Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.0e-100 370.2 199 100.0
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.2e-87 325.9 200 90.0
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.9e-71 272.3 203 79.8
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.9e-62 243.0 202 74.3
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 1.6e-61 240.0 203 73.4
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 5.7e-59 231.5 203 71.9
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.5e-56 221.9 209 69.4
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.2e-21 107.5 163 50.9
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 2.9e-18 96.3 168 42.3
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 4.9e-18 95.5 162 45.1
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 8.3e-18 94.7 173 43.4
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 1.2e-16 90.9 161 42.2
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 2.7e-16 89.7 199 40.7
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 3.5e-16 89.4 169 39.6
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 5.9e-16 88.6 171 46.8
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 1.0e-15 87.8 176 39.8
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 1.3e-15 87.4 161 40.4
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 3.0e-15 86.3 166 43.4
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 8.6e-15 84.7 167 39.5
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 1.9e-14 83.6 168 38.7
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.9e-14 83.6 182 40.1
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.6e-13 80.5 165 37.6
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 1.6e-13 80.5 168 38.7
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.6e-13 80.5 158 41.1
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 3.6e-13 79.3 178 39.9
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 4.7e-13 79.0 163 41.7
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 1.4e-12 77.4 165 40.6
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 1.4e-12 77.4 159 43.4
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 3.1e-12 76.3 172 37.8
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 4.0e-12 75.9 159 35.8
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.0e-12 75.9 175 36.6
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 6.8e-12 75.1 151 41.1
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.2e-11 74.3 159 35.8
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.2e-11 74.3 167 34.1
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.3e-10 70.9 160 35.6
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 1.9e-09 67.0 177 37.9
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.4e-09 66.6 165 35.8
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 2.4e-09 66.6 158 37.3
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 3.2e-09 66.2 161 37.3
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 5.4e-09 65.5 175 32.0
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 1.2e-08 64.3 164 36.0
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 1.2e-08 64.3 165 35.2
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.2e-08 64.3 165 35.2
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.2e-08 64.3 165 35.2
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 2.7e-08 63.2 171 33.3
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 2.7e-08 63.2 173 34.7
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 3.5e-08 62.8 166 34.9
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 4.6e-08 62.4 181 32.0
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 6.0e-08 62.0 166 34.9
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 6.0e-08 62.0 183 32.8
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 1.0e-07 61.2 191 31.4
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.0e-07 61.2 157 35.0
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 1.0e-07 61.2 163 33.7
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.0e-07 61.2 172 35.5
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 1.3e-07 60.8 185 35.7
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 1.3e-07 60.8 175 35.4
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 1.3e-07 60.8 185 33.0
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.7e-07 60.5 157 36.3
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 6.6e-07 58.5 177 35.0
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 6.6e-07 58.5 182 31.9
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 1.1e-06 57.8 192 31.8
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 2.5e-06 56.6 179 34.1
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 2.5e-06 56.6 174 36.8
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 2.5e-06 56.6 179 34.1
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 2.5e-06 56.6 179 34.1
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 3.3e-06 56.2 166 34.9
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 5.6e-06 55.5 170 33.5
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 5.6e-06 55.5 144 36.1


User provided reference genes

Program Settings