Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001219g0170 Nicotiana tabacum HOM05D003778 ORTHO05D004418 0.0e+00 1183.3 578 100.0
Nitab4.5_0008761g0020 Nicotiana tabacum HOM05D003778 ORTHO05D004418 0.0e+00 1121.7 566 96.5
Solyc02g069490.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 0.0e+00 1085.9 565 92.2
Peaxi162Scf00833g00024 Petunia axillaris HOM05D003778 ORTHO05D004418 0.0e+00 1084.7 564 93.1
Sopen02g018630 Solanum pennellii HOM05D003778 ORTHO05D004418 1.9e-309 1065.1 567 90.5
CAN.G675.20 Capsicum annuum HOM05D003778 ORTHO05D004418 4.8e-308 1060.4 567 91.2
PGSC0003DMG400021142 Solanum tuberosum HOM05D003778 ORTHO05D004418 1.8e-307 1058.5 567 89.8
CAN.G1362.14 Capsicum annuum HOM05D003778 ORTHO05D004418 2.7e-295 1018.1 564 86.0
Nitab4.5_0000265g0030 Nicotiana tabacum HOM05D003778 ORTHO05D004418 1.9e-288 995.3 566 83.4
CAN.G79.46 Capsicum annuum HOM05D003778 ORTHO05D004418 7.4e-285 983.4 564 82.6
Peaxi162Scf01123g00017 Petunia axillaris HOM05D003778 ORTHO05D004418 1.7e-284 982.2 563 81.5
CiPaw.06G057600 Carya illinoinensis HOM05D003778 ORTHO05D004418 3.8e-281 971.1 564 82.6
vmacro00468 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 8.5e-281 969.9 564 81.7
SGA_v2.0_scaffold223G42894 Striga asiatica HOM05D003778 ORTHO05D004418 3.2e-280 968.0 576 80.7
Gohir.D13G024700 Gossypium hirsutum HOM05D003778 ORTHO05D004418 5.5e-280 967.2 563 81.7
Gorai.013G027900 Gossypium raimondii HOM05D003778 ORTHO05D004418 7.2e-280 966.8 563 81.7
PGSC0003DMG400011801 Solanum tuberosum HOM05D003778 ORTHO05D004418 1.6e-279 965.7 552 81.7
Sc06g0007850 Simmondsia chinensis HOM05D003778 ORTHO05D004418 2.1e-279 965.3 560 81.6
Gohir.A13G026100 Gossypium hirsutum HOM05D003778 ORTHO05D004418 6.1e-279 963.8 563 81.2
Potri.008G084800 Populus trichocarpa HOM05D003778 ORTHO05D004418 1.0e-278 963.0 556 82.6
PGR004G0624 Punica granatum HOM05D003778 ORTHO05D004418 1.0e-278 963.0 564 81.4
Ciclev10030984m.g Citrus clementina HOM05D003778 ORTHO05D004418 1.4e-278 962.6 574 79.6
Haze_11725 Corylus avellana HOM05D003778 ORTHO05D004418 2.3e-278 961.8 569 80.1
Sabra08G0063000 Salix brachista HOM05D003778 ORTHO05D004418 3.0e-278 961.4 563 81.5
Peaxi162Scf00695g00218 Petunia axillaris HOM05D003778 ORTHO05D004418 1.1e-277 959.5 565 82.7
Potri.010G170000 Populus trichocarpa HOM05D003778 ORTHO05D004418 1.1e-277 959.5 556 82.6
Sopen02g009490 Solanum pennellii HOM05D003778 ORTHO05D004418 1.1e-277 959.5 551 82.0
arahy.Tifrunner.gnm1.ann1.G65HTE Arachis hypogaea HOM05D003778 ORTHO05D004418 1.5e-277 959.1 564 80.7
CANSAT78G1874 Cannabis sativa HOM05D003778 ORTHO05D004418 1.5e-277 959.1 564 80.9
QL03p043582 Quercus lobata HOM05D003778 ORTHO05D004418 1.5e-277 959.1 564 81.0
MD13G1007700 Malus domestica HOM05D003778 ORTHO05D004418 2.0e-277 958.7 565 80.5
Manes.03G081200 Manihot esculenta HOM05D003778 ORTHO05D004418 3.3e-277 958.0 556 81.8
COL.COLO4_27669 Corchorus olitorius HOM05D003778 ORTHO05D004418 5.7e-277 957.2 563 81.2
MD16G1000400 Malus domestica HOM05D003778 ORTHO05D004418 5.7e-277 957.2 564 80.3
Dinv17604 Davidia involucrata HOM05D003778 ORTHO05D004418 1.3e-276 956.1 564 80.5
