Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 0.0e+00 4490.3 2652 100.0
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 0.0e+00 3610.1 2744 82.9
Sopen04g027650 Solanum pennellii HOM05D011323 ORTHO05D010674 0.0e+00 1611.3 2927 41.9
Solyc04g071660.3 Solanum lycopersicum HOM05D011323 ORTHO05D010674 0.0e+00 1609.3 2956 42.1
PGSC0003DMG400006365 Solanum tuberosum HOM05D011323 ORTHO05D010674 0.0e+00 1521.5 2817 41.9
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 6.3e-214 750.0 2887 32.8
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 1.9e-24 120.6 369 35.5
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 5.5e-24 119.0 408 32.6
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 2.2e-20 107.1 411 30.9
Migut.C00977 Erythranthe guttata HOM05D027784 ORTHO05D010674 9.0e-19 101.7 360 34.4
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 1.7e-17 97.4 208 36.1
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 2.2e-17 97.1 266 32.3
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 3.8e-17 96.3 87 54.0
AL2G36890 Arabidopsis lyrata HOM05D010491 ORTHO05D012559 7.2e-16 92.0 115 43.5
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 1.6e-15 90.9 388 28.4
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 2.1e-15 90.5 387 28.4
ECA247G3667 Erigeron canadensis HOM05D011323 ORTHO05D010674 2.7e-15 90.1 408 29.9
Nn1g06053 Nelumbo nucifera HOM05D011323 ORTHO05D010674 4.6e-15 89.4 220 35.5
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 1.4e-14 87.8 139 42.4
Duzib116G0432 Durio zibethinus HOM05D013130 ORTHO05D022454 1.4e-14 87.8 386 28.5
Thecc.08G155200 Theobroma cacao HOM05D013130 ORTHO05D022454 1.8e-14 87.4 410 29.5
SGA_v2.0_scaffold108G30881 Striga asiatica HOM05D001241 ORTHO05D010674 2.3e-14 87.0 150 43.3
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 3.0e-14 86.7 581 26.0
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 3.0e-14 86.7 88 52.3
HanXRQChr11g0343441 Helianthus annuus HOM05D011323 ORTHO05D010674 3.9e-14 86.3 205 33.2
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 5.1e-14 85.9 114 45.6
Lj7A375T60 Lonicera japonica HOM05D011323 ORTHO05D010674 4.3e-13 82.8 263 33.1
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 9.7e-13 81.6 103 50.5
CiPaw.16G010100 Carya illinoinensis HOM05D015223 ORTHO05D010674 1.3e-12 81.3 386 28.5
RcHm_v2.0_Chr6g0274911 Rosa chinensis HOM05D012764 ORTHO05D017940 1.7e-12 80.9 180 36.1
Lsat_1_v5_gn_1_4921 Lactuca sativa HOM05D011323 ORTHO05D010674 2.2e-12 80.5 184 39.1
THA.LOC104812032 Tarenaya hassleriana HOM05D010491 ORTHO05D010674 8.2e-12 78.6 139 40.3
C06p50950 Brassica napus HOM05D010491 ORTHO05D012559 3.1e-11 76.6 311 29.6
SalBow7G1875 Salvia bowleyana HOM05D027784 ORTHO05D010674 5.3e-11 75.9 376 29.0
Thhalv10018017m.g Eutrema salsugineum HOM05D010491 ORTHO05D012559 6.9e-11 75.5 214 31.8
