Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 4.0e-189 664.8 396 100.0
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 4.8e-158 561.6 394 83.2
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.1e-127 460.7 396 75.8
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 4.4e-127 458.8 396 73.7
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 5.3e-125 451.8 396 74.5
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 2.4e-56 223.8 236 50.8
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 4.4e-55 219.5 224 53.1
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.2e-52 211.5 232 50.0
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 1.7e-51 207.6 226 51.3
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 3.9e-51 206.5 225 52.4
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 5.1e-51 206.1 232 51.7
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 5.1e-51 206.1 420 38.6
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 1.1e-50 204.9 233 51.1
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.5e-50 204.5 228 51.3
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.3e-50 203.4 228 51.3
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 9.6e-50 201.8 253 49.0
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 1.3e-49 201.4 234 50.9
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 1.8e-48 197.6 410 42.4
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 2.4e-48 197.2 386 37.8
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 3.1e-48 196.8 223 51.1
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 5.3e-48 196.1 227 50.2
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 6.9e-48 195.7 227 52.0
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 9.0e-48 195.3 232 49.6
Solyc08g082230.3 Solanum lycopersicum HOM05D007666 ORTHO05D009567 9.0e-48 195.3 221 64.3
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 7.6e-47 192.2 236 47.5
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 9.9e-47 191.8 426 42.3
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 2.9e-46 190.3 231 46.8
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 4.9e-46 189.5 233 50.2
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.4e-45 188.0 248 46.8
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 1.4e-45 188.0 241 49.0
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 1.9e-45 187.6 238 46.2
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 3.2e-45 186.8 238 47.9
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 3.2e-45 186.8 251 46.2
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.1e-44 184.1 228 49.1
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 2.1e-44 184.1 252 45.6
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 6.0e-44 182.6 420 36.2
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 6.0e-44 182.6 251 45.0
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.0e-44 182.6 251 45.0
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 7.9e-44 182.2 206 51.0
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 7.9e-44 182.2 238 45.0
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.8e-43 181.0 251 44.6
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.3e-43 180.6 251 44.6
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 8.7e-43 178.7 244 41.8
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 8.7e-43 178.7 207 52.2
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.9e-42 177.6 229 50.7
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 4.3e-42 176.4 222 45.9
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 1.6e-41 174.5 421 35.6
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 1.6e-41 174.5 229 46.3
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 5.3e-40 169.5 237 43.9
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 5.3e-40 169.5 241 42.7
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.5e-39 167.9 227 46.3
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 5.8e-39 166.0 217 42.9
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 7.6e-39 165.6 240 41.2
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.0e-38 165.2 217 42.9
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 3.8e-38 163.3 233 41.6
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 4.9e-38 162.9 246 41.9
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 4.9e-38 162.9 227 46.7
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 4.2e-37 159.8 243 45.3
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 4.2e-37 159.8 217 41.9
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 5.5e-37 159.5 244 41.0
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.7e-36 157.1 232 41.4
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 7.9e-36 155.6 242 38.4
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 1.3e-35 154.8 246 40.2
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 1.1e-34 151.8 202 48.5
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 2.5e-34 150.6 243 38.7
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 3.3e-34 150.2 242 38.0
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 9.6e-34 148.7 250 42.0
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 1.3e-33 148.3 233 44.2
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 2.8e-33 147.1 251 39.4
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 1.8e-32 144.4 241 39.8
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 1.2e-31 141.7 302 37.7
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 1.2e-31 141.7 365 32.6
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 5.8e-31 139.4 230 40.4
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 7.6e-31 139.0 236 39.0
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 3.2e-29 133.7 235 37.9
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 3.2e-29 133.7 235 37.9
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 7.1e-29 132.5 235 37.9
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 7.1e-29 132.5 262 36.6
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 9.3e-29 132.1 217 36.4
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 1.2e-28 131.7 233 39.9
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.2e-28 131.7 94 80.9
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 1.6e-28 131.3 257 38.1
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 1.8e-27 127.9 233 39.1
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.1e-26 125.2 195 41.5
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 7.4e-26 122.5 210 38.1
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 9.7e-26 122.1 210 39.5
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 6.9e-24 115.9 159 47.2
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 3.4e-23 113.6 218 38.5
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 4.5e-23 113.2 184 42.4
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 5.9e-23 112.8 155 47.7
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.2e-13 80.1 96 40.6
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.4e-13 79.0 227 29.5
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.4e-13 79.0 227 29.5
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.4e-13 79.0 227 29.5
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 1.2e-12 78.6 220 29.1
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.7e-12 76.6 227 29.5
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 4.7e-12 76.6 199 34.2
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.9e-11 73.6 217 29.0
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 5.1e-11 73.2 217 30.9
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 6.7e-11 72.8 216 30.1
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 2.0e-10 71.2 246 30.9
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.4e-10 70.1 210 31.4
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 4.4e-10 70.1 220 30.0
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.7e-10 68.9 219 27.9
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 1.3e-09 68.6 219 27.9
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 1.3e-09 68.6 225 28.9
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.8e-09 67.4 194 29.4
Mapoly0014s0172 Marchantia polymorpha HOM05D029953 ORTHO05D009567 2.8e-09 67.4 246 25.2
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.4e-08 65.1 206 29.1
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 2.4e-08 64.3 213 30.0
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 5.3e-08 63.2 238 23.5
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 7.0e-08 62.8 217 31.3
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 7.0e-08 62.8 217 29.5
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 1.5e-07 61.6 221 29.0
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 2.0e-07 61.2 103 35.9
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 2.0e-07 61.2 213 30.5
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 3.5e-07 60.5 213 30.5
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 4.5e-07 60.1 216 28.7
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 5.9e-07 59.7 205 32.2
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 7.7e-07 59.3 212 27.8
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.0e-06 58.9 215 27.0
Zm00001eb290650 Zea mays HOM05D003589 ORTHO05D005170 2.9e-06 57.4 238 29.0
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 5.0e-06 56.6 185 25.4


User provided reference genes

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