Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001153g0100 Nicotiana tabacum HOM05D000540 ORTHO05D008105 1.0e-81 306.6 150 100.0
Nitab4.5_0011987g0020 Nicotiana tabacum HOM05D000540 ORTHO05D008105 7.1e-46 187.6 159 66.0
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-40 169.9 93 86.0
Solyc00g500273.1 Solanum lycopersicum HOM05D000540 ORTHO05D008105 1.5e-40 169.9 93 86.0
PGSC0003DMG400021035 Solanum tuberosum HOM05D000540 ORTHO05D008105 1.5e-40 169.9 93 86.0
Lj2A1229G102 Lonicera japonica HOM05D000540 ORTHO05D000681 7.6e-40 167.5 93 84.9
Nn1g09992 Nelumbo nucifera HOM05D000540 ORTHO05D008105 2.9e-39 165.6 93 84.9
Nn1g10001 Nelumbo nucifera HOM05D000540 ORTHO05D008105 2.9e-39 165.6 93 84.9
Nn1g10092 Nelumbo nucifera HOM05D000540 ORTHO05D008105 2.9e-39 165.6 93 84.9
GSVIVG01038017001 Vitis vinifera HOM05D000540 ORTHO05D008105 1.4e-38 163.3 93 82.8
CANSAT16G0016 Cannabis sativa HOM05D000540 ORTHO05D008105 4.6e-37 158.3 93 81.7
Nitab4.5_0009703g0070 Nicotiana tabacum HOM05D000540 ORTHO05D008105 9.6e-35 150.6 85 84.7
Solyc12g035810.1 Solanum lycopersicum HOM05D000540 ORTHO05D008105 3.0e-28 129.0 93 71.0
Zm00001eb003570 Zea mays HOM05D000540 ORTHO05D008105 1.1e-27 127.1 90 70.0
Zm00001eb049250 Zea mays HOM05D000540 ORTHO05D008105 1.1e-27 127.1 90 70.0
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 3.3e-27 125.6 107 59.8
CiPaw.04G013600 Carya illinoinensis HOM05D002804 ORTHO05D003755 4.3e-27 125.2 91 64.8
Zm00001eb219510 Zea mays HOM05D000540 ORTHO05D008105 5.6e-27 124.8 92 66.3
Rhsim11G0036800 Rhododendron simsii HOM05D000540 ORTHO05D008105 7.4e-27 124.4 107 61.7
Cfa009693 Carpinus fangiana HOM05D002804 ORTHO05D003755 1.6e-26 123.2 88 65.9
Zm00001eb321850 Zea mays HOM05D000540 ORTHO05D008105 1.6e-26 123.2 92 65.2
Zm00001eb321840 Zea mays HOM05D000540 ORTHO05D008105 2.1e-26 122.9 92 65.2
DCAR_015262 Daucus carota HOM05D000540 ORTHO05D008105 1.8e-25 119.8 90 63.3
Hund07747 Selenicereus undatus HOM05D000540 ORTHO05D008105 1.8e-25 119.8 93 62.4
MELO3C011310.2 Cucumis melo HOM05D000540 ORTHO05D008105 9.0e-25 117.5 93 60.2
Ciclev10002977m.g Citrus clementina HOM05D000540 ORTHO05D008105 1.2e-24 117.1 80 65.0
Eucgr.D00430 Eucalyptus grandis HOM05D000540 ORTHO05D008105 1.5e-24 116.7 90 63.3
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 2.0e-24 116.3 98 63.3
Atru.chr7.1082 Acer truncatum HOM05D000540 ORTHO05D008105 2.6e-24 115.9 91 60.4
FAN04G1833 Fragaria x ananassa HOM05D000540 ORTHO05D008105 2.6e-24 115.9 93 59.1
RcHm_v2.0_Chr7g0212161 Rosa chinensis HOM05D000540 ORTHO05D008105 4.5e-24 115.2 87 62.1
Sc06g0008940 Simmondsia chinensis HOM05D000540 ORTHO05D008105 4.5e-24 115.2 93 62.4
Atru.chr1.3246 Acer truncatum HOM05D000540 ORTHO05D008105 5.8e-24 114.8 91 59.3
Ah.08g216160 Amaranthus hybridus HOM05D000540 ORTHO05D008105 5.8e-24 114.8 94 58.5
FvH4_5g23230 Fragaria vesca HOM05D000540 ORTHO05D008105 5.8e-24 114.8 87 62.1
FAN18G0695 Fragaria x ananassa HOM05D000540 ORTHO05D008105 5.8e-24 114.8 87 62.1
FAN18G3733 Fragaria x ananassa HOM05D000540 ORTHO05D008105 5.8e-24 114.8 87 62.1
Thecc.02G009100 Theobroma cacao HOM05D000540 ORTHO05D008105 1.0e-23 114.0 83 67.5
FAN08G1475 Fragaria x ananassa HOM05D000540 ORTHO05D008105 1.7e-23 113.2 87 60.9
BcaB04g20419 Brassica carinata HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BcaB06g26544 Brassica carinata HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BcaC06g35575 Brassica carinata HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
A01p31250 Brassica napus HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
A07p08550 Brassica napus HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
