Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001207g0040 Nicotiana tabacum HOM05D005987 ORTHO05D007233 4.4e-39 164.1 79 100.0
Nitab4.5_0003229g0030 Nicotiana tabacum HOM05D005987 ORTHO05D007233 9.9e-31 136.3 67 97.0
Solyc03g112640.3 Solanum lycopersicum HOM05D005987 ORTHO05D007233 7.1e-29 130.2 67 91.0
PGSC0003DMG400018166 Solanum tuberosum HOM05D005987 ORTHO05D007233 7.1e-29 130.2 67 91.0
CAN.G1166.26 Capsicum annuum HOM05D005987 ORTHO05D007233 1.6e-28 129.0 67 89.6
Sopen03g031720 Solanum pennellii HOM05D005987 ORTHO05D007233 4.6e-28 127.5 67 89.6
FAN18G2319 Fragaria x ananassa HOM05D005987 ORTHO05D007233 5.1e-27 124.0 71 76.1
Peaxi162Scf00089g01737 Petunia axillaris HOM05D005987 ORTHO05D007233 1.1e-26 122.9 67 89.6
FvH4_5g05710 Fragaria vesca HOM05D005987 ORTHO05D007233 1.9e-26 122.1 65 83.1
Glyma.05G039500 Glycine max HOM05D005987 ORTHO05D007233 3.3e-26 121.3 65 83.1
FAN04G3269 Fragaria x ananassa HOM05D005987 ORTHO05D007233 4.3e-26 120.9 71 74.6
FvH4_1g22320 Fragaria vesca HOM05D005987 ORTHO05D007233 7.3e-26 120.2 71 73.2
GSVIVG01007695001 Vitis vinifera HOM05D005987 ORTHO05D007233 7.3e-26 120.2 65 83.1
Ah.02g110630 Amaranthus hybridus HOM05D005987 ORTHO05D007233 1.2e-25 119.4 65 83.1
MSTRG.9684 Avicennia marina HOM05D005987 ORTHO05D007233 1.2e-25 119.4 65 81.5
Dinv20627 Davidia involucrata HOM05D005987 ORTHO05D007233 1.2e-25 119.4 65 81.5
Sc12g0005210 Simmondsia chinensis HOM05D005987 ORTHO05D007233 1.2e-25 119.4 65 81.5
SGA_v2.0_scaffold116G32224 Striga asiatica HOM05D005987 ORTHO05D007233 1.2e-25 119.4 67 80.6
TAR629G2107 Trochodendron aralioides HOM05D005987 ORTHO05D007233 1.2e-25 119.4 67 79.1
Glyma.17G087400 Glycine max HOM05D005987 ORTHO05D007233 1.6e-25 119.0 65 81.5
SGA_v2.0_scaffold90G27882 Striga asiatica HOM05D005987 ORTHO05D007233 2.1e-25 118.6 67 80.6
VMungo1215G1113 Vigna mungo HOM05D005987 ORTHO05D007233 2.1e-25 118.6 65 81.5
SalBow5G4086 Salvia bowleyana HOM05D005987 ORTHO05D007233 2.8e-25 118.2 66 78.8
FAN08G2261 Fragaria x ananassa HOM05D005987 ORTHO05D007233 3.6e-25 117.9 67 79.1
Nn4g22674 Nelumbo nucifera HOM05D005987 ORTHO05D007233 3.6e-25 117.9 68 80.9
Phvul.003G202500 Phaseolus vulgaris HOM05D002782 ORTHO05D007233 3.6e-25 117.9 65 81.5
Actinidia19114 Actinidia chinensis HOM05D005987 ORTHO05D007233 4.7e-25 117.5 65 80.0
Cc04_g12360 Coffea canephora HOM05D005987 ORTHO05D007233 4.7e-25 117.5 66 78.8
FAN13G1898 Fragaria x ananassa HOM05D005987 ORTHO05D007233 4.7e-25 117.5 65 80.0
Lsat_1_v5_gn_7_54241 Lactuca sativa HOM05D005987 ORTHO05D007233 4.7e-25 117.5 67 77.6
Prupe.5G170200 Prunus persica HOM05D005987 ORTHO05D007233 4.7e-25 117.5 65 78.5
