Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001234g0090 Nicotiana tabacum HOM05D002277 ORTHO05D001770 1.5e-89 332.8 170 100.0
Peaxi162Scf01078g00031 Petunia axillaris HOM05D002277 ORTHO05D001770 8.6e-40 167.5 195 59.0
Oeu011363.1 Olea europaea HOM05D002277 ORTHO05D001770 2.5e-23 112.8 196 44.4
Oeu027170.1 Olea europaea HOM05D002277 ORTHO05D001770 3.6e-22 109.0 184 47.8
Actinidia34486 Actinidia chinensis HOM05D002277 ORTHO05D001770 1.4e-21 107.1 185 47.6
Hma1.2p1_2270F.1_g318540 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 8.9e-21 104.4 195 45.6
Potri.013G156100 Populus trichocarpa HOM05D002277 ORTHO05D001770 2.1e-17 93.2 190 42.1
TAR636G1485 Trochodendron aralioides HOM05D002277 ORTHO05D001770 2.7e-17 92.8 178 42.1
RcHm_v2.0_Chr3g0460991 Rosa chinensis HOM05D002277 ORTHO05D001770 7.8e-17 91.3 183 46.4
TAR629G0672 Trochodendron aralioides HOM05D002277 ORTHO05D001770 7.8e-17 91.3 178 41.6
Potri.019G127400 Populus trichocarpa HOM05D002277 ORTHO05D001770 2.3e-16 89.7 192 40.6
Potri.016G133200 Populus trichocarpa HOM05D002277 ORTHO05D001770 3.0e-16 89.4 182 40.1
Nn2g13334 Nelumbo nucifera HOM05D002277 ORTHO05D001770 3.9e-16 89.0 183 39.9
Rhsim01G0241900 Rhododendron simsii HOM05D002277 ORTHO05D001770 6.6e-16 88.2 173 41.0
Sabra06G0083400 Salix brachista HOM05D002277 ORTHO05D001770 6.6e-16 88.2 178 44.4
TAR623G1362 Trochodendron aralioides HOM05D002277 ORTHO05D001770 8.7e-16 87.8 179 39.7
Duzib268G1048 Durio zibethinus HOM05D002277 ORTHO05D001770 1.5e-15 87.0 168 39.9
Prupe.6G289800 Prunus persica HOM05D002277 ORTHO05D001770 2.5e-15 86.3 173 39.9
VMungo1383G3736 Vigna mungo HOM05D002277 ORTHO05D001770 5.6e-15 85.1 165 44.2
Lj3g0001226 Lotus japonicus HOM05D002277 ORTHO05D001770 7.3e-15 84.7 171 42.7
Cpa.g.sc2.326 Carica papaya HOM05D002277 ORTHO05D001770 1.3e-14 84.0 190 38.4
TAR633G2754 Trochodendron aralioides HOM05D002277 ORTHO05D001770 1.6e-14 83.6 181 42.5
Hma1.2p1_1052F.1_g252370 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 2.1e-14 83.2 172 42.4
VMungo0331G0789 Vigna mungo HOM05D002277 ORTHO05D001770 4.8e-14 82.0 98 55.1
Glyma.09G277500 Glycine max HOM05D002277 ORTHO05D001770 6.2e-14 81.6 175 42.3
Lalb_Chr10g0103731 Lupinus albus HOM05D002277 ORTHO05D001770 6.2e-14 81.6 202 38.1
Medtr5g075040 Medicago truncatula HOM05D002277 ORTHO05D001770 6.2e-14 81.6 180 38.3
Sabra13G0126000 Salix brachista HOM05D002277 ORTHO05D001770 6.2e-14 81.6 196 38.8
Actinidia29050 Actinidia chinensis HOM05D002277 ORTHO05D001770 8.1e-14 81.3 160 42.5
Lalb_Chr19g0124091 Lupinus albus HOM05D002277 ORTHO05D001770 8.1e-14 81.3 158 40.5
Glyma.18G211300 Glycine max HOM05D002277 ORTHO05D001770 1.1e-13 80.9 172 42.4
Phvul.010G067300 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 1.1e-13 80.9 92 55.4
Psat7g229920 Pisum sativum HOM05D002277 ORTHO05D001770 2.4e-13 79.7 163 43.6
Potri.006G107200 Populus trichocarpa HOM05D002277 ORTHO05D001770 2.4e-13 79.7 176 40.3
TPR.G25757 Trifolium pratense HOM05D002277 ORTHO05D001770 2.4e-13 79.7 182 37.9
Glyma.01G131200 Glycine max HOM05D002277 ORTHO05D001770 4.0e-13 79.0 103 49.5