C07p13360 Brassica napus HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BolC1t03932H Brassica oleracea HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BolC7t41830H Brassica oleracea HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BraA01t03249Z Brassica rapa HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BraA03t13476Z Brassica rapa HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
BraA07t28644Z Brassica rapa HOM05D000540 ORTHO05D008105 3.8e-23 112.1 77 68.8
AL8G10730 Arabidopsis lyrata HOM05D000540 ORTHO05D008105 8.4e-23 110.9 77 67.5
AT5G47320 Arabidopsis thaliana HOM05D000540 ORTHO05D008105 8.4e-23 110.9 77 67.5
A03p43380 Brassica napus HOM05D000540 ORTHO05D008105 8.4e-23 110.9 74 70.3
Carub.0008s0045 Capsella rubella HOM05D000540 ORTHO05D008105 8.4e-23 110.9 77 67.5
Thhalv10002665m.g Eutrema salsugineum HOM05D000540 ORTHO05D008105 8.4e-23 110.9 74 70.3
Sp3g21530 Schrenkiella parvula HOM05D000540 ORTHO05D008105 8.4e-23 110.9 74 70.3
C01p39820 Brassica napus HOM05D000540 ORTHO05D008105 1.9e-22 109.8 77 67.5
CsaV3_2G032570 Cucumis sativus L. HOM05D000540 ORTHO05D008105 1.9e-22 109.8 88 58.0
Solyc05g045760.1 Solanum lycopersicum HOM05D000540 ORTHO05D008105 1.9e-22 109.8 75 73.3
Prupe.2G123500 Prunus persica HOM05D000540 ORTHO05D008105 2.5e-22 109.4 83 60.2
BcaC01g03363 Brassica carinata HOM05D000540 ORTHO05D008105 3.2e-22 109.0 74 68.9
BolC3t17591H Brassica oleracea HOM05D000540 ORTHO05D008105 3.2e-22 109.0 74 68.9
SGA_v2.0_scaffold507G52537 Striga asiatica HOM05D000540 ORTHO05D000681 4.2e-22 108.6 80 67.5
GSVIVG01027360001 Vitis vinifera HOM05D000540 ORTHO05D008105 9.3e-22 107.5 95 57.9
Solyc05g045820.1 Solanum lycopersicum HOM05D000540 ORTHO05D008105 1.2e-21 107.1 66 80.3
Gohir.A03G217200 Gossypium hirsutum HOM05D000540 ORTHO05D008105 2.1e-21 106.3 83 62.7
MD02G1217700 Malus domestica HOM05D000540 ORTHO05D008105 2.1e-21 106.3 94 57.4
MD07G1100000 Malus domestica HOM05D000540 ORTHO05D008105 2.1e-21 106.3 94 57.4
Medtr7g106780 Medicago truncatula HOM05D000540 ORTHO05D008105 2.7e-21 105.9 78 62.8
C03p53300 Brassica napus HOM05D000540 ORTHO05D008105 4.6e-21 105.1 74 66.2
Sp7g05780 Schrenkiella parvula HOM05D000540 ORTHO05D008105 6.0e-21 104.8 77 66.2
Lj3g0015602 Lotus japonicus HOM05D000540 ORTHO05D008105 1.0e-20 104.0 72 65.3
Glyma.08G106800 Glycine max HOM05D000540 ORTHO05D008105 1.3e-20 103.6 72 63.9
Glyma.05G150000 Glycine max HOM05D000540 ORTHO05D008105 2.3e-20 102.8 72 63.9
Gohir.D02G238800 Gossypium hirsutum HOM05D000540 ORTHO05D008105 2.3e-20 102.8 83 61.4
Gorai.005G267300 Gossypium raimondii HOM05D000540 ORTHO05D008105 2.3e-20 102.8 83 61.4
Lalb_Chr10g0097221 Lupinus albus HOM05D000540 ORTHO05D008105 3.0e-20 102.4 75 64.0
Manes.07G029100 Manihot esculenta HOM05D000540 ORTHO05D008105 3.0e-20 102.4 83 63.9
Phvul.001G167500 Phaseolus vulgaris HOM05D000540 ORTHO05D008105 3.9e-20 102.1 72 63.9
VMungo1383G2423 Vigna mungo HOM05D001610 ORTHO05D001585 3.9e-20 102.1 72 63.9
Ca_09077_v3 Cicer arietinum L. HOM05D000540 ORTHO05D008105 8.7e-20 100.9 72 63.9
Ca_22805_v3 Cicer arietinum L. HOM05D000540 ORTHO05D008105 8.7e-20 100.9 72 63.9
TPR.G25660 Trifolium pratense HOM05D000540 ORTHO05D008105 1.5e-19 100.1 72 63.9
TPR.G34443 Trifolium pratense HOM05D000540 ORTHO05D008105 1.5e-19 100.1 72 63.9
Aa31LG8G10410 Aethionema arabicum HOM05D000540 ORTHO05D008105 1.9e-19 99.8 74 63.5
arahy.Tifrunner.gnm1.ann1.3CPC1Y Arachis hypogaea HOM05D000540 ORTHO05D008105 2.5e-19 99.4 88 55.7
arahy.Tifrunner.gnm1.ann1.WZXK6X Arachis hypogaea HOM05D000540 ORTHO05D008105 2.5e-19 99.4 88 55.7
Medtr5g085270 Medicago truncatula HOM05D000540 ORTHO05D008105 9.7e-19 97.4 72 62.5