HanXRQChr03g0068941 Helianthus annuus HOM05D005987 ORTHO05D007233 6.2e-25 117.1 65 80.0
MD14G1176400 Malus domestica HOM05D005987 ORTHO05D007233 6.2e-25 117.1 65 78.5
PGR083G1581 Punica granatum HOM05D005987 ORTHO05D007233 6.2e-25 117.1 65 78.5
TPR.G37573 Trifolium pratense HOM05D005987 ORTHO05D007233 6.2e-25 117.1 65 80.0
CiPaw.12G028700 Carya illinoinensis HOM05D005987 ORTHO05D007233 8.1e-25 116.7 65 80.0
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 8.1e-25 116.7 65 80.0
Gohir.A09G172600 Gossypium hirsutum HOM05D005987 ORTHO05D007233 1.1e-24 116.3 65 76.9
SalBow5G4110 Salvia bowleyana HOM05D005987 ORTHO05D007233 1.1e-24 116.3 64 79.7
arahy.Tifrunner.gnm1.ann1.2X5BV9 Arachis hypogaea HOM05D005987 ORTHO05D007233 1.4e-24 115.9 65 75.4
arahy.Tifrunner.gnm1.ann1.9L10M3 Arachis hypogaea HOM05D005987 ORTHO05D007233 1.4e-24 115.9 65 75.4
Ca_21942_v3 Cicer arietinum L. HOM05D005987 ORTHO05D007233 1.4e-24 115.9 67 76.1
MBI16_g14601_MAGBIO Magnolia biondii HOM05D005987 ORTHO05D007233 1.4e-24 115.9 67 79.1
Rhsim12G0166400 Rhododendron simsii HOM05D005987 ORTHO05D007233 1.4e-24 115.9 65 78.5
Hund09453 Selenicereus undatus HOM05D005987 ORTHO05D007233 1.4e-24 115.9 64 82.8
Cfa019170 Carpinus fangiana HOM05D005987 ORTHO05D007233 1.8e-24 115.5 65 81.5
MSTRG.4360 Avicennia marina HOM05D005987 ORTHO05D007233 2.4e-24 115.2 68 76.5
CDE06G0769 Ceratophyllum demersum HOM05D005987 ORTHO05D007233 2.4e-24 115.2 68 76.5
Medtr4g105460 Medicago truncatula HOM05D005987 ORTHO05D007233 2.4e-24 115.2 65 78.5
Oeu024705.1 Olea europaea HOM05D005987 ORTHO05D007233 2.4e-24 115.2 67 76.1
Sabra15G0104300 Salix brachista HOM05D005987 ORTHO05D007233 2.4e-24 115.2 66 75.8
Gorai.006G189900 Gossypium raimondii HOM05D005987 ORTHO05D007233 3.1e-24 114.8 65 75.4
PSO832G1443 Papaver somniferum HOM05D005987 ORTHO05D007233 3.1e-24 114.8 65 78.5
Aqoxy1G03751 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 4.0e-24 114.4 68 77.9
Aqoxy3G02835 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 4.0e-24 114.4 68 77.9
AUR62028761 Chenopodium quinoa HOM05D005987 ORTHO05D007233 4.0e-24 114.4 65 80.0
Os02g0321500 Oryza sativa ssp. japonica HOM05D005987 ORTHO05D007233 4.0e-24 114.4 70 74.3
Psat4g058800 Pisum sativum HOM05D005987 ORTHO05D007233 4.0e-24 114.4 65 78.5
Lj5A126G85 Lonicera japonica HOM05D005987 ORTHO05D007233 5.2e-24 114.0 65 76.9
MD06G1170600 Malus domestica HOM05D005987 ORTHO05D007233 5.2e-24 114.0 65 75.4
RcHm_v2.0_Chr7g0193121 Rosa chinensis HOM05D005987 ORTHO05D007233 5.2e-24 114.0 65 76.9
vmacro16628 Vaccinium macrocarpon HOM05D005987 ORTHO05D007233 5.2e-24 114.0 65 78.5
