Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001168g0090 Nicotiana tabacum HOM05D006122 ORTHO05D007426 7.7e-123 443.7 209 100.0
Peaxi162Scf01003g00013 Petunia axillaris HOM05D006122 ORTHO05D007426 8.8e-119 430.3 208 96.2
Solyc11g005060.2 Solanum lycopersicum HOM05D006122 ORTHO05D007426 2.6e-115 418.7 208 93.3
CAN.G1227.1 Capsicum annuum HOM05D006122 ORTHO05D007426 1.2e-112 409.8 210 91.4
Sopen11g001060 Solanum pennellii HOM05D006122 ORTHO05D007426 2.1e-112 409.1 222 87.4
Cfa003494 Carpinus fangiana HOM05D006122 ORTHO05D007426 2.0e-107 392.5 209 85.2
DCAR_022657 Daucus carota HOM05D006122 ORTHO05D007426 4.5e-107 391.3 207 84.5
Ciclev10026416m.g Citrus clementina HOM05D006122 ORTHO05D007426 3.8e-106 388.3 209 83.7
Dinv37838 Davidia involucrata HOM05D006122 ORTHO05D007426 1.4e-105 386.3 208 84.1
Migut.I01117 Erythranthe guttata HOM05D006122 ORTHO05D007426 3.2e-105 385.2 209 81.8
Thecc.06G126900 Theobroma cacao HOM05D006122 ORTHO05D007426 7.2e-105 384.0 209 84.7
Hma1.2p1_0229F.1_g096920 Hydrangea macrophylla HOM05D006122 ORTHO05D007426 1.2e-104 383.3 207 84.1
TAR383G0669 Trochodendron aralioides HOM05D006122 ORTHO05D007426 3.6e-104 381.7 209 83.3
CSS0025263 Camellia sinensis var. sinensis HOM05D006122 ORTHO05D007426 6.1e-104 380.9 207 84.1
PGR102G1167 Punica granatum HOM05D006122 ORTHO05D007426 8.0e-104 380.6 209 82.8
Prupe.3G035300 Prunus persica HOM05D006122 ORTHO05D007426 1.4e-103 379.8 209 81.8
MSTRG.22530 Avicennia marina HOM05D006122 ORTHO05D007426 1.8e-103 379.4 209 82.3
RcHm_v2.0_Chr2g0146911 Rosa chinensis HOM05D006122 ORTHO05D007426 1.8e-103 379.4 209 82.3
COL.COLO4_30828 Corchorus olitorius HOM05D006122 ORTHO05D007426 6.7e-103 377.5 209 81.8
FvH4_6g35380 Fragaria vesca HOM05D006122 ORTHO05D007426 6.7e-103 377.5 209 81.8
Eucgr.J02608 Eucalyptus grandis HOM05D006122 ORTHO05D007426 1.5e-102 376.3 209 82.3
CiPaw.02G133000 Carya illinoinensis HOM05D006122 ORTHO05D007426 2.6e-102 375.6 207 82.6
Actinidia26007 Actinidia chinensis HOM05D006122 ORTHO05D007426 4.4e-102 374.8 209 81.3
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 9.7e-102 373.6 209 82.3
Gohir.A05G138000 Gossypium hirsutum HOM05D006122 ORTHO05D007426 2.2e-101 372.5 209 80.4
QL05p002004 Quercus lobata HOM05D006122 ORTHO05D007426 2.2e-101 372.5 209 80.4
MD17G1150700 Malus domestica HOM05D006122 ORTHO05D007426 2.8e-101 372.1 207 81.2
Manes.11G015100 Manihot esculenta HOM05D006122 ORTHO05D007426 3.7e-101 371.7 209 82.3
Duzib235G1006 Durio zibethinus HOM05D006122 ORTHO05D007426 6.3e-101 370.9 209 80.9
ECA238G0672 Erigeron canadensis HOM05D006122 ORTHO05D007426 6.3e-101 370.9 209 79.9
Gorai.009G144400 Gossypium raimondii HOM05D006122 ORTHO05D007426 8.2e-101 370.5 209 79.9
vmacro22018 Vaccinium macrocarpon HOM05D006122 ORTHO05D007426 8.2e-101 370.5 221 77.8
GSVIVG01016699001 Vitis vinifera HOM05D006122 ORTHO05D007426 1.1e-100 370.2 209 78.9
Cc04_g00910 Coffea canephora HOM05D006122 ORTHO05D007426 1.8e-100 369.4 210 77.6
Gohir.D05G140100 Gossypium hirsutum HOM05D006122 ORTHO05D007426 2.4e-100 369.0 209 79.9
Potri.010G076600 Populus trichocarpa HOM05D006122 ORTHO05D007426 2.4e-100 369.0 209 81.3
Lj5A31T62 Lonicera japonica HOM05D006122 ORTHO05D007426 3.1e-100 368.6 228 74.1
AL1G29610 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 4.1e-100 368.2 208 78.4
MD09G1176300 Malus domestica HOM05D006122 ORTHO05D007426 5.3e-100 367.9 207 79.7
AT1G17350 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 4.5e-99 364.8 208 77.4
HanXRQChr09g0277171 Helianthus annuus HOM05D006122 ORTHO05D007426 4.5e-99 364.8 209 78.0