Sabra19G0125500 Salix brachista HOM05D002277 ORTHO05D001770 4.0e-13 79.0 183 38.8
Sabra19G0129800 Salix brachista HOM05D002277 ORTHO05D001770 4.0e-13 79.0 183 38.3
PSO384G4841 Papaver somniferum HOM05D002277 ORTHO05D001770 6.9e-13 78.2 195 37.4
PGSC0003DMG400029071 Solanum tuberosum HOM05D002277 ORTHO05D001770 9.0e-13 77.8 142 38.0
Thecc.04G155300 Theobroma cacao HOM05D002277 ORTHO05D001770 9.0e-13 77.8 170 38.2
Thecc.09G361400 Theobroma cacao HOM05D002277 ORTHO05D001770 9.0e-13 77.8 192 36.5
Lj1g0022794 Lotus japonicus HOM05D002277 ORTHO05D001770 1.2e-12 77.4 94 51.1
CiPaw.14G052400 Carya illinoinensis HOM05D002277 ORTHO05D001770 1.5e-12 77.0 169 43.8
CiPaw.01G304400 Carya illinoinensis HOM05D002277 ORTHO05D001770 2.0e-12 76.6 167 40.1
CiPaw.13G065900 Carya illinoinensis HOM05D002277 ORTHO05D001770 2.0e-12 76.6 201 37.8
MBI15_g33145_MAGBIO Magnolia biondii HOM05D002277 ORTHO05D001770 2.0e-12 76.6 174 39.1
MSTRG.18959 Avicennia marina HOM05D002277 ORTHO05D001770 3.4e-12 75.9 176 36.4
Phvul.008G086700 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 3.4e-12 75.9 165 41.8
Duzib212G0079 Durio zibethinus HOM05D002277 ORTHO05D001770 4.5e-12 75.5 173 38.7
Ca_24067_v3 Cicer arietinum L. HOM05D002277 ORTHO05D001770 5.8e-12 75.1 164 40.9
Glyma.02G234700 Glycine max HOM05D002277 ORTHO05D001770 5.8e-12 75.1 189 40.2
CiPaw.09G218200 Carya illinoinensis HOM05D002277 ORTHO05D001770 7.6e-12 74.7 150 40.0
Lalb_Chr07g0190701 Lupinus albus HOM05D002277 ORTHO05D001770 7.6e-12 74.7 94 51.1
Manes.09G115500 Manihot esculenta HOM05D002277 ORTHO05D001770 7.6e-12 74.7 179 38.0
Lj2P1099T14 Lonicera japonica HOM05D002277 ORTHO05D001770 9.9e-12 74.3 173 38.2
Medtr7g072540 Medicago truncatula HOM05D002277 ORTHO05D001770 1.3e-11 73.9 88 50.0
TPR.G4419 Trifolium pratense HOM05D002277 ORTHO05D001770 1.3e-11 73.9 88 51.1
VMungo0647G0196 Vigna mungo HOM05D002277 ORTHO05D001770 1.3e-11 73.9 180 37.2
Psat2g051880 Pisum sativum HOM05D002277 ORTHO05D001770 2.2e-11 73.2 175 36.6
QL07p032796 Quercus lobata HOM05D002277 ORTHO05D001770 2.2e-11 73.2 159 38.4
CSS0032322 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 2.9e-11 72.8 145 38.6
Gohir.A03G023900 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.9e-11 72.8 184 39.7
Lsat_1_v5_gn_5_175260 Lactuca sativa HOM05D002277 ORTHO05D001770 3.8e-11 72.4 154 42.2
Nitab4.5_0004650g0010 Nicotiana tabacum HOM05D002277 ORTHO05D001770 3.8e-11 72.4 175 36.0
Manes.18G140500 Manihot esculenta HOM05D002277 ORTHO05D001770 4.9e-11 72.0 168 40.5
Gohir.D03G144700 Gossypium hirsutum HOM05D002277 ORTHO05D001770 6.4e-11 71.6 184 38.6
PSO339G6062 Papaver somniferum HOM05D002277 ORTHO05D001770 6.4e-11 71.6 136 41.2
Phvul.008G249000 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 6.4e-11 71.6 174 38.5
Manes.07G138400 Manihot esculenta HOM05D002277 ORTHO05D001770 1.1e-10 70.9 147 39.5
Manes.08G172400 Manihot esculenta HOM05D002277 ORTHO05D001770 1.4e-10 70.5 153 41.2
Thecc.10G174900 Theobroma cacao HOM05D002277 ORTHO05D001770 1.4e-10 70.5 185 35.1
