Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.8e-256 888.6 421 100.0
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 8.4e-254 879.8 421 98.6
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 7.9e-244 846.7 419 93.3
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 1.3e-243 845.9 419 93.8
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 9.0e-240 833.2 420 93.8
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 1.0e-235 819.7 461 85.5
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 1.0e-235 819.7 506 78.9
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 5.0e-222 774.2 421 85.3
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 2.3e-219 765.4 421 83.1
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 8.8e-219 763.5 420 84.5
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 1.5e-218 762.7 418 82.8
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 4.4e-218 761.1 421 83.1
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 7.4e-218 760.4 418 84.2
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 9.7e-218 760.0 419 83.8
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 3.7e-217 758.1 419 84.5
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 4.1e-216 754.6 418 83.3
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 7.0e-216 753.8 419 83.1
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 2.0e-215 752.3 421 83.1
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 7.7e-215 750.4 418 81.8
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 1.7e-214 749.2 413 83.8
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 2.2e-214 748.8 419 81.4
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 3.8e-214 748.0 419 82.8
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 5.0e-214 747.7 419 82.1
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 6.5e-214 747.3 418 82.5
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 8.5e-214 746.9 419 82.1
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 1.9e-213 745.7 417 81.3
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 3.2e-213 745.0 417 82.3
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 9.4e-213 743.4 418 81.3
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 1.6e-212 742.7 421 81.0
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 4.7e-212 741.1 421 81.5
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 6.1e-212 740.7 418 81.1
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 6.1e-212 740.7 419 81.6
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 6.1e-212 740.7 418 81.1
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 1.0e-211 740.0 419 81.1
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 1.0e-211 740.0 417 81.5
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 1.2e-210 736.5 419 80.7
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 4.4e-210 734.6 420 81.4
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 1.3e-209 733.0 418 78.7
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 2.8e-209 731.9 419 80.4
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 2.8e-209 731.9 446 76.7
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 2.8e-209 731.9 446 76.7
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 4.8e-209 731.1 419 80.2
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 4.8e-209 731.1 418 80.6
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 6.3e-209 730.7 418 78.5
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 4.1e-208 728.0 417 79.1
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 5.3e-208 727.6 417 80.8
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 7.0e-208 727.2 418 78.7
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 7.0e-208 727.2 418 80.6
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 2.7e-207 725.3 400 83.2
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 5.9e-207 724.2 417 78.7
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 1.0e-206 723.4 418 79.9
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.3e-206 723.0 418 78.7
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 1.3e-206 723.0 417 79.4
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 2.2e-206 722.2 417 78.7
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 2.2e-206 722.2 417 79.6
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 2.9e-206 721.8 419 78.5
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 8.5e-206 720.3 417 78.9
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 2.5e-205 718.8 418 78.0
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 2.5e-205 718.8 424 80.0
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 4.2e-205 718.0 417 77.7
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 7.2e-205 717.2 454 74.4
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 7.2e-205 717.2 417 77.5
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 1.2e-204 716.5 417 77.7
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 2.7e-204 715.3 420 79.0
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 3.6e-204 714.9 417 78.2
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 6.1e-204 714.1 417 79.4
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 8.0e-204 713.8 417 78.9
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.4e-203 713.0 417 78.7
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 1.4e-203 713.0 416 78.4
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 2.3e-203 712.2 417 77.2
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 4.0e-203 711.4 417 77.5
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.0e-203 711.4 417 78.7
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 5.2e-203 711.1 422 78.4
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 5.2e-203 711.1 419 79.0
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 6.8e-203 710.7 417 77.7
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 6.8e-203 710.7 415 79.3
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 8.8e-203 710.3 416 76.4
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 8.8e-203 710.3 419 78.8
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 1.2e-202 709.9 417 78.2
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 1.2e-202 709.9 417 77.5
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 2.0e-202 709.1 416 77.4
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 3.4e-202 708.4 417 78.7
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 9.8e-202 706.8 421 77.4
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 1.7e-201 706.1 421 77.2
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.3e-201 704.1 417 78.2
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 8.3e-201 703.7 417 78.2
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 1.1e-200 703.4 429 77.2
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 1.4e-200 703.0 395 81.3
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 9.1e-200 700.3 397 82.1
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 2.7e-199 698.7 458 72.5
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 4.5e-199 698.0 420 77.9
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 5.9e-199 697.6 397 81.4
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 2.9e-198 695.3 412 78.4
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 7.2e-197 690.6 404 78.2
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 9.5e-197 690.3 403 77.9
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 1.6e-196 689.5 404 78.0
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 4.7e-196 688.0 403 77.7
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 1.7e-193 679.5 419 75.9
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 4.9e-193 677.9 425 73.2
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 6.3e-193 677.6 426 73.2
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 1.1e-192 676.8 432 75.2
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 2.9e-190 668.7 384 79.7
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 8.6e-190 667.2 428 73.8
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 1.5e-189 666.4 456 71.3
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 1.8e-187 659.4 420 70.2
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 4.0e-187 658.3 419 69.9
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 6.4e-185 651.0 418 74.2
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 3.3e-181 638.6 401 74.8
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 3.6e-180 635.2 415 73.7
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 2.8e-164 582.4 419 67.3
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 4.7e-164 581.6 419 66.3
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 3.8e-161 572.0 416 62.5
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 8.4e-161 570.9 371 74.1
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 2.1e-159 566.2 417 64.0
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 1.0e-158 563.9 419 65.9
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 3.0e-158 562.4 358 70.1
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 2.5e-157 559.3 300 83.3
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 1.2e-154 550.4 421 62.0
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 1.2e-154 550.4 438 64.6
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 7.1e-144 514.6 359 67.1
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 5.1e-142 508.4 421 56.5
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 1.2e-135 487.3 274 82.1
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 5.6e-133 478.4 466 55.2
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 9.6e-133 477.6 465 55.3
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 2.2e-124 449.9 468 49.6
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 9.3e-120 434.5 470 48.5
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 5.1e-110 402.1 422 50.7
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 2.8e-47 193.7 115 74.8
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 1.9e-32 144.4 104 64.4
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 4.8e-31 139.8 93 71.0
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 1.8e-30 137.9 89 68.5
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 1.8e-30 137.9 89 68.5
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.9e-30 136.0 115 57.4
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.2e-19 100.5 55 80.0
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 4.2e-19 100.1 69 63.8
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 1.2e-18 98.6 136 41.9
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 1.6e-18 98.2 67 65.7
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 2.7e-18 97.4 67 64.2
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 1.1e-16 92.0 65 63.1
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.7e-09 66.2 65 50.8
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 4.8e-07 60.1 25 100.0
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 1.8e-06 58.2 36 66.7
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 6.9e-06 56.2 121 30.6
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 9.0e-06 55.8 121 33.1


User provided reference genes

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