Carub.0001s1711 Capsella rubella HOM05D006122 ORTHO05D007426 5.9e-99 364.4 208 77.4
AUR62018816 Chenopodium quinoa HOM05D006122 ORTHO05D007426 7.7e-99 364.0 216 77.3
CARHR017950 Cardamine hirsuta HOM05D006122 ORTHO05D007426 1.3e-98 363.2 208 76.4
Rhsim12G0212300 Rhododendron simsii HOM05D006122 ORTHO05D007426 1.3e-98 363.2 258 67.8
Thhalv10008577m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 1.7e-98 362.8 208 76.4
Hund14473 Selenicereus undatus HOM05D006122 ORTHO05D007426 1.7e-98 362.8 234 74.4
CANSAT56G0704 Cannabis sativa HOM05D006122 ORTHO05D007426 2.2e-98 362.5 209 76.1
Glyma.07G043200 Glycine max HOM05D006122 ORTHO05D007426 2.9e-98 362.1 209 78.0
Glyma.16G011600 Glycine max HOM05D006122 ORTHO05D007426 3.8e-98 361.7 209 78.0
PSO063G2922 Papaver somniferum HOM05D006122 ORTHO05D007426 5.0e-98 361.3 208 80.8
VMungo0331G0398 Vigna mungo HOM05D006122 ORTHO05D007426 5.0e-98 361.3 209 78.9
Ca_23414_v3 Cicer arietinum L. HOM05D006122 ORTHO05D007426 8.5e-98 360.5 209 77.5
Lj3g0011237 Lotus japonicus HOM05D006122 ORTHO05D007426 8.5e-98 360.5 209 78.5
Os01g0727400 Oryza sativa ssp. japonica HOM05D006122 ORTHO05D007426 8.5e-98 360.5 209 77.5
Sp1g15490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 8.5e-98 360.5 208 76.0
SpUn0033_0060 Schrenkiella parvula HOM05D006122 ORTHO05D007426 8.5e-98 360.5 208 76.0
Phvul.010G126800 Phaseolus vulgaris HOM05D006122 ORTHO05D007426 3.2e-97 358.6 209 78.0
A06p13310 Brassica napus HOM05D006122 ORTHO05D007426 5.5e-97 357.8 214 75.2
Ah.07g199940 Amaranthus hybridus HOM05D006122 ORTHO05D007426 7.2e-97 357.5 209 78.5
Aqoxy3G03460 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 7.2e-97 357.5 209 78.5
MELO3C017781.2 Cucumis melo HOM05D006122 ORTHO05D007426 7.2e-97 357.5 209 77.5
Psat4g219480 Pisum sativum HOM05D006122 ORTHO05D007426 9.4e-97 357.1 209 75.1
SGA_v2.0_scaffold71G23902 Striga asiatica HOM05D006122 ORTHO05D007426 2.1e-96 355.9 225 73.3
BcaNung07320 Brassica carinata HOM05D006122 ORTHO05D007426 4.7e-96 354.8 207 77.3
TWI59G0171 Tripterygium wilfordii HOM05D006122 ORTHO05D007426 6.1e-96 354.4 207 78.3
BraA06t24484Z Brassica rapa HOM05D006122 ORTHO05D007426 8.0e-96 354.0 212 75.5
Lalb_Chr10g0101271 Lupinus albus HOM05D006122 ORTHO05D007426 8.0e-96 354.0 207 76.8
Sed0027026 Sechium edule HOM05D006122 ORTHO05D007426 1.0e-95 353.6 209 75.6
C05p15780 Brassica napus HOM05D006122 ORTHO05D007426 1.4e-95 353.2 214 75.2
BolC5t30283H Brassica oleracea HOM05D006122 ORTHO05D007426 1.4e-95 353.2 214 75.2
unitig_32.g10995 Utricularia gibba HOM05D006122 ORTHO05D007426 1.4e-95 353.2 207 77.3
PSO832G0128 Papaver somniferum HOM05D006122 ORTHO05D007426 1.8e-95 352.8 207 79.2
AT1G72420 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 4.0e-95 351.7 209 77.0
Medtr8g022330 Medicago truncatula HOM05D006122 ORTHO05D007426 4.0e-95 351.7 209 74.2
ATR0068G105 Amborella trichopoda HOM05D006122 ORTHO05D007426 5.2e-95 351.3 207 76.3
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 6.7e-95 350.9 209 76.6
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 1.2e-94 350.1 209 76.1
CsaV3_4G002610 Cucumis sativus L. HOM05D006122 ORTHO05D007426 1.2e-94 350.1 209 75.1
THA.LOC104812266 Tarenaya hassleriana HOM05D006122 ORTHO05D007426 2.6e-94 349.0 206 75.2
CARHR065320 Cardamine hirsuta HOM05D006122 ORTHO05D007426 1.3e-93 346.7 209 75.1
EL10Ac5g12242 Beta vulgaris HOM05D006122 ORTHO05D007426 1.7e-93 346.3 209 76.6
Zm00001eb361800 Zea mays HOM05D006122 ORTHO05D007426 1.1e-92 343.6 210 76.7
