Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001164g0070 Nicotiana tabacum HOM05D009490 ORTHO05D011730 7.8e-106 387.1 191 100.0
Nitab4.5_0009401g0030 Nicotiana tabacum HOM05D009490 ORTHO05D011730 3.2e-67 258.8 149 85.9
Nitab4.5_0004703g0010 Nicotiana tabacum HOM05D009490 ORTHO05D011730 2.3e-65 252.7 161 78.9
Nitab4.5_0000209g0160 Nicotiana tabacum HOM05D009490 ORTHO05D011730 3.3e-64 248.8 141 85.1
Nitab4.5_0000045g0180 Nicotiana tabacum HOM05D009490 ORTHO05D011730 2.6e-61 239.2 149 80.5
Nitab4.5_0000574g0210 Nicotiana tabacum HOM05D009490 ORTHO05D011730 7.9e-58 227.6 135 83.7
Nitab4.5_0002918g0100 Nicotiana tabacum HOM05D009490 ORTHO05D011730 5.1e-49 198.4 132 75.8
Nitab4.5_0003027g0030 Nicotiana tabacum HOM05D009490 ORTHO05D011730 2.7e-42 176.0 160 60.6
Nitab4.5_0006425g0060 Nicotiana tabacum HOM05D009490 ORTHO05D011730 7.4e-40 167.9 97 85.6
Nitab4.5_0000150g0010 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.8e-38 163.3 166 58.4
Nitab4.5_0000030g0050 Nicotiana tabacum HOM05D009490 ORTHO05D011730 5.9e-37 158.3 92 84.8
Nitab4.5_0013034g0050 Nicotiana tabacum HOM05D009490 ORTHO05D011730 6.1e-26 121.7 100 64.0
Nitab4.5_0000335g0190 Nicotiana tabacum HOM05D009490 ORTHO05D011730 3.0e-25 119.4 113 60.2
Nitab4.5_0000882g0100 Nicotiana tabacum HOM05D009490 ORTHO05D011730 2.6e-21 106.3 54 92.6
Nitab4.5_0010993g0030 Nicotiana tabacum HOM05D009490 ORTHO05D011730 7.7e-21 104.8 60 85.0
Nitab4.5_0000033g0320 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.1e-19 100.9 54 88.9
Peaxi162Scf00318g00042 Petunia axillaris HOM05D024560 ORTHO05D000482 3.6e-18 95.9 139 38.1
Nitab4.5_0000459g0010 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.1e-14 84.3 67 67.2
Nitab4.5_0000783g0300 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.8e-14 83.6 143 40.6
Nitab4.5_0013034g0010 Nicotiana tabacum HOM05D009490 ORTHO05D011730 9.1e-14 81.3 45 86.7
Nitab4.5_0000160g0030 Nicotiana tabacum HOM05D009490 ORTHO05D011730 8.5e-12 74.7 66 63.6
Sopen11g025370 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-11 74.3 108 39.8
Nitab4.5_0000354g0190 Nicotiana tabacum HOM05D009490 ORTHO05D011730 3.2e-11 72.8 45 80.0
Sopen01g028070 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-10 69.3 103 37.9
Sopen05g014530 Solanum pennellii HOM05D007732 ORTHO05D010105 3.0e-09 66.2 119 40.3
PGSC0003DMG400025087 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.0e-09 66.2 112 37.5
PGSC0003DMG400001303 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.2e-09 65.5 112 36.6
CANSAT21G1032 Cannabis sativa HOM05D031271 ORTHO05D000397 8.8e-09 64.7 95 35.8
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-08 64.3 121 34.7
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-08 63.9 105 35.2
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-08 63.9 105 35.2
Carub.0001s2955 Capsella rubella HOM05D000675 ORTHO05D000395 2.0e-08 63.5 117 33.3
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-08 62.8 80 37.5
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-08 62.8 80 37.5
CAN.G959.21 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-08 62.8 135 32.6
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 4.4e-08 62.4 92 34.8
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-08 62.4 105 33.3
CANSAT56G0081 Cannabis sativa HOM05D031271 ORTHO05D000397 4.4e-08 62.4 95 34.7
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-08 62.0 103 33.0
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 5.7e-08 62.0 73 39.7
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 5.7e-08 62.0 73 39.7
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-08 61.6 106 34.0
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 7.5e-08 61.6 106 34.0
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-07 60.8 124 31.5
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-07 60.8 98 33.7
Nitab4.5_0013731g0010 Nicotiana tabacum HOM05D001787 ORTHO05D003488 1.3e-07 60.8 40 75.0
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-07 60.5 82 34.1
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-07 60.5 119 32.8
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-07 60.5 119 32.8
CAN.G1236.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-07 60.1 135 32.6
CAN.G1242.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-07 60.1 91 39.6
