Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001187g0060 Nicotiana tabacum HOM05D006716 ORTHO05D008396 4.4e-43 177.6 90 100.0
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 9.5e-22 106.7 73 67.1
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 9.5e-22 106.7 73 67.1
Solyc02g082600.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 1.2e-21 106.3 74 64.9
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 2.4e-20 102.1 73 67.1
Sopen02g027300 Solanum pennellii HOM05D006716 ORTHO05D008396 6.8e-20 100.5 74 63.5
Nitab4.5_0007530g0050 Nicotiana tabacum HOM05D006716 ORTHO05D008396 1.2e-19 99.8 73 67.1
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 2.0e-19 99.0 73 65.8
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 3.4e-19 98.2 84 60.7
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 3.2e-17 91.7 72 62.5
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 5.4e-17 90.9 75 62.7
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 5.4e-17 90.9 74 58.1
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 9.2e-17 90.1 66 65.2
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 1.6e-16 89.4 74 62.2
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 6.0e-16 87.4 68 64.7
CAN.G497.69 Capsicum annuum HOM05D003495 ORTHO05D004159 1.3e-15 86.3 66 62.1
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 1.9e-14 82.4 68 58.8
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 7.3e-14 80.5 62 61.3
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 2.1e-13 79.0 64 54.7
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 3.6e-13 78.2 72 56.9
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 6.9e-12 73.9 74 51.4
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.0e-11 72.4 83 44.6
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.0e-11 72.4 83 44.6
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 1.7e-10 69.3 74 52.7
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 2.2e-10 68.9 74 45.9
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 2.9e-10 68.6 77 44.2
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 3.8e-10 68.2 74 50.0
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 1.1e-09 66.6 75 52.0
DCAR_001167 Daucus carota HOM05D006716 ORTHO05D008396 1.4e-09 66.2 75 48.0
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 2.4e-09 65.5 75 50.7
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 5.4e-09 64.3 77 49.4
vmacro15745 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 7.1e-09 63.9 73 50.7
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 2.7e-08 62.0 72 44.4
vmacro15748 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.7e-08 62.0 77 44.2
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 3.5e-08 61.6 74 44.6
Ah.10g035330 Amaranthus hybridus HOM05D006716 ORTHO05D008396 7.8e-08 60.5 73 49.3
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.3e-07 59.7 75 44.0
Lj6A58T50 Lonicera japonica HOM05D006716 ORTHO05D008396 1.7e-07 59.3 69 49.3
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 5.1e-07 57.8 70 45.7
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.1e-06 56.6 70 45.7
Carub.0006s2493 Capsella rubella HOM05D005214 ORTHO05D005861 1.5e-06 56.2 69 43.5
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.5e-06 56.2 68 39.7
DCAR_022150 Daucus carota HOM05D005214 ORTHO05D005861 1.9e-06 55.8 69 40.6
Manes.08G119000 Manihot esculenta HOM05D005214 ORTHO05D005861 2.5e-06 55.5 69 42.0
Potri.013G018300 Populus trichocarpa HOM05D005214 ORTHO05D005861 2.5e-06 55.5 69 40.6
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 2.5e-06 55.5 76 42.1
Gohir.D08G226000 Gossypium hirsutum HOM05D005214 ORTHO05D005861 4.3e-06 54.7 69 40.6
BcaNung04541 Brassica carinata HOM05D005214 ORTHO05D005861 5.6e-06 54.3 69 40.6
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.6e-06 54.3 74 40.5
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.6e-06 54.3 75 40.0
Sabra13G0021100 Salix brachista HOM05D005214 ORTHO05D005861 5.6e-06 54.3 69 39.1
Thhalv10004245m.g Eutrema salsugineum HOM05D005214 ORTHO05D005861 7.3e-06 53.9 69 40.6
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 7.3e-06 53.9 74 39.2
AL6G39370 Arabidopsis lyrata HOM05D005214 ORTHO05D005861 9.6e-06 53.5 69 39.1
AT5G27660 Arabidopsis thaliana HOM05D005214 ORTHO05D005861 9.6e-06 53.5 69 40.6


User provided reference genes

Program Settings