Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.3e-84 317.0 252 100.0
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.1e-78 297.4 251 94.8
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 4.7e-66 255.4 252 88.9
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 7.7e-61 238.0 254 84.6
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 6.5e-60 235.0 252 84.1
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 3.9e-57 225.7 252 81.7
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 8.8e-57 224.6 251 82.5
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.7e-44 183.7 203 58.1
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.7e-42 176.4 251 70.9
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.7e-40 168.7 194 73.7
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 9.8e-40 167.9 246 69.9
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 2.0e-37 160.2 249 70.7
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 3.5e-37 159.5 254 69.3
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 7.7e-37 158.3 251 69.7
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 2.9e-36 156.4 254 69.3
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 6.6e-36 155.2 240 71.7
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.2e-35 152.5 237 70.0
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 3.6e-34 149.4 260 55.4
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 8.0e-34 148.3 236 69.1
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.0e-33 147.9 252 67.9
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 2.3e-33 146.7 240 70.8
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 4.0e-33 146.0 250 66.4
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 5.2e-33 145.6 236 67.8
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 6.8e-33 145.2 252 64.7
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 8.9e-33 144.8 253 64.8
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.5e-32 144.1 247 67.2
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 2.6e-32 143.3 238 68.5
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.4e-32 142.9 244 64.3
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 5.7e-32 142.1 248 66.5
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.8e-31 139.8 247 63.6
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 3.7e-31 139.4 255 65.9
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 2.4e-30 136.7 253 66.4
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 4.1e-30 136.0 264 62.5
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 5.4e-30 135.6 245 66.1
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 5.4e-30 135.6 298 57.7
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 9.2e-30 134.8 238 68.9
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.0e-29 133.7 238 68.9
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 2.7e-29 133.3 272 61.4
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.7e-29 133.3 238 68.5
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 4.5e-29 132.5 241 64.7
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 2.3e-28 130.2 252 54.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.9e-28 129.4 238 68.5
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 5.0e-28 129.0 259 61.0
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 6.6e-28 128.6 239 68.2
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 8.6e-28 128.3 267 61.8
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 8.6e-28 128.3 253 64.4
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 8.6e-28 128.3 255 64.7
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 2.5e-27 126.7 263 62.4
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 3.3e-27 126.3 242 66.1
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 4.3e-27 125.9 248 61.7
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 5.6e-27 125.6 80 73.8
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 9.5e-27 124.8 254 61.0
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 2.1e-26 123.6 80 75.0
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 2.8e-26 123.2 69 82.6
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 2.8e-26 123.2 252 63.1
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 4.7e-26 122.5 69 81.2
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 8.0e-26 121.7 254 63.8
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.0e-25 121.3 77 72.7
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 3.1e-25 119.8 238 63.0
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 4.0e-25 119.4 78 73.1
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 4.0e-25 119.4 247 63.2
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 5.2e-25 119.0 68 80.9
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 5.2e-25 119.0 258 59.7
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 5.2e-25 119.0 238 64.3
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 8.9e-25 118.2 81 70.4
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.2e-24 117.9 243 63.0
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.2e-24 117.9 243 63.0
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.2e-24 117.9 241 58.1
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.0e-24 117.1 239 65.3
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 2.6e-24 116.7 260 61.9
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.6e-24 116.7 239 64.9
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 4.4e-24 115.9 243 63.4
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 4.4e-24 115.9 243 63.4
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 4.4e-24 115.9 381 45.9
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 4.4e-24 115.9 268 58.2
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 7.5e-24 115.2 238 63.0
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 7.5e-24 115.2 257 60.3
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 9.8e-24 114.8 243 63.4
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 9.8e-24 114.8 238 61.8
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 4.9e-23 112.5 238 63.4
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 6.4e-23 112.1 72 72.2
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 8.3e-23 111.7 265 58.9
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.4e-22 110.9 238 62.2
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.4e-22 110.9 69 73.9
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 2.4e-22 110.2 238 63.0
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 2.4e-22 110.2 254 59.8
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 3.2e-22 109.8 240 62.1
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 3.2e-22 109.8 261 58.2
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 3.2e-22 109.8 261 58.2
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 7.0e-22 108.6 243 60.5
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 1.6e-21 107.5 244 62.3
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 2.7e-21 106.7 293 53.2
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 1.0e-20 104.8 242 59.5
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 2.5e-19 100.1 70 70.0
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 2.3e-17 93.6 261 57.1
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 4.0e-17 92.8 78 59.0
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.2e-16 91.3 78 59.0
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 1.5e-16 90.9 69 59.4
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.5e-16 90.9 238 61.3
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 3.4e-16 89.7 203 67.5
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 5.8e-16 89.0 62 71.0
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 5.8e-16 89.0 237 59.5
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 9.8e-16 88.2 68 61.8
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 8.3e-15 85.1 203 65.5
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.9e-14 84.0 111 45.9
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.7e-13 80.1 204 67.2
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 4.6e-13 79.3 62 59.7
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 7.8e-13 78.6 245 52.7
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 2.3e-12 77.0 81 55.6
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 2.5e-11 73.6 63 57.1
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 5.6e-11 72.4 102 50.0
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 7.3e-11 72.0 272 52.2
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 7.3e-11 72.0 34 94.1
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 2.0e-08 63.9 51 51.0
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 2.0e-08 63.9 197 60.4
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.3e-07 61.2 45 57.8
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.3e-07 58.5 36 72.2
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 3.2e-06 56.6 36 69.4


User provided reference genes

Program Settings