Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 3.3e-289 997.7 503 100.0
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 3.4e-270 934.5 503 94.0
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 2.0e-230 802.4 512 80.9
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 2.5e-228 795.4 513 79.7
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 3.4e-225 785.0 503 79.9
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 5.9e-222 774.2 503 79.3
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 8.9e-218 760.4 467 82.4
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 8.1e-187 657.5 482 73.0
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 7.1e-167 591.3 475 63.8
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 1.5e-164 583.6 467 63.8
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 4.3e-164 582.0 494 59.9
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 1.6e-163 580.1 471 63.9
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 1.6e-163 580.1 471 63.5
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 2.8e-163 579.3 492 62.8
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 5.3e-162 575.1 491 61.7
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 2.9e-160 569.3 487 61.0
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 5.0e-160 568.5 477 61.4
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 6.5e-160 568.2 482 61.6
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 2.5e-159 566.2 465 62.6
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 3.2e-159 565.8 510 58.8
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 7.2e-159 564.7 481 60.7
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 7.9e-158 561.2 488 59.2
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 1.3e-157 560.5 492 59.8
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 2.3e-157 559.7 389 70.2
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 5.1e-157 558.5 462 63.0
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.1e-156 557.4 468 61.3
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 1.9e-156 556.6 468 61.3
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 5.7e-156 555.1 451 63.4
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.3e-155 553.9 472 59.5
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.2e-155 553.1 460 61.3
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.2e-155 553.1 460 61.1
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.2e-155 553.1 469 59.9
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 2.2e-155 553.1 465 60.0
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.4e-154 550.4 472 59.1
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 1.4e-154 550.4 457 61.1
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 2.4e-154 549.7 496 58.7
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 4.1e-154 548.9 464 60.6
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 1.5e-153 547.0 468 59.6
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 2.6e-153 546.2 503 57.3
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 1.3e-152 543.9 399 67.9
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 1.7e-152 543.5 471 58.8
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 3.8e-152 542.3 468 60.7
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 1.4e-151 540.4 457 59.5
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 1.9e-151 540.0 474 59.7
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 2.5e-151 539.7 461 60.5
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 5.5e-151 538.5 479 58.9
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 1.2e-150 537.3 440 61.6
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 1.2e-150 537.3 459 59.0
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 1.6e-150 537.0 452 58.6
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 1.6e-150 537.0 444 60.6
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 3.6e-150 535.8 455 59.3
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.6e-150 535.4 407 63.9
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.1e-150 535.0 407 63.9
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 6.1e-150 535.0 471 60.1
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 8.8e-149 531.2 454 59.9
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.1e-148 530.8 451 59.6
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 1.1e-148 530.8 460 60.4
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 2.0e-148 530.0 462 58.7
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 7.4e-148 528.1 453 60.0
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 3.7e-147 525.8 467 57.6
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 8.2e-147 524.6 473 59.0
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 6.9e-146 521.5 460 59.6
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 1.2e-145 520.8 486 57.4
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.2e-145 520.8 472 57.4
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 1.2e-145 520.8 450 58.9
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 2.0e-145 520.0 450 58.0
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 4.5e-145 518.8 460 58.3
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 5.9e-145 518.5 480 56.5
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 7.7e-145 518.1 468 59.4
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.3e-144 517.3 465 57.2
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 3.8e-144 515.8 468 56.0
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 1.1e-143 514.2 447 58.4
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 5.5e-143 511.9 476 55.7
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 8.8e-141 504.6 458 56.6
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 1.1e-140 504.2 486 56.0
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 5.7e-140 501.9 488 55.1
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 1.3e-136 490.7 349 67.0
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 1.7e-136 490.3 454 58.1
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 2.5e-135 486.5 471 56.5
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 9.4e-135 484.6 475 55.4
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 3.6e-134 482.6 463 54.4
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 1.8e-133 480.3 455 56.7
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 2.3e-133 479.9 448 56.0
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 4.0e-133 479.2 458 56.1
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 4.4e-132 475.7 448 56.0
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 9.7e-132 474.6 448 55.8
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.3e-131 474.2 405 59.8
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 3.1e-130 469.5 448 56.5
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 1.2e-129 467.6 453 55.4
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 5.9e-129 465.3 453 55.6
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 6.5e-128 461.8 451 56.8
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 2.5e-127 459.9 448 55.6
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.7e-123 447.2 332 66.0
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 1.2e-116 424.5 454 50.9
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 1.1e-114 417.9 488 48.4
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 5.4e-114 415.6 500 46.6
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 7.0e-114 415.2 325 62.5
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 1.2e-113 414.5 450 49.8
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 4.3e-111 406.0 438 52.7
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 3.4e-108 396.4 406 51.2
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 2.5e-103 380.2 380 50.0
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 1.6e-97 360.9 401 48.6
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 3.0e-88 330.1 349 53.6
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.9e-79 300.8 215 67.0
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 1.4e-69 268.1 393 39.7
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 5.4e-66 256.1 192 62.5
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 3.0e-64 250.4 353 46.7
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 3.1e-61 240.4 206 64.1
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 4.9e-59 233.0 198 62.1
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 2.1e-41 174.5 318 33.6
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 2.0e-39 167.9 106 77.4
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 3.5e-28 130.6 139 54.7
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.7e-25 120.2 155 48.4
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 1.8e-21 108.2 234 30.3
VMungo0331G1801 Vigna mungo HOM05D002295 ORTHO05D008356 5.5e-18 96.7 80 61.2
CBR_g51330 Chara braunii HOM05D009772 ORTHO05D000353 7.2e-18 96.3 289 24.2
vmacro02831 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.8e-16 91.7 120 50.0
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 1.2e-09 68.9 114 30.7
TAR381G0468 Trochodendron aralioides HOM05D006770 ORTHO05D008356 4.7e-09 67.0 89 47.2
EL10Ac2g03340 Beta vulgaris HOM05D005973 ORTHO05D007285 1.0e-08 65.9 94 36.2
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 5.2e-08 63.5 85 38.8
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 6.8e-08 63.2 129 27.9
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 2.0e-07 61.6 129 26.4
CDE07G1469 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 7.5e-07 59.7 158 24.1
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 9.8e-07 59.3 121 26.4
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 1.3e-06 58.9 118 25.4
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 1.3e-06 58.9 118 25.4
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 3.7e-06 57.4 117 27.4
CANSAT11G0661 Cannabis sativa HOM05D003056 ORTHO05D003422 6.3e-06 56.6 154 25.3


User provided reference genes

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