Atru.chr1.2541 Acer truncatum HOM05D002277 ORTHO05D001770 1.9e-10 70.1 199 38.7
Gohir.A02G005000 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.9e-10 70.1 143 38.5
Gorai.003G151900 Gossypium raimondii HOM05D002277 ORTHO05D001770 1.9e-10 70.1 183 38.8
Nitab4.5_0000263g0230 Nicotiana tabacum HOM05D002277 ORTHO05D001770 2.4e-10 69.7 175 35.4
LjContig00141g0024890 Lotus japonicus HOM05D002277 ORTHO05D001770 3.2e-10 69.3 189 34.4
Solyc06g007420.1 Solanum lycopersicum HOM05D002277 ORTHO05D001770 3.2e-10 69.3 99 49.5
Sopen06g002340 Solanum pennellii HOM05D002277 ORTHO05D001770 3.2e-10 69.3 99 49.5
Actinidia33883 Actinidia chinensis HOM05D002277 ORTHO05D001770 5.4e-10 68.6 168 38.1
Cfa017063 Carpinus fangiana HOM05D002277 ORTHO05D001770 5.4e-10 68.6 169 40.2
Ciclev10002474m.g Citrus clementina HOM05D002277 ORTHO05D001770 5.4e-10 68.6 185 34.6
FAN02G0282 Fragaria x ananassa HOM05D002277 ORTHO05D001770 5.4e-10 68.6 129 43.4
FvH4_6g10240 Fragaria vesca HOM05D002277 ORTHO05D001770 7.1e-10 68.2 174 39.7
Sabra04G0150900 Salix brachista HOM05D002277 ORTHO05D001770 7.1e-10 68.2 180 38.3
ECA248G3276 Erigeron canadensis HOM05D002277 ORTHO05D001770 9.3e-10 67.8 132 40.9
Psat3g121440 Pisum sativum HOM05D002277 ORTHO05D001770 9.3e-10 67.8 95 47.4
Aqoxy85s002 Aquilegia oxysepala HOM05D002277 ORTHO05D001770 1.6e-09 67.0 106 42.5
Ca_19777_v3 Cicer arietinum L. HOM05D002277 ORTHO05D001770 1.6e-09 67.0 169 39.1
Lalb_Chr17g0345561 Lupinus albus HOM05D002277 ORTHO05D001770 1.6e-09 67.0 190 36.3
Glyma.03G037600 Glycine max HOM05D002277 ORTHO05D001770 2.1e-09 66.6 60 60.0
Cc02_g05610 Coffea canephora HOM05D002277 ORTHO05D001770 2.7e-09 66.2 180 37.2
FAN10G1465 Fragaria x ananassa HOM05D002277 ORTHO05D001770 3.5e-09 65.9 159 37.1
Atru.chr12.148 Acer truncatum HOM05D002277 ORTHO05D001770 4.6e-09 65.5 93 44.1
Sed0026001 Sechium edule HOM05D002277 ORTHO05D001770 4.6e-09 65.5 174 35.1
Gohir.A10G181050 Gossypium hirsutum HOM05D002277 ORTHO05D001770 6.0e-09 65.1 114 38.6
Gorai.011G210700 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.0e-09 65.1 188 33.5
PGSC0003DMG400020563 Solanum tuberosum HOM05D002277 ORTHO05D001770 6.0e-09 65.1 105 46.7
FAN14G3640 Fragaria x ananassa HOM05D002277 ORTHO05D001770 7.9e-09 64.7 176 38.1
Potri.013G083101 Populus trichocarpa HOM05D002277 ORTHO05D001770 7.9e-09 64.7 111 39.6
QL01p025249 Quercus lobata HOM05D002277 ORTHO05D001770 7.9e-09 64.7 161 36.0
RcHm_v2.0_Chr1g0371651 Rosa chinensis HOM05D002277 ORTHO05D001770 7.9e-09 64.7 154 33.8
Ciclev10012858m.g Citrus clementina HOM05D002277 ORTHO05D001770 1.0e-08 64.3 164 37.8
Cfa011806 Carpinus fangiana HOM05D002277 ORTHO05D001770 1.3e-08 63.9 140 39.3
Duzib128G0618 Durio zibethinus HOM05D002277 ORTHO05D001770 1.3e-08 63.9 112 43.8
Gohir.A10G149200 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.3e-08 63.9 166 37.3
Lsat_1_v5_gn_5_148320 Lactuca sativa HOM05D002277 ORTHO05D001770 1.3e-08 63.9 185 33.0
Peaxi162Scf00464g00005 Petunia axillaris HOM05D002277 ORTHO05D001770 1.3e-08 63.9 171 31.6
TWI31G1041 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 1.3e-08 63.9 152 36.8