HPP92_000787 Vanilla planifolia HOM05D006122 ORTHO05D007426 3.1e-92 342.0 207 73.4
Thhalv10019098m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 4.1e-92 341.7 209 75.1
HPP92_026812 Vanilla planifolia HOM05D006122 ORTHO05D007426 4.5e-91 338.2 207 72.9
arahy.Tifrunner.gnm1.ann1.JC3XNH Arachis hypogaea HOM05D006122 ORTHO05D007426 5.0e-90 334.7 211 72.0
Lsat_1_v5_gn_8_4120 Lactuca sativa HOM05D006122 ORTHO05D007426 8.5e-90 334.0 210 73.8
arahy.Tifrunner.gnm1.ann1.DIA1Z1 Arachis hypogaea HOM05D006122 ORTHO05D007426 1.5e-89 333.2 211 71.6
CDE02G1839 Ceratophyllum demersum HOM05D006122 ORTHO05D007426 1.1e-81 307.0 207 67.6
Oeu000384.1 Olea europaea HOM05D006122 ORTHO05D007426 2.5e-81 305.8 212 67.9
Aa31LG4G2750 Aethionema arabicum HOM05D006122 ORTHO05D007426 2.8e-77 292.4 196 70.4
AUR62007187 Chenopodium quinoa HOM05D006122 ORTHO05D007426 1.4e-76 290.0 207 67.6
MBI13_g36947_MAGBIO Magnolia biondii HOM05D006122 ORTHO05D007426 1.2e-70 270.4 151 80.1
A07p38600 Brassica napus HOM05D006122 ORTHO05D007426 1.9e-68 263.1 225 60.4
Duzib160G0673 Durio zibethinus HOM05D006122 ORTHO05D007426 2.4e-68 262.7 148 81.1
C06p46770 Brassica napus HOM05D006122 ORTHO05D007426 1.2e-67 260.4 214 61.7
FAN09G0799 Fragaria x ananassa HOM05D006122 ORTHO05D007426 1.2e-67 260.4 156 78.8
Sc01g0007910 Simmondsia chinensis HOM05D006122 ORTHO05D007426 2.7e-67 259.2 141 82.3
BolC6t39721H Brassica oleracea HOM05D006122 ORTHO05D007426 8.6e-66 254.2 234 55.6
BraA07t31418Z Brassica rapa HOM05D006122 ORTHO05D007426 2.5e-65 252.7 252 54.0
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 5.6e-65 251.5 141 78.0
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 1.2e-64 250.4 148 74.3
Haze_16093 Corylus avellana HOM05D006122 ORTHO05D007426 3.7e-61 238.8 265 52.1
Haze_16097 Corylus avellana HOM05D006122 ORTHO05D007426 3.7e-61 238.8 265 52.1
Aqoxy301s003 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 1.9e-60 236.5 151 73.5
FAN14G0976 Fragaria x ananassa HOM05D006122 ORTHO05D007426 1.9e-60 236.5 209 57.9
Nn1g04517 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.9e-60 236.5 209 58.9
Cpa.g.sc25.169 Carica papaya HOM05D006122 ORTHO05D007426 7.8e-59 231.1 209 56.9
Pp3c3_21840 Physcomitrium patens HOM05D006122 ORTHO05D007426 3.0e-58 229.2 208 50.5
BcaB03g14991 Brassica carinata HOM05D006122 ORTHO05D007426 5.1e-58 228.4 142 71.8
Nn4g23234 Nelumbo nucifera HOM05D006122 ORTHO05D007426 5.1e-58 228.4 135 77.0
SalBow5G3255 Salvia bowleyana HOM05D006122 ORTHO05D007426 5.6e-57 224.9 180 61.1
Mapoly0158s0026 Marchantia polymorpha HOM05D006122 ORTHO05D007426 6.4e-53 211.5 207 46.4
CBR_g33997 Chara braunii HOM05D006122 ORTHO05D007426 5.4e-52 208.4 206 44.7
SHI23560 Sapria himalayana HOM05D006122 ORTHO05D007426 3.9e-50 202.2 119 75.6
SalBow5G2173 Salvia bowleyana HOM05D006122 ORTHO05D007426 7.6e-46 188.0 129 68.2
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 2.6e-38 162.9 93 76.3
SMO165G0005 Selaginella moellendorffii HOM05D006122 ORTHO05D007426 3.3e-33 146.0 198 35.4
AagrBONN_evm.TU.Sc2ySwM_362.2335 Anthoceros agrestis HOM05D006122 ORTHO05D007426 4.8e-32 142.1 189 38.6
CAN.G526.12 Capsicum annuum HOM05D006122 ORTHO05D007426 1.2e-30 137.5 156 50.0
Actinidia31156 Actinidia chinensis HOM05D006122 ORTHO05D007426 5.6e-25 118.6 94 61.7
TPR.G16651 Trifolium pratense HOM05D006122 ORTHO05D007426 2.4e-23 113.2 69 72.5
MCO13G567 Micromonas commoda HOM05D006122 ORTHO05D007426 9.0e-23 111.3 269 27.9
BcaB03g14993 Brassica carinata HOM05D006122 ORTHO05D007426 8.2e-16 88.2 57 68.4
