Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 4.0e-233 811.2 453 100.0
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 3.4e-216 755.0 453 93.6
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 1.3e-207 726.5 456 87.9
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 1.3e-207 726.5 456 88.4
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 7.8e-205 717.2 453 87.4
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 6.4e-199 697.6 468 83.3
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 1.7e-183 646.4 455 83.3
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 4.3e-163 578.6 455 66.6
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 1.6e-162 576.6 453 66.2
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.1e-153 547.4 464 66.8
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 3.1e-153 545.8 396 81.8
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 3.4e-152 542.3 453 63.6
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 1.7e-151 540.0 435 68.5
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 1.6e-149 533.5 454 62.3
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.0e-148 530.8 454 62.8
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.3e-146 523.9 463 61.6
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 1.3e-146 523.9 453 62.5
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 3.7e-146 522.3 453 63.1
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 4.8e-146 521.9 453 68.0
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 1.1e-145 520.8 454 61.7
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 5.3e-145 518.5 454 62.8
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.6e-144 516.2 454 62.6
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 3.4e-144 515.8 455 60.0
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 3.4e-144 515.8 454 62.6
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 5.9e-144 515.0 463 60.9
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 5.9e-144 515.0 455 65.1
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 7.6e-144 514.6 453 60.0
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 2.2e-143 513.1 453 64.9
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.4e-142 510.4 453 59.6
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 1.4e-142 510.4 455 59.8
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 4.2e-142 508.8 454 60.4
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 4.6e-141 505.4 457 58.0
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 1.0e-140 504.2 453 59.4
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 8.8e-140 501.1 453 60.9
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 1.5e-139 500.4 453 60.3
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 5.7e-139 498.4 454 61.0
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 4.8e-138 495.4 453 60.5
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 8.2e-138 494.6 421 63.7
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 8.2e-138 494.6 453 59.2
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.4e-137 493.8 453 59.2
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 6.9e-137 491.5 462 58.9
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 9.1e-137 491.1 453 60.5
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 1.5e-136 490.3 453 58.5
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 2.6e-136 489.6 453 59.8
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 3.4e-136 489.2 457 59.5
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 7.7e-136 488.0 421 62.9
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.0e-135 487.6 456 58.8
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 2.2e-135 486.5 455 55.4
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 1.4e-134 483.8 453 57.8
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 1.4e-134 483.8 453 58.9
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 2.7e-133 479.6 447 58.8
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 6.1e-133 478.4 453 62.5
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 1.8e-132 476.9 503 55.1
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 3.0e-132 476.1 450 59.1
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 3.0e-132 476.1 454 55.7
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 6.7e-132 474.9 453 57.4
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 3.3e-131 472.6 454 58.6
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 3.3e-131 472.6 361 66.8
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.1e-129 467.6 453 55.6
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 2.4e-129 466.5 454 54.8
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 2.4e-129 466.5 454 55.7
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 5.9e-128 461.8 453 57.4
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 7.7e-128 461.5 409 68.2
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 1.3e-127 460.7 468 56.0
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 2.2e-127 459.9 436 58.3
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.8e-127 459.1 453 55.0
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 8.5e-127 458.0 454 55.1
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 8.5e-127 458.0 453 56.7
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.1e-126 457.6 453 54.5
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 1.4e-126 457.2 408 58.6
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 1.9e-126 456.8 379 63.6
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 1.9e-126 456.8 459 58.2
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 2.5e-126 456.4 454 55.5
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.5e-126 456.4 454 61.5
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.5e-126 455.3 453 54.5
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 1.1e-123 447.6 453 53.2
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.7e-122 443.7 454 54.2
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 2.2e-122 443.4 456 53.5
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 4.8e-122 442.2 454 56.6
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 6.3e-122 441.8 436 59.9
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.1e-121 441.0 476 51.9
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 2.4e-121 439.9 457 56.7