COL.COLO4_03891 Corchorus olitorius HOM05D002277 ORTHO05D001770 1.8e-08 63.5 82 46.3
Prupe.6G043800 Prunus persica HOM05D002277 ORTHO05D001770 1.8e-08 63.5 145 35.9
Gohir.D13G005350 Gossypium hirsutum HOM05D002277 ORTHO05D001770 3.0e-08 62.8 83 44.6
Medtr4g029130 Medicago truncatula HOM05D002277 ORTHO05D001770 3.0e-08 62.8 172 36.6
TWI77G0059 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 3.0e-08 62.8 173 34.1
CDE04G2385 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 3.9e-08 62.4 172 33.1
FvH4_7g25590 Fragaria vesca HOM05D002277 ORTHO05D001770 3.9e-08 62.4 183 35.0
FAN06G1120 Fragaria x ananassa HOM05D002277 ORTHO05D001770 3.9e-08 62.4 164 36.6
FAN21G1843 Fragaria x ananassa HOM05D002277 ORTHO05D001770 3.9e-08 62.4 105 43.8
FAN25G3585 Fragaria x ananassa HOM05D002277 ORTHO05D001770 3.9e-08 62.4 105 43.8
Phvul.008G218400 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 5.1e-08 62.0 166 35.5
Gohir.D10G117600 Gossypium hirsutum HOM05D002277 ORTHO05D001770 6.7e-08 61.6 160 34.4
Gorai.013G006000 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.7e-08 61.6 83 43.4
Lalb_Chr08g0231311 Lupinus albus HOM05D002277 ORTHO05D001770 8.7e-08 61.2 154 35.7
CARHR166420 Cardamine hirsuta HOM05D010959 ORTHO05D001770 1.5e-07 60.5 156 34.6
Haze_21138 Corylus avellana HOM05D002277 ORTHO05D001770 1.5e-07 60.5 110 41.8
Haze_21144 Corylus avellana HOM05D002277 ORTHO05D001770 1.5e-07 60.5 110 41.8
Haze_21148 Corylus avellana HOM05D002277 ORTHO05D001770 1.5e-07 60.5 110 41.8
Sabra13G0071200 Salix brachista HOM05D002277 ORTHO05D001770 1.5e-07 60.5 138 34.8
QL08p064469 Quercus lobata HOM05D002277 ORTHO05D001770 1.9e-07 60.1 104 42.3
Cfa001229 Carpinus fangiana HOM05D002277 ORTHO05D001770 2.5e-07 59.7 159 34.6
MELO3C026052.2 Cucumis melo HOM05D002277 ORTHO05D001770 2.5e-07 59.7 155 34.8
Glyma.02G259200 Glycine max HOM05D002277 ORTHO05D001770 2.5e-07 59.7 108 41.7
Oeu024724.1 Olea europaea HOM05D002277 ORTHO05D001770 2.5e-07 59.7 132 37.1
Peaxi162Scf00167g00134 Petunia axillaris HOM05D002277 ORTHO05D001770 2.5e-07 59.7 173 33.5
MSTRG.5517 Avicennia marina HOM05D002277 ORTHO05D001770 3.3e-07 59.3 180 35.6
Ciclev10033390m.g Citrus clementina HOM05D002277 ORTHO05D001770 3.3e-07 59.3 112 40.2
Glyma.18G021200 Glycine max HOM05D002277 ORTHO05D001770 3.3e-07 59.3 132 37.9
Gohir.D10G187900 Gossypium hirsutum HOM05D002277 ORTHO05D001770 3.3e-07 59.3 186 31.2
Oeu033238.1 Olea europaea HOM05D002277 ORTHO05D001770 3.3e-07 59.3 127 37.8
Sabra13G0072000 Salix brachista HOM05D002277 ORTHO05D001770 3.3e-07 59.3 138 34.1
Solyc06g050370.1 Solanum lycopersicum HOM05D002277 ORTHO05D001770 4.3e-07 58.9 98 38.8
BcaB02g07660 Brassica carinata HOM05D010959 ORTHO05D001770 5.6e-07 58.5 108 40.7
COL.COLO4_11188 Corchorus olitorius HOM05D002277 ORTHO05D001770 5.6e-07 58.5 176 36.4
Oeu058656.1 Olea europaea HOM05D002277 ORTHO05D001770 5.6e-07 58.5 140 32.9
Sopen06g015870 Solanum pennellii HOM05D002277 ORTHO05D001770 5.6e-07 58.5 98 38.8
BcaC08g44774 Brassica carinata HOM05D010959 ORTHO05D001770 7.4e-07 58.2 102 41.2