Prupe.1G345300 Prunus persica HOM05D003778 ORTHO05D004418 2.8e-276 954.9 569 79.6
Thecc.02G311500 Theobroma cacao HOM05D003778 ORTHO05D004418 3.7e-276 954.5 564 81.4
TWI74G0502 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 3.7e-276 954.5 564 80.9
Atru.chr11.1231 Acer truncatum HOM05D003778 ORTHO05D004418 8.2e-276 953.4 564 80.1
Atru.chr11.1319 Acer truncatum HOM05D003778 ORTHO05D004418 8.2e-276 953.4 564 80.1
Rhsim09G0073500 Rhododendron simsii HOM05D003778 ORTHO05D004418 8.2e-276 953.4 564 80.3
TWI77G0069 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 1.4e-275 952.6 564 80.3
Eucgr.J00851 Eucalyptus grandis HOM05D003778 ORTHO05D004418 3.1e-275 951.4 564 80.0
Duzib248G0532 Durio zibethinus HOM05D003778 ORTHO05D004418 7.0e-275 950.3 563 80.6
Rhsim09G0073400 Rhododendron simsii HOM05D003778 ORTHO05D004418 9.1e-275 949.9 564 80.1
Hund24279 Selenicereus undatus HOM05D003778 ORTHO05D004418 9.1e-275 949.9 569 79.4
Sabra10G0129800 Salix brachista HOM05D003778 ORTHO05D004418 1.6e-274 949.1 556 81.8
TAR035G0003 Trochodendron aralioides HOM05D003778 ORTHO05D004418 2.6e-274 948.3 564 79.8
Cc09_g06490 Coffea canephora HOM05D003778 ORTHO05D004418 4.5e-274 947.6 562 80.1
MSTRG.16322 Avicennia marina HOM05D003778 ORTHO05D004418 7.7e-274 946.8 563 80.5
TAR629G2113 Trochodendron aralioides HOM05D003778 ORTHO05D004418 7.7e-274 946.8 564 79.6
Actinidia04080 Actinidia chinensis HOM05D003778 ORTHO05D004418 1.7e-273 945.7 564 78.9
VMungo1127G1615 Vigna mungo HOM05D003778 ORTHO05D004418 1.7e-273 945.7 564 79.3
arahy.Tifrunner.gnm1.ann1.J2YHHP Arachis hypogaea HOM05D003778 ORTHO05D004418 2.2e-273 945.3 564 80.0
SalBow8G3862 Salvia bowleyana HOM05D003778 ORTHO05D004418 2.2e-273 945.3 563 79.6
Solyc02g030170.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 2.9e-273 944.9 534 83.0
Migut.M01947 Erythranthe guttata HOM05D003778 ORTHO05D004418 5.0e-273 944.1 564 80.0
Glyma.11G103500 Glycine max HOM05D003778 ORTHO05D004418 8.5e-273 943.3 564 79.3
SalBow2G0375 Salvia bowleyana HOM05D003778 ORTHO05D004418 1.1e-272 943.0 563 79.4
Peaxi162Scf00312g00221 Petunia axillaris HOM05D003778 ORTHO05D004418 1.5e-272 942.6 565 81.4
Lj3g0022719 Lotus japonicus HOM05D003778 ORTHO05D004418 4.2e-272 941.0 564 79.1
PSO017G4886 Papaver somniferum HOM05D003778 ORTHO05D004418 1.6e-271 939.1 563 79.8
PSO478G4461 Papaver somniferum HOM05D003778 ORTHO05D004418 1.6e-271 939.1 563 79.8
CSS0038233 Camellia sinensis var. sinensis HOM05D003778 ORTHO05D004418 3.6e-271 937.9 564 79.3
Lj6A722T93 Lonicera japonica HOM05D003778 ORTHO05D004418 4.7e-271 937.6 566 79.5
AUR62017664 Chenopodium quinoa HOM05D003778 ORTHO05D004418 6.1e-271 937.2 549 79.6
Ah.01g001630 Amaranthus hybridus HOM05D003778 ORTHO05D004418 1.0e-270 936.4 563 78.2
Lalb_Chr01g0001531 Lupinus albus HOM05D003778 ORTHO05D004418 1.0e-270 936.4 564 78.9
Phvul.011G031700 Phaseolus vulgaris HOM05D003778 ORTHO05D004418 1.4e-270 936.0 564 78.5
ClCG09G004610 Citrullus lanatus HOM05D003778 ORTHO05D004418 1.8e-270 935.6 564 78.4
AUR62015201 Chenopodium quinoa HOM05D003778 ORTHO05D004418 5.2e-270 934.1 549 79.4