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 3.1e-121 439.5 453 58.1
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 9.1e-121 438.0 455 53.0
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 9.1e-121 438.0 454 54.0
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 1.2e-120 437.6 453 53.2
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.0e-120 436.8 485 51.5
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 3.5e-120 436.0 453 55.6
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 3.5e-120 436.0 457 54.0
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 7.7e-120 434.9 453 52.5
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 1.0e-119 434.5 453 55.2
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 2.2e-119 433.3 459 52.5
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 3.8e-119 432.6 453 53.0
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 5.5e-118 428.7 453 52.1
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 1.6e-117 427.2 453 54.1
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 4.7e-117 425.6 460 55.2
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 6.1e-117 425.2 454 54.4
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 1.0e-116 424.5 453 54.7
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 2.3e-116 423.3 454 52.9
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 3.0e-116 422.9 453 52.1
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 5.2e-116 422.2 454 52.2
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 2.0e-115 420.2 442 51.8
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 4.4e-115 419.1 453 51.2
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 9.7e-115 417.9 452 57.5
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 8.2e-114 414.8 451 54.5
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 1.8e-113 413.7 454 54.4
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.2e-112 411.0 454 50.2
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 3.5e-112 409.5 447 53.9
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 4.5e-112 409.1 453 54.1
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 7.7e-112 408.3 540 47.2
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 8.5e-111 404.8 453 51.7
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 2.5e-110 403.3 453 52.5
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 5.5e-110 402.1 469 51.6
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 1.2e-109 401.0 486 48.8
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 2.7e-109 399.8 396 57.1
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 1.8e-108 397.1 425 54.4
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 5.2e-108 395.6 424 55.9
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 3.4e-107 392.9 453 54.1
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 4.8e-106 389.0 458 50.7
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 4.8e-106 389.0 453 50.3
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 6.3e-106 388.7 454 49.8
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 3.1e-105 386.3 485 49.5
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 2.3e-103 380.2 408 52.2
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 1.9e-102 377.1 386 52.8
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 3.6e-101 372.9 422 51.7
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 6.8e-100 368.6 351 53.8
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 2.6e-99 366.7 453 48.1
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 3.7e-98 362.8 460 45.9
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 1.4e-97 360.9 453 47.9
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.0e-97 358.6 502 45.4
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.0e-96 357.1 502 45.2
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.2e-91 341.3 417 50.8
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 3.4e-91 339.7 425 50.6
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 7.0e-89 332.0 357 53.2
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 2.0e-88 330.5 456 43.9
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 3.0e-87 326.6 172 91.9
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 2.6e-83 313.5 454 49.3
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 1.4e-81 307.8 409 42.8
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 3.2e-81 306.6 384 47.4
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 6.0e-72 275.8 172 76.2
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 3.9e-71 273.1 418 38.8
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 6.6e-71 272.3 255 51.8
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 1.5e-70 271.2 178 68.5
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 1.8e-68 264.2 271 50.2
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 8.9e-68 261.9 270 48.9
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 1.5e-67 261.2 269 48.0
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 1.8e-47 194.5 231 60.6
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 1.8e-47 194.5 240 50.0
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 1.1e-44 185.3 327 39.8
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 2.4e-44 184.1 132 65.9
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 2.8e-37 160.6 282 40.1
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 2.7e-32 144.1 112 64.3
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 1.0e-31 142.1 202 36.1
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 5.7e-30 136.3 91 67.0
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 3.7e-29 133.7 196 33.7
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 1.3e-26 125.2 145 40.0
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 1.9e-25 121.3 79 70.9
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 7.4e-22 109.4 125 56.8
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 4.2e-17 93.6 120 51.7
Cfa026408 Carpinus fangiana HOM05D004208 ORTHO05D121639 9.7e-14 82.4 235 27.2
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 2.2e-13 81.3 99 50.5
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 5.3e-12 76.6 46 71.7
HanXRQChr10g0299451 Helianthus annuus HOM05D004208 ORTHO05D219928 3.6e-08 63.9 50 58.0
MD09G1008600 Malus domestica HOM05D004208 ORTHO05D005156 2.6e-06 57.8 64 43.8


User provided reference genes

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