Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.3e-292 1007.3 521 100.0
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.2e-244 849.7 520 87.5
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 7.8e-217 757.3 487 82.5
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 4.1e-210 734.9 503 79.7
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 3.0e-208 728.8 500 79.2
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.5e-207 726.5 500 79.0
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 4.7e-206 721.5 503 78.1
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 2.4e-205 719.2 504 77.8
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 2.4e-205 719.2 496 76.2
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.3e-199 698.7 506 74.1
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 4.0e-197 691.8 506 73.1
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.3e-197 691.4 491 74.7
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.4e-194 681.4 483 75.4
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.3e-194 680.6 479 75.4
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.4e-186 656.8 492 70.9
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 5.1e-176 621.7 507 67.5
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.7e-171 606.7 504 65.5
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 8.4e-171 604.4 504 65.3
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.7e-169 599.4 476 68.7
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-168 597.4 495 65.7
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 5.1e-168 595.1 494 65.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.7e-167 590.9 478 66.9
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 9.4e-162 574.3 497 63.8
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.7e-161 572.8 479 64.7
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 5.1e-160 568.5 397 73.3
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 1.5e-159 567.0 421 72.2
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 4.3e-159 565.5 421 72.2
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.8e-158 562.0 491 63.7
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.4e-157 560.5 467 65.1
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.1e-157 559.3 500 62.6
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.3e-157 558.5 445 67.6
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 5.9e-156 555.1 430 69.1
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.3e-155 553.9 438 68.7
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.3e-155 553.9 438 68.5
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.3e-155 553.9 395 72.7
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 3.8e-155 552.4 501 62.1
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.9e-154 550.1 395 72.2
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.7e-153 546.2 394 72.6
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 6.1e-153 545.0 395 72.4
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 7.9e-153 544.7 399 71.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.4e-152 543.9 394 72.1
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 2.3e-152 543.1 467 63.8
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.9e-152 542.3 459 64.5
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.9e-152 542.3 532 57.7
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.5e-151 540.4 497 61.0
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 2.0e-151 540.0 403 70.7
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 3.3e-151 539.3 463 63.3
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 4.4e-151 538.9 387 72.9
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.4e-151 538.9 451 64.3
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.3e-150 537.3 397 70.8
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.8e-150 536.2 425 68.2
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 8.2e-150 534.6 497 61.0
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.1e-149 534.3 410 69.5
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.4e-149 533.1 508 60.0
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.3e-149 531.9 463 63.1
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 7.0e-149 531.6 442 65.8
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.0e-148 530.0 395 69.1
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 7.7e-148 528.1 453 63.6
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.7e-148 528.1 406 69.2
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.0e-147 527.7 461 63.8
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.7e-147 526.9 499 59.5
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 6.5e-147 525.0 454 63.9
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 8.5e-147 524.6 488 61.1
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-146 524.2 454 62.6
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.5e-146 523.9 508 57.9
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.9e-146 523.5 498 60.0
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.5e-146 523.1 414 68.6
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 7.2e-146 521.5 508 57.1
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.7e-145 518.8 451 63.6
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.3e-144 516.5 451 63.6
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 8.8e-144 514.6 427 65.6
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 3.1e-141 506.1 403 68.5
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 9.1e-141 504.6 440 63.9
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 9.1e-141 504.6 479 59.7
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 9.1e-141 504.6 469 59.9
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.9e-140 501.9 540 53.7
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.7e-139 500.4 394 67.0
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 6.5e-139 498.4 394 66.5
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.1e-137 493.4 397 66.2
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.0e-136 489.6 357 71.7
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.0e-135 486.9 357 71.1
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 8.3e-126 454.9 397 61.2
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 2.0e-124 450.3 390 62.6
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 8.0e-121 438.3 388 59.5
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.4e-120 437.6 507 52.5
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 7.5e-119 431.8 494 52.0
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 7.5e-119 431.8 388 59.8
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 9.8e-119 431.4 388 59.3
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.1e-117 427.9 290 75.2
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 6.1e-113 412.1 421 58.9
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.2e-111 407.9 424 55.0
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.2e-108 397.9 408 55.6
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 5.6e-106 389.0 402 56.0
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 2.8e-105 386.7 403 56.1
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 2.8e-105 386.7 403 56.1
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 4.7e-105 386.0 404 55.2
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.1e-104 384.8 399 56.4
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 9.8e-103 378.3 407 54.3
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 2.2e-102 377.1 411 54.0
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 4.0e-96 356.3 392 53.3
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 4.0e-96 356.3 392 53.3
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.4e-93 347.8 396 51.3
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 2.4e-93 347.1 465 46.5
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.5e-92 343.2 398 51.8
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.5e-92 343.2 398 51.8
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.8e-88 330.9 239 72.8
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 2.6e-87 327.0 338 54.7
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.4e-85 320.5 235 69.8
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 3.9e-59 233.4 388 36.9
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 1.2e-55 221.9 138 79.7
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 2.0e-55 221.1 184 66.3
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.4e-48 198.4 468 34.2
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.8e-46 190.3 411 32.8
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.1e-45 188.7 463 35.2
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 1.8e-43 181.4 152 59.9
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 6.7e-43 179.5 123 72.4
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 6.9e-40 169.5 394 34.5
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 5.0e-38 163.3 151 59.6
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.1e-36 157.9 261 42.1
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 7.9e-36 156.0 134 62.7
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.7e-33 148.3 121 63.6
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 3.7e-33 147.1 196 46.4
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 5.7e-26 123.2 121 56.2
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.2e-23 115.5 296 30.4
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 2.3e-19 101.3 71 73.2
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 4.4e-18 97.1 104 52.9
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.2e-09 68.2 48 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 9.2e-08 62.8 334 24.3
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.6e-07 62.0 60 53.3


User provided reference genes

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