Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.3e-57 226.1 108 100.0
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 2.4e-43 178.7 109 82.6
Gohir.1Z049482 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.1e-31 137.5 79 84.8
Nitab4.5_0005831g0110 Nicotiana tabacum HOM05D008016 ORTHO05D011667 3.7e-28 128.3 82 78.0
RcHm_v2.0_Chr4g0392721 Rosa chinensis HOM05D008016 ORTHO05D004271 4.8e-28 127.9 80 81.2
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 2.0e-26 122.5 119 58.8
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.0e-26 122.5 79 77.2
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.0e-26 122.5 79 77.2
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 2.0e-26 122.5 79 77.2
Solyc06g043035.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 3.9e-22 108.2 64 81.2
BraSC59t46557Z Brassica rapa HOM05D008016 ORTHO05D004271 7.4e-21 104.0 62 82.3
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 4.1e-19 98.2 58 81.0
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.0e-18 95.9 55 83.6
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.0e-17 93.6 55 81.8
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-17 93.2 50 84.0
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 2.2e-17 92.4 55 80.0
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 2.2e-17 92.4 55 80.0
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 2.2e-17 92.4 55 80.0
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 2.2e-17 92.4 55 80.0
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 2.2e-17 92.4 55 80.0
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 2.2e-17 92.4 55 80.0
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 2.2e-17 92.4 55 80.0
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 2.2e-17 92.4 55 80.0
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 2.2e-17 92.4 55 80.0
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 2.2e-17 92.4 61 77.0
BolSC44t60833H Brassica oleracea HOM05D008016 ORTHO05D004271 8.5e-17 90.5 54 79.6
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 2.7e-15 85.5 92 57.6
Lalb_Chr15g0080721 Lupinus albus HOM05D008016 ORTHO05D004271 1.4e-14 83.2 58 74.1
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 3.0e-14 82.0 52 78.8
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 8.8e-14 80.5 54 75.9
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 5.7e-13 77.8 92 54.3
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 5.7e-13 77.8 92 54.3
Solyc11g044665.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 2.2e-12 75.9 70 60.0
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.7e-12 75.1 44 77.3
MD00G1140100 Malus domestica HOM05D008016 ORTHO05D004271 8.2e-12 73.9 57 64.9
Gohir.A02G134102 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.4e-11 73.2 41 85.4
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 7.0e-11 70.9 44 75.0
Nitab4.5_0000002g0310 Nicotiana tabacum HOM05D010190 ORTHO05D004271 1.6e-10 69.7 64 59.4
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 2.6e-10 68.9 33 97.0
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.5e-10 68.2 41 78.0
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 2.2e-09 65.9 37 81.1
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.9e-09 65.5 35 85.7
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 3.8e-09 65.1 41 75.6
Gohir.1Z049580 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.5e-09 64.3 41 78.0
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 4.2e-08 61.6 121 39.7
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 1.2e-07 60.1 44 63.6
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.6e-07 59.7 36 75.0
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 4.7e-07 58.2 34 82.4
Peaxi162Scf00136g00086 Petunia axillaris HOM05D007952 ORTHO05D004271 4.7e-07 58.2 28 92.9
Lsat_1_v5_gn_5_36201 Lactuca sativa HOM05D048309 ORTHO05D031508 8.0e-07 57.4 30 86.7
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 3.0e-06 55.5 28 89.3
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 3.0e-06 55.5 28 89.3
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 3.0e-06 55.5 28 89.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 3.0e-06 55.5 28 89.3
Nitab4.5_0006096g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 3.0e-06 55.5 28 89.3
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 3.0e-06 55.5 28 89.3
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 8.8e-06 53.9 28 85.7


User provided reference genes

Program Settings