CDE05G2073 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 2.6e-269 931.8 561 78.6
DCAR_002565 Daucus carota HOM05D003778 ORTHO05D004418 7.5e-269 930.2 563 78.7
Lalb_Chr03g0024881 Lupinus albus HOM05D003778 ORTHO05D004418 1.3e-268 929.5 564 78.9
MBI03_g24012_MAGBIO Magnolia biondii HOM05D003778 ORTHO05D004418 1.3e-268 929.5 564 78.4
DCAR_030405 Daucus carota HOM05D003778 ORTHO05D004418 8.2e-268 926.8 563 78.7
TPR.G21559 Trifolium pratense HOM05D003778 ORTHO05D004418 1.4e-267 926.0 564 77.7
THA.LOC104804923 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 1.6e-266 922.5 561 79.1
SEGI_38803 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 5.9e-266 920.6 565 76.6
ATR0618G344 Amborella trichopoda HOM05D003778 ORTHO05D004418 7.7e-266 920.2 564 76.8
Ca_03035_v3 Cicer arietinum L. HOM05D003778 ORTHO05D004418 7.7e-266 920.2 564 77.8
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 7.7e-266 920.2 570 78.4
Psat7g174000 Pisum sativum HOM05D003778 ORTHO05D004418 1.3e-265 919.5 564 77.3
Aqoxy3G04278 Aquilegia oxysepala HOM05D003778 ORTHO05D004418 1.7e-265 919.1 564 77.5
BcaC05g28402 Brassica carinata HOM05D003778 ORTHO05D004418 2.9e-265 918.3 564 78.0
A05p29300 Brassica napus HOM05D003778 ORTHO05D004418 2.9e-265 918.3 564 78.0
C05p44820 Brassica napus HOM05D003778 ORTHO05D004418 2.9e-265 918.3 564 78.0
BraA05t21813Z Brassica rapa HOM05D003778 ORTHO05D004418 6.5e-265 917.1 564 77.8
AL3G33330 Arabidopsis lyrata HOM05D003778 ORTHO05D004418 1.1e-264 916.4 564 77.5
BolC5t33208H Brassica oleracea HOM05D003778 ORTHO05D004418 1.5e-264 916.0 564 77.8
BcaB06g26051 Brassica carinata HOM05D003778 ORTHO05D004418 1.9e-264 915.6 564 77.7
MELO3C023603.2 Cucumis melo HOM05D003778 ORTHO05D004418 1.9e-264 915.6 564 75.9
Medtr4g074350 Medicago truncatula HOM05D003778 ORTHO05D004418 1.9e-264 915.6 564 77.3
RcHm_v2.0_Chr4g0446441 Rosa chinensis HOM05D003778 ORTHO05D004418 1.9e-264 915.6 568 77.8
Sp3g17830 Schrenkiella parvula HOM05D003778 ORTHO05D004418 1.9e-264 915.6 564 77.3
Sed0012416 Sechium edule HOM05D003778 ORTHO05D004418 1.9e-264 915.6 565 77.5
A01p34930 Brassica napus HOM05D003778 ORTHO05D004418 3.2e-264 914.8 564 77.3
C01p44340 Brassica napus HOM05D003778 ORTHO05D004418 5.5e-264 914.1 564 77.1
BolC1t04399H Brassica oleracea HOM05D003778 ORTHO05D004418 5.5e-264 914.1 564 77.1
FvH4_4g36730 Fragaria vesca HOM05D003778 ORTHO05D004418 5.5e-264 914.1 566 77.9
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 5.5e-264 914.1 566 77.9
Thhalv10020412m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 7.2e-264 913.7 564 77.1
Carub.0003s1970 Capsella rubella HOM05D003778 ORTHO05D004418 9.4e-264 913.3 564 76.6
Zm00001eb228910 Zea mays HOM05D003778 ORTHO05D004418 1.2e-263 912.9 552 78.8
AT3G19820 Arabidopsis thaliana HOM05D003778 ORTHO05D004418 1.6e-263 912.5 564 77.1
BraA01t03576Z Brassica rapa HOM05D003778 ORTHO05D004418 2.1e-263 912.1 564 77.0
CARHR095330 Cardamine hirsuta HOM05D003778 ORTHO05D004418 2.1e-263 912.1 564 76.4
Os10g0397400 Oryza sativa ssp. japonica HOM05D003778 ORTHO05D004418 2.1e-263 912.1 552 78.4
EL10Ac9g22920 Beta vulgaris HOM05D003778 ORTHO05D004418 6.1e-263 910.6 567 75.7
