Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.5e-59 232.6 120 100.0
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.3e-45 186.4 98 95.9
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 1.1e-44 183.3 119 80.7
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 2.4e-44 182.2 124 78.2
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 9.4e-41 170.2 119 75.6
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 2.1e-40 169.1 119 75.6
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 2.1e-40 169.1 119 75.6
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 3.9e-39 164.9 117 74.4
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 3.3e-38 161.8 115 73.9
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 2.8e-37 158.7 117 73.5
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 3.7e-37 158.3 117 70.1
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 1.1e-36 156.8 118 69.5
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 2.4e-36 155.6 117 70.1
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 2.4e-36 155.6 115 72.2
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 3.1e-36 155.2 131 65.6
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 9.1e-36 153.7 89 89.9
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.2e-35 153.3 131 64.1
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.5e-35 152.9 119 67.2
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 2.0e-35 152.5 117 70.9
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 2.0e-35 152.5 119 68.9
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.6e-35 152.1 131 63.4
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 4.5e-35 151.4 118 70.3
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 5.9e-35 151.0 131 63.4
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 7.7e-35 150.6 122 66.4
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 7.7e-35 150.6 117 68.4
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 1.0e-34 150.2 114 64.0
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 1.3e-34 149.8 117 68.4
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 2.2e-34 149.1 118 70.3
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 8.5e-34 147.1 117 66.7
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 8.5e-34 147.1 117 64.1
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 1.9e-33 146.0 117 65.8
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 3.2e-33 145.2 117 66.7
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 5.5e-33 144.4 117 64.1
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 5.5e-33 144.4 117 63.2
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 9.4e-33 143.7 117 62.4
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.2e-32 143.3 117 65.8
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 2.7e-32 142.1 117 65.0
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 6.1e-32 141.0 115 65.2
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 8.0e-32 140.6 116 66.4
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.0e-31 140.2 117 64.1
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 1.0e-31 140.2 115 65.2
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 2.3e-31 139.0 117 65.8
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 2.3e-31 139.0 117 63.2
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 8.8e-31 137.1 117 61.5
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 7.4e-30 134.0 117 60.7
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.8e-29 131.3 123 59.3
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 4.8e-29 131.3 118 56.8
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 6.3e-29 131.0 116 59.5
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 8.2e-29 130.6 115 62.6
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 8.2e-29 130.6 107 63.6
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.1e-28 130.2 102 64.7
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.4e-28 129.8 116 61.2
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 1.8e-28 129.4 109 62.4
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 2.4e-28 129.0 116 56.9
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 2.4e-28 129.0 117 61.5
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 2.4e-28 129.0 116 56.9
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 3.1e-28 128.6 117 60.7
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 4.1e-28 128.3 116 55.2
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 4.1e-28 128.3 99 67.7
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 7.0e-28 127.5 114 58.8
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 7.0e-28 127.5 115 59.1
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 7.0e-28 127.5 117 59.0
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 7.0e-28 127.5 116 56.0
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.2e-27 126.7 114 58.8
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.2e-27 126.7 116 58.6
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.2e-27 126.7 116 57.8
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.6e-27 126.3 113 54.0
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 2.0e-27 125.9 108 62.0
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 4.5e-27 124.8 133 51.9
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 5.9e-27 124.4 115 56.5
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 5.9e-27 124.4 102 62.7
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 5.9e-27 124.4 116 59.5
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 7.7e-27 124.0 114 53.5
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 7.7e-27 124.0 115 57.4
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 7.7e-27 124.0 119 55.5
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 7.7e-27 124.0 133 52.6
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 1.0e-26 123.6 115 59.1
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 1.3e-26 123.2 115 59.1
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 1.7e-26 122.9 102 63.7
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 3.8e-26 121.7 115 56.5
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 5.0e-26 121.3 115 57.4
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 8.5e-26 120.6 118 55.1
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 1.5e-25 119.8 118 55.9
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 4.2e-25 118.2 103 60.2
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 7.2e-25 117.5 81 75.3
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 9.4e-25 117.1 123 55.3
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 1.2e-24 116.7 105 58.1
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 8.0e-24 114.0 118 53.4
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 1.0e-23 113.6 119 52.1
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 1.0e-23 113.6 103 55.3
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 8.8e-23 110.5 102 59.8
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 1.2e-22 110.2 118 52.5
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 1.5e-22 109.8 102 58.8
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 2.6e-22 109.0 99 58.6
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 3.3e-22 108.6 163 43.6
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 2.2e-21 105.9 100 56.0
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.7e-21 105.1 97 58.8
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 4.8e-21 104.8 83 67.5
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 8.3e-21 104.0 107 49.5
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 3.1e-20 102.1 102 56.9
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 3.1e-20 102.1 112 49.1
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 4.1e-20 101.7 88 62.5
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 5.3e-20 101.3 122 42.6
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 2.7e-19 99.0 111 49.5
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 1.9e-17 92.8 91 53.8
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 2.5e-17 92.4 62 71.0
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 7.2e-17 90.9 118 40.7
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 9.4e-17 90.5 165 38.2
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 9.4e-17 90.5 80 61.2
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.6e-16 89.7 95 49.5
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.3e-15 85.9 63 63.5
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 1.2e-14 83.6 99 45.5
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 1.2e-14 83.6 103 44.7
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 1.7e-13 79.7 81 49.4
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 6.3e-13 77.8 102 42.2
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.0e-10 70.5 58 62.1
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 2.3e-10 69.3 72 50.0
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 3.8e-10 68.6 109 35.8
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 5.0e-10 68.2 112 38.4
MD08G1245200 Malus domestica HOM05D006640 ORTHO05D008078 1.2e-08 63.5 39 84.6
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 1.4e-07 60.1 49 57.1
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 2.0e-06 56.2 45 60.0


User provided reference genes

Program Settings