Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 2.4e-198 695.3 344 100.0
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 4.5e-189 664.5 349 95.7
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 1.7e-183 646.0 344 91.3
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 1.4e-182 642.9 344 90.4
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 1.4e-182 642.9 346 90.5
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 2.4e-182 642.1 345 90.1
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 6.6e-156 554.3 344 77.3
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.8e-153 546.2 345 75.7
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 5.2e-153 544.7 345 77.7
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 3.4e-152 542.0 342 72.8
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 7.6e-152 540.8 344 75.6
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 4.2e-150 535.0 344 72.7
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 6.6e-148 527.7 343 75.2
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 1.5e-147 526.6 349 73.9
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 3.3e-147 525.4 345 73.9
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 4.3e-147 525.0 330 76.4
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 4.3e-147 525.0 345 73.3
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 7.3e-147 524.2 373 70.0
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.6e-146 521.9 346 73.1
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.8e-145 519.6 345 73.0
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 4.0e-145 518.5 344 72.1
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 1.2e-144 516.9 347 74.1
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 3.4e-144 515.4 345 71.3
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 9.9e-144 513.8 345 72.5
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.7e-143 513.1 345 72.5
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.1e-142 510.4 345 71.3
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 1.9e-142 509.6 306 79.1
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 1.6e-141 506.5 345 70.4
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 3.5e-141 505.4 375 66.7
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 4.6e-141 505.0 354 70.3
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 4.6e-141 505.0 345 68.4
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 7.9e-141 504.2 349 71.3
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 1.3e-140 503.4 354 70.3
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 1.7e-140 503.1 345 70.1
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.5e-139 500.0 349 69.9
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 1.9e-139 499.6 348 71.6
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 4.3e-139 498.4 349 70.5
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 9.6e-139 497.3 339 70.8
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 2.8e-138 495.7 345 71.3
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 4.8e-138 495.0 349 70.8
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 1.1e-137 493.8 349 69.9
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 1.8e-137 493.0 346 70.5
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 1.8e-137 493.0 345 70.7
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.8e-137 493.0 348 68.7
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 3.1e-137 492.3 343 70.3
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.2e-136 490.3 348 69.0
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 1.5e-136 490.0 353 70.0
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 2.6e-136 489.2 338 69.2
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 3.4e-136 488.8 344 69.2
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 7.6e-136 487.6 345 68.7
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 9.9e-136 487.3 346 69.7
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 1.3e-135 486.9 345 68.7
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 1.7e-135 486.5 342 69.0
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 8.4e-135 484.2 344 69.8
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 8.4e-135 484.2 344 71.5
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.2e-134 482.3 317 73.2
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 3.2e-134 482.3 304 75.0
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 9.3e-134 480.7 347 68.0
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 6.0e-133 478.0 298 76.8
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 6.0e-133 478.0 345 68.1
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 7.9e-133 477.6 344 68.6
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 3.9e-132 475.3 315 74.0
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 3.9e-132 475.3 315 74.6
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.9e-131 473.0 350 66.6
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.5e-131 472.6 315 73.7
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 2.1e-130 469.5 311 73.3
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 2.1e-130 469.5 311 73.3
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.1e-130 469.5 305 73.4
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 2.1e-130 469.5 306 73.2
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 2.8e-130 469.2 315 72.7
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 4.8e-130 468.4 315 73.7
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 6.2e-130 468.0 345 68.4
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.8e-129 466.5 345 67.8
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 4.0e-129 465.3 279 76.3
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 5.3e-129 464.9 347 67.7
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.2e-128 463.8 345 67.2
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 1.2e-128 463.8 342 65.8
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 2.0e-128 463.0 379 61.7
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 2.7e-125 452.6 280 75.7
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 4.6e-125 451.8 309 72.2
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 6.7e-124 448.0 350 64.3
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 2.8e-122 442.6 351 63.2
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 1.8e-121 439.9 311 69.8
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 1.8e-121 439.9 312 68.6
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 5.3e-121 438.3 285 74.0
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 6.9e-121 438.0 328 64.6
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.6e-120 436.0 279 74.6
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 2.6e-120 436.0 314 68.8
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 2.6e-120 436.0 312 68.9
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 3.4e-120 435.6 311 69.1
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 7.6e-120 434.5 307 66.8
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 3.8e-119 432.2 311 68.5
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 3.8e-119 432.2 330 62.4
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 5.0e-119 431.8 338 63.3
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 6.5e-119 431.4 340 64.4
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 8.4e-119 431.0 312 67.9
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.5e-118 429.5 279 74.6
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 2.5e-118 429.5 286 73.1
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 4.2e-118 428.7 311 67.5
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 4.2e-118 428.7 341 62.2
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 3.9e-116 422.2 314 63.1
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 8.7e-116 421.0 306 67.6
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 1.5e-115 420.2 340 60.3
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 5.7e-115 418.3 314 63.7
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.7e-115 418.3 314 63.4
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 8.2e-114 414.5 314 63.7
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 1.4e-113 413.7 350 62.3
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.4e-113 412.9 342 59.9
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 6.9e-113 411.4 327 61.2
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.5e-112 410.2 314 62.7
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 1.5e-112 410.2 314 63.4
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 1.5e-112 410.2 314 63.4
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 2.0e-112 409.8 314 63.1
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 3.8e-111 405.6 306 63.4
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 6.5e-111 404.8 314 62.4
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.1e-109 399.8 340 61.5
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 3.8e-103 379.0 314 62.4
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.5e-102 375.2 282 62.1
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 9.4e-102 374.4 308 62.7
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 1.6e-101 373.6 385 53.0
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 3.9e-100 369.0 251 70.5
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 6.7e-100 368.2 260 68.1
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 7.4e-99 364.8 303 56.1
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 9.7e-99 364.4 341 57.5
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.3e-98 364.0 361 55.4
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 3.7e-98 362.5 309 56.3
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 4.8e-98 362.1 341 57.2
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 9.1e-97 357.8 345 56.2
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 3.5e-96 355.9 303 56.8
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 7.2e-94 348.2 327 54.1
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 5.7e-91 338.6 345 54.8
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 1.6e-88 330.5 235 65.5
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 2.0e-88 330.1 318 51.6
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 2.3e-84 316.6 309 51.5
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 3.4e-83 312.8 335 48.1
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 2.8e-82 309.7 320 55.0
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.1e-78 297.7 284 53.2
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.7e-77 293.1 232 64.7
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.6e-77 292.7 204 71.6
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.2e-75 287.7 164 81.1
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.7e-66 256.1 203 64.5
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 7.5e-59 231.9 140 77.9
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 4.9e-58 229.2 170 61.2
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 4.9e-58 229.2 170 61.2
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.9e-47 193.0 112 81.2
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 4.7e-45 186.0 324 33.6
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 9.2e-41 171.8 314 36.6
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.6e-40 171.0 109 74.3
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.9e-39 166.4 111 69.4
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 2.9e-34 150.2 332 31.3
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.2e-32 144.8 164 48.8
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.5e-27 127.9 129 50.4
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.9e-25 120.9 84 69.0
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 5.1e-23 112.8 247 31.6
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 3.6e-21 106.7 166 39.8
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 2.6e-19 100.5 286 27.6
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 4.2e-17 93.2 105 45.7
FAN23G0103 Fragaria x ananassa HOM05D004652 ORTHO05D198901 8.7e-07 58.9 118 34.7


User provided reference genes

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