Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 1.5e-63 246.1 130 100.0
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 2.0e-44 182.6 98 93.9
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.4e-26 123.2 96 68.8
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 7.1e-26 120.9 78 83.3
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 2.3e-24 115.9 96 66.7
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 5.1e-24 114.8 96 65.6
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 4.9e-19 98.2 98 59.2
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 1.4e-18 96.7 101 56.4
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 2.4e-18 95.9 99 54.5
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 1.2e-17 93.6 96 55.2
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 6.6e-16 87.8 98 53.1
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 3.3e-15 85.5 97 55.7
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 4.3e-15 85.1 98 53.1
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 7.3e-15 84.3 105 50.5
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 9.6e-15 84.0 100 54.0
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 9.6e-15 84.0 98 50.0
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 1.3e-14 83.6 103 48.5
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 3.6e-14 82.0 98 54.1
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 4.8e-14 81.6 96 49.0
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 6.2e-14 81.3 96 49.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 3.1e-13 79.0 101 47.5
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.0e-13 78.6 96 50.0
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.0e-13 78.6 97 51.5
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 5.3e-13 78.2 96 50.0
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 1.2e-12 77.0 97 50.5
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 1.5e-12 76.6 96 53.1
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.0e-12 76.3 96 51.0
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.6e-12 75.9 96 47.9
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 2.6e-12 75.9 103 49.5
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 2.6e-12 75.9 96 46.9
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 3.4e-12 75.5 101 48.5
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.4e-12 75.1 96 50.0
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 5.8e-12 74.7 102 49.0
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 5.8e-12 74.7 96 45.8
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 7.6e-12 74.3 96 46.9
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 9.9e-12 73.9 110 43.6
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 9.9e-12 73.9 95 44.2
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 1.7e-11 73.2 96 47.9
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 1.7e-11 73.2 98 43.9
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 6.4e-11 71.2 96 43.8
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 6.4e-11 71.2 102 48.0
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.4e-11 70.9 96 49.0
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.1e-10 70.5 100 50.0
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.1e-10 70.5 102 49.0
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 1.4e-10 70.1 97 44.3
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.4e-10 70.1 104 45.2
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 1.9e-10 69.7 96 45.8
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 2.4e-10 69.3 99 46.5
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 3.2e-10 68.9 96 43.8
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 3.2e-10 68.9 96 43.8
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 1.2e-09 67.0 99 43.4
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 1.2e-09 67.0 97 44.3
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 1.2e-09 67.0 100 45.0
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 1.6e-09 66.6 96 43.8
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.1e-09 66.2 96 44.8
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 3.5e-09 65.5 101 41.6
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 4.6e-09 65.1 99 46.5
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 4.6e-09 65.1 96 41.7
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 6.0e-09 64.7 101 41.6
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 6.0e-09 64.7 101 45.5
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.0e-08 63.9 96 43.8
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.0e-08 63.9 96 43.8
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 1.0e-08 63.9 100 43.0
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.3e-08 63.5 100 46.0
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.3e-08 62.8 100 45.0
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 3.0e-08 62.4 108 38.0
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 3.9e-08 62.0 99 42.4
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 5.1e-08 61.6 73 47.9
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 5.1e-08 61.6 100 45.0
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 5.1e-08 61.6 100 45.0
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 5.1e-08 61.6 100 45.0
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 7.3e-07 57.8 102 41.2
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 7.3e-07 57.8 98 40.8
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 9.6e-07 57.4 101 41.6
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 1.6e-06 56.6 58 48.3
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 2.8e-06 55.8 105 38.1
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 2.8e-06 55.8 111 35.1
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 3.6e-06 55.5 99 38.4
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 8.1e-06 54.3 109 39.4


User provided reference genes

Program Settings