Prupe.8G035200 Prunus persica HOM05D012764 ORTHO05D017940 6.9e-11 75.5 415 28.4
AT1G76740 Arabidopsis thaliana HOM05D010491 ORTHO05D012559 3.4e-10 73.2 422 25.1
Cfa018307 Carpinus fangiana HOM05D015223 ORTHO05D010674 5.9e-10 72.4 642 23.4
RcHm_v2.0_Chr6g0274831 Rosa chinensis HOM05D012764 ORTHO05D010674 1.3e-09 71.2 152 33.6
Manes.02G181350 Manihot esculenta HOM05D015223 ORTHO05D010674 1.7e-09 70.9 375 26.9
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 2.2e-09 70.5 273 30.0
Haze_17782 Corylus avellana HOM05D015223 ORTHO05D010674 2.9e-09 70.1 629 22.1
CARHR070280 Cardamine hirsuta HOM05D010491 ORTHO05D012559 3.8e-09 69.7 347 27.1
FAN15G3692 Fragaria x ananassa HOM05D012764 ORTHO05D017940 3.8e-09 69.7 159 38.4
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 5.0e-09 69.3 384 26.3
COL.COLO4_29877 Corchorus olitorius HOM05D013130 ORTHO05D022454 6.5e-09 68.9 329 28.3
FAN20G3084 Fragaria x ananassa HOM05D012764 ORTHO05D017940 6.5e-09 68.9 157 37.6
Potri.002G066450 Populus trichocarpa HOM05D015223 ORTHO05D037420 6.5e-09 68.9 615 25.9
FAN24G0895 Fragaria x ananassa HOM05D012764 ORTHO05D010674 8.5e-09 68.6 153 33.3
A07p42390 Brassica napus HOM05D010491 ORTHO05D012559 1.1e-08 68.2 363 26.7
FvH4_2g13350 Fragaria vesca HOM05D012764 ORTHO05D010674 1.1e-08 68.2 153 33.3
BraA07t31765Z Brassica rapa HOM05D010491 ORTHO05D012559 1.4e-08 67.8 285 30.5
FvH4_2g13370 Fragaria vesca HOM05D012764 ORTHO05D017940 4.2e-08 66.2 208 32.2
Sp5g31880 Schrenkiella parvula HOM05D010491 ORTHO05D012559 7.2e-08 65.5 312 26.3
TAR628G0624 Trochodendron aralioides HOM05D013130 ORTHO05D010674 7.2e-08 65.5 395 28.1
arahy.Tifrunner.gnm1.ann1.R835TB Arachis hypogaea HOM05D053442 ORTHO05D010674 6.1e-07 62.4 43 65.1
arahy.Tifrunner.gnm1.ann1.UU4M73 Arachis hypogaea HOM05D053442 ORTHO05D010674 1.4e-06 61.2 82 43.9
A07p28380 Brassica napus HOM05D010491 ORTHO05D012559 1.4e-06 61.2 93 37.6
BraA07t30474Z Brassica rapa HOM05D010491 ORTHO05D012559 1.4e-06 61.2 93 37.6
FAN27G3106 Fragaria x ananassa HOM05D012764 ORTHO05D017940 1.4e-06 61.2 231 33.3
BcaB02g07074 Brassica carinata HOM05D010491 ORTHO05D012559 2.3e-06 60.5 79 44.3
BolC6t40120H Brassica oleracea HOM05D010491 ORTHO05D012559 3.0e-06 60.1 728 24.0
MD05G1029500 Malus domestica HOM05D012764 ORTHO05D017940 3.0e-06 60.1 392 25.3
Sabra02G0052900 Salix brachista HOM05D015223 ORTHO05D037420 3.0e-06 60.1 386 27.5
Carub.0002s2365 Capsella rubella HOM05D010491 ORTHO05D012559 3.9e-06 59.7 35 74.3
BolC6t38310H Brassica oleracea HOM05D010491 ORTHO05D012559 6.7e-06 58.9 95 37.9
Cc10_g15020 Coffea canephora HOM05D011323 ORTHO05D010674 6.7e-06 58.9 110 40.0
VMungo0464G2099 Vigna mungo HOM05D028233 ORTHO05D012559 6.7e-06 58.9 38 71.1
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 8.8e-06 58.5 91 37.4
Dinv42169 Davidia involucrata HOM05D023276 ORTHO05D026395 8.8e-06 58.5 39 71.8


User provided reference genes

Program Settings