Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 2.0e-46 188.7 92 100.0
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 2.6e-30 135.2 69 92.8
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 2.6e-30 135.2 69 92.8
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 2.2e-29 132.1 69 87.0
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 6.3e-29 130.6 67 91.0
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 6.3e-29 130.6 67 89.6
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 2.2e-26 122.1 67 82.1
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 2.9e-26 121.7 65 86.2
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 3.8e-26 121.3 69 79.7
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 5.0e-26 120.9 62 90.3
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 5.0e-26 120.9 67 82.1
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 5.0e-26 120.9 67 82.1
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 5.0e-26 120.9 64 85.9
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 6.5e-26 120.6 66 81.8
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 6.5e-26 120.6 70 81.4
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 6.5e-26 120.6 70 81.4
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.1e-25 119.8 67 80.6
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 2.5e-25 118.6 65 83.1
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 2.5e-25 118.6 65 83.1
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 2.5e-25 118.6 62 88.7
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 3.2e-25 118.2 65 81.5
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 3.2e-25 118.2 64 82.8
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 3.2e-25 118.2 61 85.2
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 7.2e-25 117.1 60 88.3
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 7.2e-25 117.1 66 80.3
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 7.2e-25 117.1 63 84.1
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 7.2e-25 117.1 63 84.1
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 9.4e-25 116.7 62 85.5
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.2e-24 116.3 66 80.3
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.2e-24 116.3 62 82.3
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.2e-24 116.3 66 78.8
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.6e-24 115.9 65 80.0
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.6e-24 115.9 62 85.5
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.6e-24 115.9 65 78.5
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.6e-24 115.9 58 87.9
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.6e-24 115.9 58 87.9
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 3.6e-24 114.8 65 80.0
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 3.6e-24 114.8 65 80.0
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 3.6e-24 114.8 69 76.8
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 4.7e-24 114.4 65 78.5
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 4.7e-24 114.4 68 80.9
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 6.1e-24 114.0 62 80.6
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 8.0e-24 113.6 65 78.5
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 8.0e-24 113.6 65 78.5
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 8.0e-24 113.6 65 78.5
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 8.0e-24 113.6 65 78.5
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 8.0e-24 113.6 65 78.5
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 8.0e-24 113.6 59 86.4
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 8.0e-24 113.6 62 83.9
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 8.0e-24 113.6 66 77.3
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 8.0e-24 113.6 65 80.0
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.0e-23 113.2 65 78.5
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 1.0e-23 113.2 65 78.5
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.0e-23 113.2 62 83.9
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.0e-23 113.2 62 83.9
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.0e-23 113.2 62 83.9
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.0e-23 113.2 62 83.9
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.0e-23 113.2 62 83.9
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 1.0e-23 113.2 62 80.6
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.4e-23 112.8 58 87.9
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.8e-23 112.5 65 76.9
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.8e-23 112.5 65 76.9
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 2.3e-23 112.1 65 76.9
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 2.3e-23 112.1 65 76.9
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 3.0e-23 111.7 65 76.9
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 3.0e-23 111.7 65 76.9
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 3.0e-23 111.7 58 82.8
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 3.0e-23 111.7 62 77.4
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 3.0e-23 111.7 66 77.3
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 5.2e-23 110.9 67 77.6
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 8.8e-23 110.2 65 73.8
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 8.8e-23 110.2 63 76.2
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.5e-22 109.4 66 77.3
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 1.5e-22 109.4 60 78.3
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.0e-22 109.0 58 82.8
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 2.6e-22 108.6 59 81.4
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.4e-22 107.8 65 72.3
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 7.5e-22 107.1 58 79.3
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.2e-21 105.5 57 82.5
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 2.8e-21 105.1 62 77.4
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.8e-21 104.4 65 72.3
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 4.8e-21 104.4 62 77.4
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 4.8e-21 104.4 66 68.2
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 6.3e-21 104.0 59 84.7
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 6.3e-21 104.0 63 71.4
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 8.3e-21 103.6 55 83.6
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 3.1e-20 101.7 67 73.1
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 3.1e-20 101.7 69 71.0
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 1.2e-19 99.8 95 53.7
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 2.5e-17 92.0 62 72.6
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 2.1e-16 89.0 64 60.9
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 3.6e-16 88.2 60 71.7
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.5e-14 82.8 58 67.2
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 4.4e-14 81.3 44 81.8
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 4.9e-13 77.8 47 72.3
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.6e-11 72.8 38 84.2
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.0e-10 70.1 36 83.3
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 1.0e-10 70.1 38 78.9
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.3e-10 69.7 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.3e-10 69.7 36 83.3
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 2.3e-10 68.9 58 51.7
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 3.8e-10 68.2 43 69.8
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.1e-09 66.6 52 51.9
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.1e-09 66.6 52 51.9
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.5e-09 66.2 36 80.6
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 7.3e-09 63.9 53 52.8


User provided reference genes

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