Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001205g0060 Nicotiana tabacum HOM05D005303 ORTHO05D006331 4.8e-83 311.2 170 100.0
Nitab4.5_0004080g0010 Nicotiana tabacum HOM05D005303 ORTHO05D006331 2.7e-49 199.1 188 66.5
Nitab4.5_0000367g0060 Nicotiana tabacum HOM05D005303 ORTHO05D006331 2.8e-46 189.1 188 64.4
Sopen05g010820 Solanum pennellii HOM05D005303 ORTHO05D006331 4.3e-31 138.7 191 50.8
PGSC0003DMG400034309 Solanum tuberosum HOM05D005303 ORTHO05D006331 6.8e-29 131.3 191 51.3
Solyc05g015490.4 Solanum lycopersicum HOM05D005303 ORTHO05D006331 1.2e-28 130.6 183 47.0
Peaxi162Scf00518g00317 Petunia axillaris HOM05D005303 ORTHO05D006331 2.5e-23 112.8 193 44.6
Peaxi162Scf00128g01330 Petunia axillaris HOM05D005303 ORTHO05D006331 1.4e-21 107.1 141 47.5
CAN.G789.2 Capsicum annuum HOM05D005303 ORTHO05D006331 1.8e-13 80.1 115 45.2
Lalb_Chr08g0230611 Lupinus albus HOM05D005303 ORTHO05D006331 6.4e-11 71.6 134 38.1
Oeu056662.1 Olea europaea HOM05D005303 ORTHO05D006331 1.1e-10 70.9 163 31.3
Cc11_g16970 Coffea canephora HOM05D005303 ORTHO05D006331 5.4e-10 68.6 173 37.6
TAR622G0367 Trochodendron aralioides HOM05D005303 ORTHO05D006331 9.3e-10 67.8 134 35.1
Rhsim12G0025400 Rhododendron simsii HOM05D005303 ORTHO05D006331 1.2e-09 67.4 113 49.6
SalBow2G1154 Salvia bowleyana HOM05D005303 ORTHO05D006331 1.2e-09 67.4 139 35.3
Dinv10951 Davidia involucrata HOM05D005303 ORTHO05D006331 1.6e-09 67.0 174 32.8
Actinidia09647 Actinidia chinensis HOM05D005303 ORTHO05D006331 3.5e-09 65.9 159 37.7
Lalb_Chr23g0278121 Lupinus albus HOM05D005303 ORTHO05D006331 4.6e-09 65.5 182 31.9
vmacro01058 Vaccinium macrocarpon HOM05D005303 ORTHO05D006331 4.6e-09 65.5 118 39.0
Glyma.11G251100 Glycine max HOM05D005303 ORTHO05D006331 6.0e-09 65.1 173 37.0
SGA_v2.0_scaffold9G04789 Striga asiatica HOM05D005303 ORTHO05D006331 6.0e-09 65.1 190 28.4
Migut.K00948 Erythranthe guttata HOM05D005303 ORTHO05D006331 1.3e-08 63.9 165 29.1
Glyma.18G005800 Glycine max HOM05D005303 ORTHO05D006331 1.3e-08 63.9 180 37.8
CSS0035674 Camellia sinensis var. sinensis HOM05D005303 ORTHO05D006331 2.3e-08 63.2 121 36.4
SalBow1G0734 Salvia bowleyana HOM05D005303 ORTHO05D006331 2.3e-08 63.2 139 33.8
Aqoxy3G01556 Aquilegia oxysepala HOM05D005303 ORTHO05D006331 5.1e-08 62.0 150 34.7
Hma1.2p1_0275F.1_g110730 Hydrangea macrophylla HOM05D005303 ORTHO05D006331 5.1e-08 62.0 128 33.6
arahy.Tifrunner.gnm1.ann1.VE5Y7D Arachis hypogaea HOM05D005303 ORTHO05D006331 8.7e-08 61.2 135 30.4
TPR.G17777 Trifolium pratense HOM05D005303 ORTHO05D006331 1.5e-07 60.5 123 37.4
Medtr3g085210 Medicago truncatula HOM05D005303 ORTHO05D006331 1.9e-07 60.1 120 35.8
Nn4g22303 Nelumbo nucifera HOM05D005303 ORTHO05D006331 1.9e-07 60.1 162 38.9
BcaC01g00001 Brassica carinata HOM05D005303 ORTHO05D006331 2.5e-07 59.7 119 30.3
C03p74660 Brassica napus HOM05D005303 ORTHO05D006331 2.5e-07 59.7 119 30.3
BolC3t19714H Brassica oleracea HOM05D005303 ORTHO05D006331 2.5e-07 59.7 119 30.3