Cre02.g076750 Chlamydomonas reinhardtii HOM05D006122 ORTHO05D007426 1.1e-15 87.8 199 28.1
Nn1g08880 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.3e-13 80.9 37 89.2
Actinidia31157 Actinidia chinensis HOM05D006122 ORTHO05D007426 1.6e-11 73.9 37 83.8
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 5.7e-09 65.5 192 28.6
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 7.4e-09 65.1 170 27.1
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 1.3e-08 64.3 164 27.4
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 1.3e-08 64.3 164 27.4
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 1.3e-08 64.3 164 27.4
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 1.3e-08 64.3 180 26.1
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 1.3e-08 64.3 192 28.6
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 1.6e-08 63.9 200 27.5
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 1.6e-08 63.9 166 28.9
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 1.6e-08 63.9 192 28.6
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 6.3e-08 62.0 166 26.5
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 8.2e-08 61.6 181 26.0
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 1.4e-07 60.8 182 24.7
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.8e-07 60.5 192 28.1
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 1.8e-07 60.5 192 27.1
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 1.8e-07 60.5 182 27.5
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 3.1e-07 59.7 184 27.7
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 3.1e-07 59.7 184 27.7
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 3.1e-07 59.7 152 26.3
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 4.1e-07 59.3 184 27.7
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 4.1e-07 59.3 184 27.7
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 4.1e-07 59.3 163 27.0
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 4.1e-07 59.3 169 28.4
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 4.1e-07 59.3 164 27.4
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 4.1e-07 59.3 181 27.1
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 5.3e-07 58.9 171 27.5
Pp3c26_9450 Physcomitrium patens HOM05D005310 ORTHO05D006920 5.3e-07 58.9 188 24.5
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 9.0e-07 58.2 182 26.9
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 1.2e-06 57.8 137 30.7
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 1.2e-06 57.8 164 28.7
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 1.2e-06 57.8 162 27.2
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.5e-06 57.4 192 27.6
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 2.0e-06 57.0 195 27.2
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 2.0e-06 57.0 165 27.9
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 2.6e-06 56.6 163 25.8
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 2.6e-06 56.6 163 25.8
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 2.6e-06 56.6 164 26.2
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 3.4e-06 56.2 152 25.7
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 3.4e-06 56.2 152 26.3
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 7.7e-06 55.1 153 26.8
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 1.0e-05 54.7 137 27.7
RcHm_v2.0_Chr5g0011651 Rosa chinensis HOM05D005310 ORTHO05D006920 1.0e-05 54.7 152 27.0


User provided reference genes

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