HanXRQChr13g0388101 Helianthus annuus HOM05D003778 ORTHO05D004418 6.1e-263 910.6 568 76.8
Aa31LG8G6590 Aethionema arabicum HOM05D003778 ORTHO05D004418 8.0e-263 910.2 564 77.0
ECA233G5967 Erigeron canadensis HOM05D003778 ORTHO05D004418 1.5e-261 906.0 565 77.0
CsaV3_7G030530 Cucumis sativus L. HOM05D003778 ORTHO05D004418 2.0e-261 905.6 564 75.2
Sp1g37100 Schrenkiella parvula HOM05D003778 ORTHO05D004418 4.4e-261 904.4 564 77.1
ECA234G2331 Erigeron canadensis HOM05D003778 ORTHO05D004418 2.2e-260 902.1 557 77.2
Lj6g0014800 Lotus japonicus HOM05D003778 ORTHO05D004418 6.3e-260 900.6 564 76.8
HanXRQChr01g0028571 Helianthus annuus HOM05D003778 ORTHO05D004418 1.1e-259 899.8 556 76.8
THA.LOC104815230 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 3.1e-259 898.3 564 75.7
Lsat_1_v5_gn_8_32421 Lactuca sativa HOM05D003778 ORTHO05D004418 2.7e-258 895.2 561 76.8
A06p03260 Brassica napus HOM05D003778 ORTHO05D004418 1.0e-257 893.3 564 76.2
BraA06t23537Z Brassica rapa HOM05D003778 ORTHO05D004418 2.2e-257 892.1 564 76.1
CsaV3_4G009240 Cucumis sativus L. HOM05D003778 ORTHO05D004418 5.0e-257 891.0 564 74.6
Lsat_1_v5_gn_4_26521 Lactuca sativa HOM05D003778 ORTHO05D004418 6.5e-257 890.6 565 75.6
Lj6g0026630 Lotus japonicus HOM05D003778 ORTHO05D004418 8.5e-257 890.2 569 74.9
ClCG07G016390 Citrullus lanatus HOM05D003778 ORTHO05D004418 1.9e-256 889.0 564 74.8
BolC6t35641H Brassica oleracea HOM05D003778 ORTHO05D004418 9.4e-256 886.7 564 75.9
Sed0007506 Sechium edule HOM05D003778 ORTHO05D004418 5.2e-254 880.9 564 73.2
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 1.1e-251 873.2 567 76.4
SMO367G0245 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 6.4e-244 847.4 553 72.0
C06p05320 Brassica napus HOM05D003778 ORTHO05D004418 3.2e-243 845.1 524 76.3
AagrBONN_evm.TU.Sc2ySwM_117.797 Anthoceros agrestis HOM05D003778 ORTHO05D004418 1.0e-241 840.1 563 70.2
BcaC08g43211 Brassica carinata HOM05D003778 ORTHO05D004418 1.8e-238 829.3 564 72.0
Mapoly0190s0010 Marchantia polymorpha HOM05D003778 ORTHO05D004418 3.4e-237 825.1 564 69.3
HanXRQChr15g0483641 Helianthus annuus HOM05D003778 ORTHO05D004418 4.4e-237 824.7 571 70.1
Lsat_1_v5_gn_3_32901 Lactuca sativa HOM05D003778 ORTHO05D004418 1.3e-236 823.2 551 71.3
Pp3c7_650 Physcomitrium patens HOM05D003778 ORTHO05D004418 1.4e-235 819.7 564 69.5
Pp3c11_26120 Physcomitrium patens HOM05D003778 ORTHO05D004418 9.2e-227 790.4 564 67.6
unitig_748.g7356 Utricularia gibba HOM05D003778 ORTHO05D004418 1.6e-226 789.6 560 70.2
MELO3C022613.2 Cucumis melo HOM05D003778 ORTHO05D004418 5.2e-222 774.6 469 77.0
Glyma.12G028300 Glycine max HOM05D003778 ORTHO05D004418 6.9e-206 721.1 418 81.3
AUR62018172 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.7e-204 716.5 425 78.8
GSVIVG01010184001 Vitis vinifera HOM05D003778 ORTHO05D004418 8.7e-185 651.0 563 59.3
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 4.1e-182 642.1 373 78.8
Oeu008711.1 Olea europaea HOM05D003778 ORTHO05D004418 1.9e-179 633.3 564 57.6
Mapoly0153s0024 Marchantia polymorpha HOM05D003778 ORTHO05D004418 1.6e-175 620.2 542 54.6
AagrBONN_evm.TU.Sc2ySwM_344.4140 Anthoceros agrestis HOM05D003778 ORTHO05D004418 8.5e-164 581.3 488 53.7
