Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.0e-189 664.8 396 100.0
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 6.1e-105 385.2 292 80.1
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.3e-99 366.7 281 73.7
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.4e-93 346.7 411 65.9
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 8.9e-88 328.2 386 63.5
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.7e-86 322.8 407 63.1
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 4.1e-85 319.3 405 63.7
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.2e-73 281.2 420 49.5
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.1e-64 251.5 392 46.9
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 1.4e-64 251.1 408 49.8
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.9e-61 240.7 433 44.3
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.4e-61 240.4 412 50.5
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 5.4e-61 239.2 393 44.0
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 6.0e-60 235.7 404 54.5
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 3.9e-59 233.0 398 47.5
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.6e-57 227.6 401 43.6
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 6.2e-57 225.7 398 46.5
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 1.5e-55 221.1 394 47.5
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 2.6e-55 220.3 401 43.9
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 7.6e-55 218.8 400 46.2
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 2.4e-53 213.8 448 40.4
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 4.2e-53 213.0 424 48.1
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 7.1e-53 212.2 471 43.3
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 1.6e-52 211.1 416 41.3
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.6e-52 211.1 451 42.4
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 1.0e-51 208.4 405 45.4
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 1.3e-51 208.0 444 45.9
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 1.7e-51 207.6 429 41.0
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 8.7e-51 205.3 428 40.2
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 1.1e-50 204.9 408 42.2
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 1.3e-49 201.4 463 44.5
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 1.6e-49 201.1 399 39.6
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 3.6e-49 199.9 472 41.1
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 6.2e-49 199.1 423 41.1
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 6.2e-49 199.1 425 40.2
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 6.2e-49 199.1 398 46.7
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 1.8e-48 197.6 367 43.9
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.4e-48 197.2 428 39.7
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 3.1e-48 196.8 421 41.6
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 9.0e-48 195.3 419 41.8
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 2.4e-45 187.2 442 40.3
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 3.2e-45 186.8 410 47.3
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 9.3e-45 185.3 434 47.7
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.0e-43 181.8 445 41.3
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.0e-43 181.8 406 45.1
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 3.0e-43 180.3 444 41.9
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 3.9e-43 179.9 436 39.2
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 3.9e-43 179.9 436 39.2
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 8.7e-43 178.7 451 33.7
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 4.3e-42 176.4 379 38.0
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 4.3e-42 176.4 438 38.6
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 2.4e-40 170.6 448 40.0
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 4.0e-40 169.9 420 40.5
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.0e-39 167.5 482 37.6
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.6e-39 167.2 288 41.7
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 5.8e-39 166.0 409 43.0
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 5.8e-39 166.0 409 43.0
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 1.3e-38 164.9 316 42.7
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 8.4e-38 162.2 479 36.1
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 1.9e-37 161.0 423 37.1
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 5.5e-37 159.5 482 36.9
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 3.5e-36 156.8 268 48.9
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 1.8e-35 154.5 517 36.2
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.8e-35 154.5 490 35.9
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 3.0e-35 153.7 423 38.3
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 1.9e-34 151.0 520 38.1
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 2.5e-34 150.6 420 37.6
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 2.5e-34 150.6 420 37.6
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 2.5e-34 150.6 237 46.4
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 5.7e-34 149.4 412 39.8
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 9.6e-34 148.7 408 40.2
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.3e-33 148.3 293 45.7
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.6e-33 147.9 214 57.5
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 3.7e-33 146.7 432 35.0
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 6.2e-33 146.0 426 42.5
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 8.2e-33 145.6 431 35.0
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 8.2e-33 145.6 438 34.2
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 8.2e-33 145.6 405 37.0
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.1e-32 145.2 229 41.5
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 5.3e-32 142.9 379 36.9
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 9.0e-32 142.1 418 40.7
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 9.0e-32 142.1 355 35.2
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.2e-31 141.7 417 42.0
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 1.2e-31 141.7 419 35.6
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 1.2e-31 141.7 212 54.7
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 1.5e-31 141.4 416 38.9
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.0e-31 141.0 376 39.1
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.4e-31 140.2 414 39.9
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 5.8e-31 139.4 133 54.1
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 7.6e-31 139.0 391 37.1
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.0e-30 138.7 133 60.2
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 1.0e-30 138.7 214 56.1
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.0e-30 138.7 214 56.1
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 2.2e-30 137.5 421 39.7
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 3.8e-30 136.7 393 33.6
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 8.4e-30 135.6 376 39.6
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 8.4e-30 135.6 415 38.1
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 1.9e-29 134.4 396 33.8
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 1.9e-29 134.4 461 36.0
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 1.9e-29 134.4 207 45.4
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 2.5e-29 134.0 214 54.7
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.1e-28 131.0 141 59.6
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 2.7e-28 130.6 305 36.4
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 3.0e-27 127.1 429 34.5
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.0e-27 127.1 233 39.9
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 3.9e-27 126.7 233 44.2
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 5.7e-26 122.9 222 38.3
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 7.4e-26 122.5 363 39.9
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.2e-25 120.9 367 29.2
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 4.8e-25 119.8 411 39.2
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 1.4e-24 118.2 402 36.1
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.8e-24 117.9 318 34.3
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 9.0e-24 115.5 192 50.5
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 2.0e-23 114.4 225 41.3
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 7.7e-23 112.5 120 73.3
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 5.0e-22 109.8 319 38.9
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 5.0e-22 109.8 302 41.4
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 8.5e-22 109.0 119 69.7
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 1.9e-21 107.8 373 31.6
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 9.4e-21 105.5 126 56.3
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 2.1e-20 104.4 168 42.9
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 5.7e-18 96.3 349 37.2
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 2.8e-17 94.0 396 32.1
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 4.1e-16 90.1 125 55.2
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.3e-14 85.1 246 32.1
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 1.1e-13 82.0 224 29.9
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 1.4e-13 81.6 45 80.0
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 4.7e-12 76.6 140 47.9
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 1.8e-11 74.7 158 49.4
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 2.3e-11 74.3 401 27.9
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 3.3e-10 70.5 135 55.6
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 9.7e-10 68.9 154 40.3
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 5.9e-07 59.7 170 36.5


User provided reference genes

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