C06p23450 Brassica napus HOM05D010959 ORTHO05D001770 7.4e-07 58.2 102 41.2
ClCG11G005770 Citrullus lanatus HOM05D002277 ORTHO05D001770 7.4e-07 58.2 104 39.4
Cc06_g00560 Coffea canephora HOM05D002277 ORTHO05D001770 7.4e-07 58.2 145 36.6
COL.COLO4_30002 Corchorus olitorius HOM05D002277 ORTHO05D001770 7.4e-07 58.2 99 43.4
Sc12g0000180 Simmondsia chinensis HOM05D002277 ORTHO05D001770 7.4e-07 58.2 196 34.7
Sopen09g015550 Solanum pennellii HOM05D002277 ORTHO05D001770 7.4e-07 58.2 175 35.4
Glyma.14G053500 Glycine max HOM05D002277 ORTHO05D001770 9.6e-07 57.8 126 37.3
Gohir.A13G005650 Gossypium hirsutum HOM05D002277 ORTHO05D001770 9.6e-07 57.8 83 42.2
Medtr3g072360 Medicago truncatula HOM05D002277 ORTHO05D001770 9.6e-07 57.8 102 43.1
Prupe.2G261100 Prunus persica HOM05D002277 ORTHO05D001770 9.6e-07 57.8 84 47.6
Sp5g06240 Schrenkiella parvula HOM05D010959 ORTHO05D001770 9.6e-07 57.8 153 39.9
PGR031G1525 Punica granatum HOM05D002277 ORTHO05D001770 1.3e-06 57.4 105 39.0
Carub.0005s2304 Capsella rubella HOM05D010959 ORTHO05D001770 1.6e-06 57.0 71 43.7
VMungo0647G0912 Vigna mungo HOM05D002277 ORTHO05D001770 1.6e-06 57.0 86 41.9
A07p22870 Brassica napus HOM05D010959 ORTHO05D001770 2.1e-06 56.6 96 42.7
BolC6t37519H Brassica oleracea HOM05D010959 ORTHO05D001770 2.1e-06 56.6 102 41.2
BraA07t29953Z Brassica rapa HOM05D010959 ORTHO05D001770 2.1e-06 56.6 96 42.7
MELO3C019998.2 Cucumis melo HOM05D002277 ORTHO05D001770 2.1e-06 56.6 100 40.0
HanXRQChr11g0337191 Helianthus annuus HOM05D002277 ORTHO05D001770 2.1e-06 56.6 112 37.5
VMungo1383G0121 Vigna mungo HOM05D002277 ORTHO05D001770 2.1e-06 56.6 101 41.6
CSS0043215 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 2.8e-06 56.2 112 37.5
Cpa.g.sc19.91 Carica papaya HOM05D002277 ORTHO05D001770 2.8e-06 56.2 106 40.6
ECA248G3625 Erigeron canadensis HOM05D002277 ORTHO05D001770 3.7e-06 55.8 109 36.7
MSTRG.8902 Avicennia marina HOM05D002277 ORTHO05D001770 4.8e-06 55.5 93 46.2
Gohir.D02G005400 Gossypium hirsutum HOM05D002277 ORTHO05D001770 4.8e-06 55.5 158 30.4
ATR0681G220 Amborella trichopoda HOM05D002277 ORTHO05D001770 6.2e-06 55.1 105 36.2
FAN11G2787 Fragaria x ananassa HOM05D002277 ORTHO05D001770 6.2e-06 55.1 173 35.3
FAN16G0709 Fragaria x ananassa HOM05D002277 ORTHO05D001770 6.2e-06 55.1 173 35.3
Gorai.011G129500 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.2e-06 55.1 169 32.0
Manes.10G005600 Manihot esculenta HOM05D002277 ORTHO05D001770 6.2e-06 55.1 111 37.8
TPR.G649 Trifolium pratense HOM05D002277 ORTHO05D001770 6.2e-06 55.1 86 44.2
FAN03G3432 Fragaria x ananassa HOM05D002277 ORTHO05D001770 8.1e-06 54.7 147 34.0
Phvul.005G105700 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 8.1e-06 54.7 67 47.8
Psat5g132120 Pisum sativum HOM05D002277 ORTHO05D001770 8.1e-06 54.7 110 40.9
Rhsim09G0183700 Rhododendron simsii HOM05D002277 ORTHO05D001770 8.1e-06 54.7 157 39.5
TWI31G0347 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 8.1e-06 54.7 140 35.7


User provided reference genes

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