vmacro10903 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 1.5e-160 570.5 417 68.3
SEGI_20352 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 3.1e-158 562.8 522 50.8
CDE05G2099 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 1.5e-155 553.9 329 76.9
SMO347G0448 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 1.2e-146 524.2 418 56.7
Nn4g24924 Nelumbo nucifera HOM05D003778 ORTHO05D004418 1.1e-139 501.1 292 77.4
Nitab4.5_0000876g0110 Nicotiana tabacum HOM05D003778 ORTHO05D004418 1.7e-135 487.3 564 49.8
Nitab4.5_0012697g0010 Nicotiana tabacum HOM05D003778 ORTHO05D004418 6.3e-135 485.3 566 49.5
Zm00001eb190720 Zea mays HOM05D003778 ORTHO05D004418 3.1e-134 483.0 304 76.3
CDE05G1908 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 5.0e-116 422.5 468 51.3
CBR_g45591 Chara braunii HOM05D003778 ORTHO05D004418 2.3e-84 317.4 492 37.4
Thhalv10012112m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 1.6e-74 284.6 213 65.7
C06p05360 Brassica napus HOM05D003778 ORTHO05D004418 9.0e-73 278.9 549 36.1
BcaB04g19062 Brassica carinata HOM05D003778 ORTHO05D004418 1.4e-57 228.4 166 64.5
BcaC08g43207 Brassica carinata HOM05D003778 ORTHO05D004418 3.8e-55 220.3 147 71.4
BolC6t35639H Brassica oleracea HOM05D003778 ORTHO05D004418 7.2e-54 216.1 147 70.1
vmacro10902 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 1.8e-44 184.9 119 75.6
GSVIVG01028580001 Vitis vinifera HOM05D003778 ORTHO05D004418 1.8e-44 184.9 133 70.7
C03p50700 Brassica napus HOM05D003778 ORTHO05D004418 6.3e-42 176.4 166 58.4
GSVIVG01002973001 Vitis vinifera HOM05D003778 ORTHO05D004418 6.3e-42 176.4 128 69.5
Zm00001eb190730 Zea mays HOM05D003778 ORTHO05D004418 1.1e-41 175.6 124 64.5
C03p50680 Brassica napus HOM05D003778 ORTHO05D004418 2.4e-41 174.5 166 58.4
BolC3t17357H Brassica oleracea HOM05D003778 ORTHO05D004418 4.1e-41 173.7 166 58.4
Cfa024211 Carpinus fangiana HOM05D003778 ORTHO05D004418 9.1e-41 172.6 319 33.2
BolC3t17355H Brassica oleracea HOM05D003778 ORTHO05D004418 4.5e-40 170.2 166 57.8
Cfa023151 Carpinus fangiana HOM05D003778 ORTHO05D004418 1.2e-32 145.6 493 26.4
Gorai.005G150900 Gossypium raimondii HOM05D003778 ORTHO05D004418 6.8e-28 129.8 97 61.9
A03p41410 Brassica napus HOM05D003778 ORTHO05D004418 2.0e-27 128.3 213 38.5
PGSC0003DMG400004305 Solanum tuberosum HOM05D003778 ORTHO05D004418 4.4e-27 127.1 90 70.0
HanXRQChr08g0230901 Helianthus annuus HOM05D003778 ORTHO05D004418 2.8e-26 124.4 75 72.0
GSVIVG01033182001 Vitis vinifera HOM05D003778 ORTHO05D008307 1.8e-25 121.7 67 76.1
BcaC01g03602 Brassica carinata HOM05D003778 ORTHO05D004418 5.2e-20 103.6 184 37.5
A03p41420 Brassica napus HOM05D003778 ORTHO05D004418 4.9e-18 97.1 166 39.2
C06p05290 Brassica napus HOM05D003778 ORTHO05D033430 7.8e-16 89.7 53 69.8
BraA03t13295Z Brassica rapa HOM05D003778 ORTHO05D004418 1.5e-11 75.5 46 65.2
Duzib187G1275 Durio zibethinus HOM05D000597 ORTHO05D006307 7.3e-06 56.6 143 25.9
Cc08_g01180 Coffea canephora HOM05D000597 ORTHO05D006307 9.5e-06 56.2 121 28.9


User provided reference genes

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