CAN.G98.8 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-07 60.1 141 30.5
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 2.8e-07 59.7 113 36.3
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 2.8e-07 59.7 121 31.4
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-07 59.3 116 34.5
CAN.G724.18 Capsicum annuum HOM05D000541 ORTHO05D000137 3.7e-07 59.3 79 43.0
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-07 58.9 64 40.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-07 58.9 98 33.7
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 4.8e-07 58.9 98 32.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-07 58.9 123 29.3
Carub.0007s3164 Capsella rubella HOM05D000977 ORTHO05D001094 4.8e-07 58.9 104 33.7
CAN.G681.13 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-07 58.9 79 41.8
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-07 58.5 70 38.6
Nitab4.5_0001356g0090 Nicotiana tabacum HOM05D009490 ORTHO05D011730 6.3e-07 58.5 33 78.8
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 8.3e-07 58.2 73 37.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 8.3e-07 58.2 92 30.4
CAN.G371.112 Capsicum annuum HOM05D000541 ORTHO05D000137 8.3e-07 58.2 141 33.3
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-06 57.8 98 34.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-06 57.8 64 40.6
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-06 57.8 126 28.6
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-06 57.4 98 33.7
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.4e-06 57.4 126 27.8
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 1.4e-06 57.4 71 39.4
CAN.G1328.10 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 57.4 151 32.5
CAN.G567.26 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-06 57.4 141 31.9
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-06 57.4 98 35.7
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-06 57.0 111 29.7
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-06 57.0 81 34.6
Nitab4.5_0004953g0050 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.8e-06 57.0 47 66.0
PGSC0003DMG400017393 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.8e-06 57.0 79 43.0
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-06 56.6 77 35.1
C04p19400 Brassica napus HOM05D000675 ORTHO05D000395 2.4e-06 56.6 77 35.1
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 2.4e-06 56.6 83 33.7
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-06 56.2 73 37.0
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 3.1e-06 56.2 81 33.3
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 3.1e-06 56.2 106 31.1
CAN.G572.21 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-06 56.2 124 32.3
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-06 55.8 90 32.2
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-06 55.8 77 33.8
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-06 55.8 98 32.7
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-06 55.8 73 38.4
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.1e-06 55.8 98 32.7
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-06 55.5 98 34.7
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-06 55.5 144 26.4
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-06 55.5 108 35.2
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 5.4e-06 55.5 60 38.3
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-06 55.5 104 30.8
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 5.4e-06 55.5 83 33.7
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 5.4e-06 55.5 101 32.7
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 7.0e-06 55.1 77 35.1
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 7.0e-06 55.1 105 33.3
CAN.G23.8 Capsicum annuum HOM05D000541 ORTHO05D000137 7.0e-06 55.1 79 40.5
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 7.0e-06 55.1 121 29.8
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 9.1e-06 54.7 76 38.2
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 9.1e-06 54.7 75 34.7
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 9.1e-06 54.7 75 33.3
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.1e-06 54.7 70 41.4
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 9.1e-06 54.7 121 29.8


User provided reference genes

Program Settings