Eucgr.B03498 Eucalyptus grandis HOM05D005303 ORTHO05D006331 2.5e-07 59.7 88 37.5
Gohir.A04G140000 Gossypium hirsutum HOM05D005303 ORTHO05D006331 3.3e-07 59.3 182 30.8
Hma1.2p1_0065F.1_g035400 Hydrangea macrophylla HOM05D005303 ORTHO05D006331 3.3e-07 59.3 173 28.3
Potri.003G172400 Populus trichocarpa HOM05D005303 ORTHO05D006331 3.3e-07 59.3 175 29.7
HPP92_013607 Vanilla planifolia HOM05D005303 ORTHO05D006331 3.3e-07 59.3 171 29.8
Psat2g038040 Pisum sativum HOM05D005303 ORTHO05D006331 4.3e-07 58.9 82 41.5
TWI36G0341 Tripterygium wilfordii HOM05D005303 ORTHO05D006331 4.3e-07 58.9 114 33.3
PSO017G5567 Papaver somniferum HOM05D005303 ORTHO05D006331 5.6e-07 58.5 79 41.8
PSO478G1699 Papaver somniferum HOM05D005303 ORTHO05D006331 5.6e-07 58.5 79 41.8
Lj3g0001386 Lotus japonicus HOM05D005303 ORTHO05D006331 7.4e-07 58.2 156 32.1
AL1G41440 Arabidopsis lyrata HOM05D005303 ORTHO05D006331 9.6e-07 57.8 157 28.0
AT1G27950 Arabidopsis thaliana HOM05D005303 ORTHO05D006331 9.6e-07 57.8 157 29.3
CARHR027380 Cardamine hirsuta HOM05D005303 ORTHO05D006331 9.6e-07 57.8 160 35.0
Haze_12425 Corylus avellana HOM05D005303 ORTHO05D006331 9.6e-07 57.8 80 38.8
Lsat_1_v5_gn_8_148461 Lactuca sativa HOM05D005303 ORTHO05D006331 9.6e-07 57.8 130 28.5
Ca_16454_v3 Cicer arietinum L. HOM05D005303 ORTHO05D006331 1.3e-06 57.4 131 32.8
CANSAT01G0641 Cannabis sativa HOM05D005303 ORTHO05D006331 1.6e-06 57.0 85 36.5
Gohir.D04G183200 Gossypium hirsutum HOM05D005303 ORTHO05D006331 1.6e-06 57.0 182 32.4
Atru.chr11.2331 Acer truncatum HOM05D005303 ORTHO05D006331 2.1e-06 56.6 106 34.0
Carub.0001s2640 Capsella rubella HOM05D005303 ORTHO05D006331 2.1e-06 56.6 157 27.4
BcaC06g35324 Brassica carinata HOM05D005303 ORTHO05D006331 2.8e-06 56.2 85 38.8
C07p17420 Brassica napus HOM05D005303 ORTHO05D006331 2.8e-06 56.2 85 38.8
HanXRQChr08g0207871 Helianthus annuus HOM05D005303 ORTHO05D006331 2.8e-06 56.2 129 28.7
Manes.13G011400 Manihot esculenta HOM05D005303 ORTHO05D006331 2.8e-06 56.2 129 31.0
HanXRQChr12g0385451 Helianthus annuus HOM05D005303 ORTHO05D006331 3.7e-06 55.8 130 29.2
A08p25990 Brassica napus HOM05D005303 ORTHO05D006331 4.8e-06 55.5 119 35.3
BraA08t34550Z Brassica rapa HOM05D005303 ORTHO05D006331 4.8e-06 55.5 119 35.3
DCAR_007003 Daucus carota HOM05D005303 ORTHO05D006331 4.8e-06 55.5 122 29.5
Oeu006525.1 Olea europaea HOM05D000396 ORTHO05D000116 4.8e-06 55.5 109 33.0
Potri.001G056200 Populus trichocarpa HOM05D005303 ORTHO05D006331 4.8e-06 55.5 135 28.9
QL03p052523 Quercus lobata HOM05D005303 ORTHO05D006331 4.8e-06 55.5 164 35.4
ECA233G0518 Erigeron canadensis HOM05D005303 ORTHO05D006331 6.2e-06 55.1 129 26.4
PSO017G5389 Papaver somniferum HOM05D005303 ORTHO05D006331 6.2e-06 55.1 132 42.4
PSO478G2319 Papaver somniferum HOM05D005303 ORTHO05D006331 6.2e-06 55.1 127 32.3
BolC7t42247H Brassica oleracea HOM05D005303 ORTHO05D006331 8.1e-06 54.7 85 37.6
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 8.1e-06 54.7 180 27.8


User provided reference genes

Program Settings