7 120 66.7
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 2.4e-30 135.6 120 65.8
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.2e-29 133.3 109 68.8
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 3.3e-27 125.2 113 61.1
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 2.1e-26 122.5 115 58.3
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 3.6e-26 121.7 114 57.9
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.7e-26 121.3 115 56.5
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 4.7e-26 121.3 115 56.5
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 4.7e-26 121.3 115 56.5
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 4.7e-26 121.3 115 59.1
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 8.1e-26 120.6 115 58.3
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 1.1e-25 120.2 115 58.3
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 1.4e-25 119.8 115 57.4
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 1.4e-25 119.8 115 59.1
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 1.8e-25 119.4 115 58.3
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 1.8e-25 119.4 115 58.3
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 3.1e-25 118.6 125 53.6
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 5.2e-25 117.9 115 56.5
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 6.9e-25 117.5 115 57.4
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.2e-24 116.7 115 57.4
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.5e-24 116.3 115 57.4
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 1.5e-24 116.3 115 57.4
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 3.4e-24 115.2 112 58.9
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 3.4e-24 115.2 115 55.7
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.4e-24 114.8 114 55.3
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 7.6e-24 114.0 115 53.9
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 9.9e-24 113.6 113 55.8
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 9.9e-24 113.6 115 55.7
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.3e-23 113.2 114 55.3
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 1.3e-23 113.2 115 54.8
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.3e-23 113.2 115 54.8
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.3e-23 113.2 114 54.4
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 2.2e-23 112.5 115 53.9
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.2e-23 112.5 115 53.9
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 2.2e-23 112.5 114 54.4
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 3.8e-23 111.7 114 55.3
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 4.9e-23 111.3 110 56.4
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 4.9e-23 111.3 110 56.4
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 4.9e-23 111.3 113 56.6
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 4.9e-23 111.3 115 53.9
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 6.4e-23 110.9 113 56.6
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 6.4e-23 110.9 112 55.4
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 8.4e-23 110.5 113 54.0
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 8.4e-23 110.5 115 53.0
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.9e-22 109.4 113 54.0
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.9e-22 109.4 114 53.5
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 3.2e-22 108.6 107 57.9
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 5.4e-22 107.8 115 53.0
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 7.1e-22 107.5 115 55.7
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 9.3e-22 107.1 115 53.0
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 1.2e-21 106.7 115 52.2
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.2e-21 106.7 115 53.0
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.6e-21 106.3 114 54.4
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 1.6e-21 106.3 113 53.1
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 1.6e-21 106.3 115 53.9
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 1.6e-21 106.3 113 52.2
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.6e-21 106.3 115 54.8
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 3.5e-21 105.1 114 52.6
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 4.6e-21 104.8 113 52.2
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 4.6e-21 104.8 115 52.2
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 4.6e-21 104.8 114 53.5
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 4.6e-21 104.8 114 51.8
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 6.0e-21 104.4 113 50.4
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 7.8e-21 104.0 117 53.0
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 7.8e-21 104.0 115 51.3
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 7.8e-21 104.0 114 51.8
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.0e-20 103.6 113 51.3
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.0e-20 103.6 113 51.3
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.0e-20 103.6 113 51.3
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.7e-20 102.8 113 51.3
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.7e-20 102.8 113 51.3
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 1.7e-20 102.8 115 50.4
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 2.3e-20 102.4 115 53.0
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 3.0e-20 102.1 114 51.8
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 3.0e-20 102.1 115 52.2
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 3.0e-20 102.1 112 48.2
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.0e-20 102.1 113 50.4
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 3.9e-20 101.7 113 50.4
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 6.6e-20 100.9 107 53.3
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 8.7e-20 100.5 113 49.6
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 8.7e-20 100.5 113 49.6
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 8.7e-20 100.5 117 49.6
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.1e-19 100.1 113 49.6
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.1e-19 100.1 113 49.6
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.5e-19 99.8 109 55.0
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 7.3e-19 97.4 113 48.7
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.3e-18 96.7 113 47.8
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.8e-18 95.5 129 45.7
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 3.1e-17 92.0 181 39.2
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 3.1e-17 92.0 181 39.2
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 3.1e-17 92.0 97 53.6
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 4.0e-17 91.7 59 74.6
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 6.9e-17 90.9 108 47.2
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 1.2e-16 90.1 150 40.7
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.2e-13 80.1 110 45.5
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 1.8e-12 76.3 59 61.0
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 5.1e-12 74.7 80 51.2
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 1.1e-11 73.6 112 39.3
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 7.4e-11 70.9 42 78.6
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 9.6e-11 70.5 102 39.2
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 1.5e-08 63.2 197 30.5
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 1.3e-07 60.1 74 50.0
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 8.4e-07 57.4 74 47.3
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.1e-06 57.0 74 50.0
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.4e-06 56.6 75 48.0
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 4.2e-06 55.1 74 44.6
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 5.5e-06 54.7 74 44.6


User provided reference genes

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