Zm00001eb379230 Zea mays HOM05D005987 ORTHO05D007233 5.2e-24 114.0 68 75.0
EL10Ac5g10704 Beta vulgaris HOM05D005987 ORTHO05D007233 6.9e-24 113.6 64 79.7
Potri.015G080100 Populus trichocarpa HOM05D005987 ORTHO05D007233 6.9e-24 113.6 66 72.7
Lj4g0021830 Lotus japonicus HOM05D005987 ORTHO05D007233 9.0e-24 113.2 67 76.1
Zm00001eb379250 Zea mays HOM05D005987 ORTHO05D007233 9.0e-24 113.2 68 75.0
Ah.11g051440 Amaranthus hybridus HOM05D005987 ORTHO05D007233 1.2e-23 112.8 65 76.9
Ciclev10021762m.g Citrus clementina HOM05D005987 ORTHO05D007233 1.2e-23 112.8 67 74.6
Gohir.D09G168300 Gossypium hirsutum HOM05D005987 ORTHO05D007233 1.2e-23 112.8 64 75.0
HanXRQChr13g0389901 Helianthus annuus HOM05D005987 ORTHO05D007233 2.0e-23 112.1 65 75.4
Aa31LG11G610 Aethionema arabicum HOM05D005987 ORTHO05D007233 2.6e-23 111.7 66 74.2
arahy.Tifrunner.gnm1.ann1.T968NY Arachis hypogaea HOM05D005987 ORTHO05D007233 2.6e-23 111.7 65 70.8
BcaB04g19948 Brassica carinata HOM05D005987 ORTHO05D007233 2.6e-23 111.7 67 71.6
Eucgr.B00245 Eucalyptus grandis HOM05D005987 ORTHO05D007233 2.6e-23 111.7 71 74.6
Lalb_Chr12g0201721 Lupinus albus HOM05D005987 ORTHO05D007233 2.6e-23 111.7 64 75.0
CSS0034112 Camellia sinensis var. sinensis HOM05D005987 ORTHO05D007233 3.4e-23 111.3 65 75.4
CARHR276860 Cardamine hirsuta HOM05D005987 ORTHO05D007233 3.4e-23 111.3 67 71.6
TAR371G0908 Trochodendron aralioides HOM05D005987 ORTHO05D007233 3.4e-23 111.3 67 74.6
BcaC04g23367 Brassica carinata HOM05D005987 ORTHO05D007233 5.8e-23 110.5 67 70.1
C09p09060 Brassica napus HOM05D005987 ORTHO05D007233 5.8e-23 110.5 67 70.1
BolC9t53819H Brassica oleracea HOM05D005987 ORTHO05D007233 5.8e-23 110.5 67 70.1
unitig_0.g1431 Utricularia gibba HOM05D005987 ORTHO05D007233 5.8e-23 110.5 64 70.3
A09p08010 Brassica napus HOM05D005987 ORTHO05D007233 7.6e-23 110.2 67 70.1
BraA09t36453Z Brassica rapa HOM05D005987 ORTHO05D007233 7.6e-23 110.2 67 70.1
PSO782G2758 Papaver somniferum HOM05D005987 ORTHO05D007233 7.6e-23 110.2 65 75.4
Psat4g058760 Pisum sativum HOM05D005987 ORTHO05D007233 7.6e-23 110.2 70 71.4
AL8G40080 Arabidopsis lyrata HOM05D005987 ORTHO05D007233 9.9e-23 109.8 67 70.1
AT5G63060 Arabidopsis thaliana HOM05D005987 ORTHO05D007233 9.9e-23 109.8 67 70.1
Carub.0008s2377 Capsella rubella HOM05D005987 ORTHO05D007233 9.9e-23 109.8 67 70.1
SMO270G0062 Selaginella moellendorffii HOM05D005987 ORTHO05D007233 9.9e-23 109.8 70 71.4
Migut.D01982 Erythranthe guttata HOM05D005987 ORTHO05D007233 2.2e-22 108.6 65 69.2
TWI39G0642 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 2.2e-22 108.6 67 74.6
