Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 6.2e-293 1010.4 629 100.0
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.9e-250 867.8 642 84.4
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 5.3e-212 741.5 624 80.0
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 2.5e-193 679.5 630 76.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 5.0e-186 655.2 630 75.1
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 5.0e-186 655.2 630 74.4
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 9.2e-180 634.4 519 82.3
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.3e-128 464.5 611 55.6
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.6e-128 464.2 615 58.2
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 2.0e-126 457.2 608 54.4
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.3e-125 454.5 626 56.5
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 8.5e-125 451.8 589 59.6
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.1e-123 447.2 630 57.5
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.7e-123 446.8 633 47.6
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 2.8e-120 436.8 627 54.2
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.8e-120 436.8 608 55.1
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 4.8e-120 436.0 620 55.3
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.3e-117 427.9 656 53.4
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.9e-117 426.8 638 44.2
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.8e-117 426.4 653 46.4
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.5e-117 425.6 640 40.6
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 8.5e-117 425.2 618 54.9
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.7e-115 420.2 649 49.6
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.0e-114 418.3 609 51.6
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 8.8e-114 415.2 620 49.7
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 1.1e-113 414.8 643 46.0
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.4e-111 407.9 628 55.9
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 2.6e-110 403.7 610 54.8
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 5.0e-109 399.4 606 50.5
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 6.5e-109 399.1 610 52.1
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.9e-108 397.5 607 54.0
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.2e-108 396.7 620 52.4
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 2.1e-107 394.0 636 49.2
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 2.7e-107 393.7 619 48.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 6.1e-107 392.5 616 51.1
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 6.7e-106 389.0 611 52.0
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 2.0e-105 387.5 615 44.1
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 5.7e-105 386.0 610 52.0
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 7.4e-105 385.6 610 51.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 9.7e-105 385.2 618 49.4
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.7e-104 384.4 646 44.0
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 8.2e-104 382.1 609 51.6
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 9.1e-103 378.6 520 58.1
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 4.2e-100 369.8 610 47.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 4.2e-100 369.8 616 51.5
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 1.2e-99 368.2 608 45.1
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 1.2e-99 368.2 611 49.6
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.8e-98 364.4 588 54.3
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 3.0e-98 363.6 521 52.8
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.5e-97 361.3 630 50.2
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 6.3e-96 355.9 592 50.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 8.2e-96 355.5 606 43.2
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.4e-95 354.0 391 59.8
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 9.1e-95 352.1 572 50.3
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.2e-94 351.7 606 48.2
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.6e-94 351.3 606 48.3
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 5.9e-94 349.4 629 49.4
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 5.0e-93 346.3 499 58.5
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 6.5e-93 345.9 614 48.2
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 5.5e-92 342.8 610 47.7
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.7e-91 340.5 626 47.3
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 8.8e-90 335.5 453 59.6
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.3e-88 331.6 622 46.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 1.6e-86 324.7 622 42.1
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 2.7e-86 323.9 613 45.0
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 4.5e-86 323.2 620 46.6
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.7e-85 321.2 614 50.2
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 5.5e-84 316.2 636 45.0
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 5.5e-84 316.2 636 45.0
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.3e-82 310.8 419 53.5
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 3.0e-82 310.5 571 45.2
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.0e-81 307.8 612 47.9
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 3.4e-81 307.0 612 47.1
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.7e-81 306.2 549 49.5
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.1e-79 302.0 639 42.6
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.4e-79 301.6 625 47.2
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 2.4e-79 300.8 635 43.8
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 2.4e-79 300.8 635 43.8
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 7.0e-79 299.3 612 47.5
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.2e-78 298.5 612 47.1
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 2.9e-77 293.9 635 43.5
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 4.3e-76 290.0 614 46.9
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 2.9e-72 277.3 627 45.1
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 3.3e-68 263.8 613 44.5
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 3.1e-66 257.3 579 49.6
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.2e-65 255.4 364 50.5
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 2.9e-64 250.8 617 39.7
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 8.3e-64 249.2 645 28.7
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 5.0e-61 240.0 629 39.7
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 3.3e-60 237.3 402 52.2
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 9.5e-60 235.7 628 44.6
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.2e-59 235.3 504 42.7
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 3.1e-58 230.7 617 42.6
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 5.2e-58 229.9 555 40.7
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 5.2e-58 229.9 614 36.8
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 2.0e-57 228.0 632 43.0
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.4e-57 226.9 622 33.0
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.4e-57 226.9 622 33.0
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 1.7e-56 224.9 635 41.9
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 1.1e-55 222.2 624 41.0
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 9.2e-55 219.2 624 42.3
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.9e-52 211.5 544 43.0
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.9e-48 197.6 626 42.2
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.4e-34 151.4 320 31.9
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 4.5e-33 147.1 157 56.1
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 2.4e-31 141.4 228 40.4
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.3e-29 134.8 230 47.0
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.6e-27 128.6 153 52.9
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.6e-14 85.5 194 48.5
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 3.7e-11 74.3 152 36.2
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 2.2e-08 65.1 50 62.0
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 2.9e-08 64.7 172 31.4
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 6.5e-08 63.5 50 60.0
Zm00001eb177640 Zea mays HOM05D000094 ORTHO05D004969 1.4e-07 62.4 169 33.7
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 4.2e-07 60.8 51 62.7
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 2.1e-06 58.5 40 70.0
Eucgr.E04289 Eucalyptus grandis HOM05D000311 ORTHO05D000183 6.1e-06 57.0 233 27.0


User provided reference genes

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