Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001223g0060 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.2e-60 235.0 122 100.0
Nitab4.5_0000235g0150 Nicotiana tabacum HOM05D011531 ORTHO05D012843 4.7e-48 194.5 123 82.1
Nitab4.5_0000188g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 8.0e-48 193.7 123 81.3
Nitab4.5_0004435g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 1.8e-47 192.6 123 80.5
Nitab4.5_0018599g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 4.0e-47 191.4 123 80.5
Nitab4.5_0000235g0160 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.4e-46 188.3 123 79.7
Nitab4.5_0003371g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 9.8e-46 186.8 123 78.0
Nitab4.5_0009492g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.1e-39 165.2 101 82.2
CAN.G424.67 Capsicum annuum HOM05D011531 ORTHO05D012843 9.9e-30 133.7 122 62.3
Nitab4.5_0009438g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 8.1e-24 114.0 59 89.8
PGSC0003DMG400013878 Solanum tuberosum HOM05D011531 ORTHO05D012843 2.6e-22 109.0 83 65.1
PGSC0003DMG400045733 Solanum tuberosum HOM05D011531 ORTHO05D012843 2.4e-20 102.4 117 53.8
Sopen02g024380 Solanum pennellii HOM05D011531 ORTHO05D012843 4.2e-20 101.7 117 54.7
Sopen10g033250 Solanum pennellii HOM05D011531 ORTHO05D393179 3.6e-16 88.6 121 38.8
Nitab4.5_0000132g0460 Nicotiana tabacum HOM05D011531 ORTHO05D000959 2.2e-13 79.3 118 44.1
PGSC0003DMG400022338 Solanum tuberosum HOM05D011531 ORTHO05D012843 1.9e-12 76.3 64 59.4
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 1.2e-11 73.6 124 40.3
Peaxi162Scf00610g00115 Petunia axillaris HOM05D000519 ORTHO05D000959 3.0e-10 68.9 97 42.3
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 3.9e-10 68.6 97 43.3
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 3.9e-10 68.6 123 39.8
Nitab4.5_0005135g0030 Nicotiana tabacum HOM05D000519 ORTHO05D000959 6.7e-10 67.8 97 44.3
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 6.7e-10 67.8 97 43.3
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 8.7e-10 67.4 83 42.2
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 8.7e-10 67.4 97 43.3
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 1.9e-09 66.2 97 42.3
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 1.9e-09 66.2 97 43.3
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 2.5e-09 65.9 97 42.3
Nitab4.5_0003626g0060 Nicotiana tabacum HOM05D015638 ORTHO05D016886 7.4e-09 64.3 138 37.0
Nitab4.5_0007568g0010 Nicotiana tabacum HOM05D015638 ORTHO05D016886 2.1e-08 62.8 138 37.7
Oeu009403.1 Olea europaea HOM05D020212 ORTHO05D012843 1.4e-07 60.1 122 35.2
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 1.4e-07 60.1 99 39.4
Oeu009402.1 Olea europaea HOM05D020212 ORTHO05D012843 3.1e-07 58.9 122 35.2
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 4.0e-07 58.5 99 38.4
SalBow8G0429 Salvia bowleyana HOM05D000519 ORTHO05D000959 9.0e-07 57.4 125 36.8
Solyc05g054120.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 9.0e-07 57.4 98 41.8
CAN.G1186.46 Capsicum annuum HOM05D015638 ORTHO05D016886 1.2e-06 57.0 127 35.4
Nitab4.5_0000143g0140 Nicotiana tabacum HOM05D000519 ORTHO05D016886 1.5e-06 56.6 126 34.9
Sopen11g007140 Solanum pennellii HOM05D000519 ORTHO05D000959 1.5e-06 56.6 123 35.0
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 2.0e-06 56.2 112 37.5
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 2.0e-06 56.2 112 37.5
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 2.0e-06 56.2 99 36.4
Sopen11g007130 Solanum pennellii HOM05D015638 ORTHO05D016886 2.0e-06 56.2 131 34.4
Hma1.2p1_0657F.1_g197050 Hydrangea macrophylla HOM05D000519 ORTHO05D000959 2.6e-06 55.8 123 35.0
PGSC0003DMG400047215 Solanum tuberosum HOM05D000519 ORTHO05D000959 2.6e-06 55.8 121 32.2
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 3.4e-06 55.5 100 37.0
CAN.G5949.1 Capsicum annuum HOM05D000519 ORTHO05D000959 3.4e-06 55.5 124 34.7
Solyc11g012385.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 3.4e-06 55.5 123 34.1
CAN.G696.24 Capsicum annuum HOM05D000519 ORTHO05D000959 5.8e-06 54.7 112 37.5
CAN.G696.25 Capsicum annuum HOM05D000519 ORTHO05D000959 5.8e-06 54.7 112 37.5
PGSC0003DMG400008460 Solanum tuberosum HOM05D000519 ORTHO05D000959 7.6e-06 54.3 102 41.2
CSS0049006 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 1.0e-05 53.9 105 39.0
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 1.0e-05 53.9 76 44.7


User provided reference genes

Program Settings