MELO3C026282.2 Cucumis melo HOM05D005987 ORTHO05D007233 2.9e-22 108.2 65 72.3
HPP92_000317 Vanilla planifolia HOM05D005987 ORTHO05D007233 2.9e-22 108.2 70 70.0
Sed0001492 Sechium edule HOM05D005987 ORTHO05D007233 3.8e-22 107.8 65 72.3
THA.LOC104798969 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 3.8e-22 107.8 67 70.1
TPR.G37495 Trifolium pratense HOM05D005987 ORTHO05D007233 3.8e-22 107.8 65 73.8
TWI14G0473 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 3.8e-22 107.8 67 70.1
ClCG06G017140 Citrullus lanatus HOM05D005987 ORTHO05D007233 4.9e-22 107.5 65 70.8
Thhalv10004783m.g Eutrema salsugineum HOM05D005987 ORTHO05D007233 4.9e-22 107.5 64 70.3
CsaV3_1G001340 Cucumis sativus L. HOM05D005987 ORTHO05D007233 6.4e-22 107.1 65 70.8
THA.LOC104821480 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 8.4e-22 106.7 67 70.1
Sp2g26190 Schrenkiella parvula HOM05D005987 ORTHO05D007233 1.1e-21 106.3 67 67.2
Sed0002182 Sechium edule HOM05D005987 ORTHO05D007233 1.4e-21 105.9 65 73.8
Oeu016421.1 Olea europaea HOM05D005987 ORTHO05D007233 1.2e-20 102.8 66 69.7
Dinv38561 Davidia involucrata HOM05D005987 ORTHO05D007233 7.8e-20 100.1 56 80.4
AagrBONN_evm.TU.Sc2ySwM_117.1082 Anthoceros agrestis HOM05D005987 ORTHO05D007233 1.7e-19 99.0 63 66.7
Pp3c16_21460 Physcomitrium patens HOM05D005987 ORTHO05D007233 1.1e-18 96.3 70 58.6
Medtr4g105450 Medicago truncatula HOM05D005987 ORTHO05D007233 1.5e-18 95.9 65 64.6
CBR_g39624 Chara braunii HOM05D005987 ORTHO05D007233 2.5e-18 95.1 63 63.5
SEGI_07831 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 2.5e-18 95.1 68 64.7
SEGI_41325 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 2.5e-18 95.1 68 64.7
Nitab4.5_0001207g0020 Nicotiana tabacum HOM05D001815 ORTHO05D007233 6.9e-16 87.0 42 95.2
Cre10.g448051 Chlamydomonas reinhardtii HOM05D005987 ORTHO05D007233 2.6e-15 85.1 64 53.1
DCAR_016038 Daucus carota HOM05D005987 ORTHO05D007233 2.6e-15 85.1 45 84.4
Mapoly0098s0038 Marchantia polymorpha HOM05D005987 ORTHO05D007233 2.2e-14 82.0 66 56.1
AUR62008180 Chenopodium quinoa HOM05D005987 ORTHO05D007233 1.9e-13 79.0 46 76.1
ATR1152G043 Amborella trichopoda HOM05D005987 ORTHO05D007233 2.4e-13 78.6 44 77.3
QL10p008901 Quercus lobata HOM05D005987 ORTHO05D007233 2.1e-12 75.5 42 76.2
Atru.chr9.2528 Acer truncatum HOM05D005987 ORTHO05D007233 6.0e-12 73.9 41 80.5
PRCOL_00004470 Prasinoderma coloniale HOM05D005987 ORTHO05D007233 9.6e-10 66.6 63 47.6
MCO02G152 Micromonas commoda HOM05D005987 ORTHO05D007233 5.3e-08 60.8 53 45.3
Manes.14G063300 Manihot esculenta HOM05D005987 ORTHO05D007233 7.6e-07 57.0 65 47.7


User provided reference genes

Program Settings