Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001177g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.3e-57 225.3 110 100.0
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-27 126.7 169 47.9
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-25 120.2 220 37.7
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.5e-24 115.5 74 81.1
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-23 112.8 201 38.8
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.2e-22 107.8 76 76.3
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-17 92.8 165 37.6
Nitab4.5_0001425g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-16 90.1 74 66.2
Nitab4.5_0002534g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.3e-16 88.6 70 71.4
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.6e-16 87.8 86 53.5
Nitab4.5_0013466g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.6e-13 79.0 86 55.8
Nitab4.5_0020511g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-13 78.6 58 70.7
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.4e-11 71.2 174 32.2
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.7e-10 68.9 152 31.6
Nitab4.5_0000098g0180 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-10 68.2 28 96.4
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.0e-10 67.8 28 92.9
Nitab4.5_0000864g0190 Nicotiana tabacum HOM05D025895 ORTHO05D000137 7.8e-10 67.4 67 61.2
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-09 66.6 28 92.9
Nitab4.5_0000403g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-09 65.9 28 89.3
Nitab4.5_0005641g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.9e-09 65.1 28 92.9
Nitab4.5_0000074g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.7e-09 63.9 29 86.2
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-08 63.5 56 58.9
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.5e-08 63.2 28 92.9
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.9e-08 62.8 28 89.3
Nitab4.5_0003350g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.5e-08 62.4 28 85.7
Nitab4.5_0002052g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.3e-08 62.0 28 85.7
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.6e-08 61.2 28 85.7
Nitab4.5_0024778g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.3e-08 60.8 27 85.2
Nitab4.5_0002908g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-07 60.1 76 52.6
Nitab4.5_0014959g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.6e-07 59.7 28 82.1
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.8e-07 58.9 28 85.7
Nitab4.5_0000391g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.1e-07 57.4 32 81.2
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-06 56.6 34 79.4
Nitab4.5_0017747g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-06 56.6 34 79.4
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-06 56.2 34 79.4
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-06 55.8 34 79.4
Nitab4.5_0003069g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-06 55.8 34 82.4
Nitab4.5_0005273g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-06 55.5 117 32.5
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-06 55.5 28 78.6
Nitab4.5_0001259g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.0e-06 55.1 31 80.6
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.0e-06 55.1 34 79.4
Nitab4.5_0003994g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.0e-06 55.1 34 76.5
Nitab4.5_0003350g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.9e-06 54.3 37 70.3
Nitab4.5_0011275g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.9e-06 54.3 34 76.5
Nitab4.5_0024778g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.9e-06 54.3 34 76.5
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.0e-06 53.9 34 76.5


User provided reference genes

Program Settings