Nitab4.5_0000334g0010 Nicotiana tabacum HOM05D000540 ORTHO05D008105 9.7e-19 97.4 146 44.5
ClCG00G000520 Citrullus lanatus HOM05D000540 ORTHO05D008105 9.0e-17 90.9 85 54.1
Potri.013G129600 Populus trichocarpa HOM05D000540 ORTHO05D008105 1.2e-16 90.5 83 55.4
Sabra13G0107600 Salix brachista HOM05D000540 ORTHO05D008105 1.2e-16 90.5 83 56.6
ClCG00G000530 Citrullus lanatus HOM05D000540 ORTHO05D008105 7.6e-16 87.8 79 59.5
Medtr8g466190 Medicago truncatula HOM05D000540 ORTHO05D008105 1.3e-15 87.0 66 66.7
SHI36701 Sapria himalayana HOM05D000540 ORTHO05D008105 2.9e-15 85.9 64 62.5
Mapoly0157s0025 Marchantia polymorpha HOM05D000540 ORTHO05D008105 5.0e-15 85.1 91 52.7
SHI31828 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI34991 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI35858 Sapria himalayana HOM05D000540 ORTHO05D008105 1.1e-14 84.0 54 70.4
SHI37858 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI37906 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI37965 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38052 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38194 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38471 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38513 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38589 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38605 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI38868 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI40568 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI41069 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI43265 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI43312 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI45733 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI50522 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI50600 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI53542 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-14 84.0 54 70.4
SHI51026 Sapria himalayana HOM05D000540 ORTHO05D000681 1.9e-14 83.2 54 68.5
SHI51272 Sapria himalayana HOM05D000540 ORTHO05D000681 2.5e-14 82.8 54 68.5
SHI38387 Sapria himalayana HOM05D000540 ORTHO05D000681 3.2e-14 82.4 55 67.3
SHI54942 Sapria himalayana HOM05D000540 ORTHO05D008105 3.2e-14 82.4 54 68.5
SHI37554 Sapria himalayana HOM05D000540 ORTHO05D008105 4.2e-14 82.0 62 61.3
SHI38983 Sapria himalayana HOM05D000540 ORTHO05D008105 5.5e-14 81.6 54 68.5
SHI27340 Sapria himalayana HOM05D000540 ORTHO05D000681 7.2e-14 81.3 54 68.5
SHI40340 Sapria himalayana HOM05D000540 ORTHO05D000681 1.6e-13 80.1 54 68.5
SHI54850 Sapria himalayana HOM05D000540 ORTHO05D008105 1.6e-13 80.1 54 66.7
AagrBONN_evm.TU.Sc2ySwM_117.3450 Anthoceros agrestis HOM05D000540 ORTHO05D008105 2.1e-13 79.7 74 55.4
ClCG11G008150 Citrullus lanatus HOM05D000540 ORTHO05D008105 3.6e-13 79.0 58 63.8
SHI49875 Sapria himalayana HOM05D000540 ORTHO05D000681 3.6e-13 79.0 54 64.8
SHI53038 Sapria himalayana HOM05D000540 ORTHO05D000681 3.6e-13 79.0 54 64.8
AagrBONN_evm.TU.Sc2ySwM_228.180 Anthoceros agrestis HOM05D000540 ORTHO05D008105 4.6e-13 78.6 74 54.1
SHI37326 Sapria himalayana HOM05D000540 ORTHO05D000681 1.8e-12 76.6 54 64.8
SHI44879 Sapria himalayana HOM05D000540 ORTHO05D008105 1.8e-12 76.6 51 68.6
SHI37000 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-12 75.9 54 63.0
Haze_26884 Corylus avellana HOM05D000540 ORTHO05D000681 5.1e-12 75.1 93 44.1
SHI37876 Sapria himalayana HOM05D000540 ORTHO05D000681 5.1e-12 75.1 54 66.7
SHI38050 Sapria himalayana HOM05D000540 ORTHO05D000681 5.1e-12 75.1 54 66.7
Pp3c3_35760 Physcomitrium patens HOM05D024141 ORTHO05D008105 3.3e-11 72.4 65 56.9
ClCG03G011250 Citrullus lanatus HOM05D000540 ORTHO05D000001 5.7e-11 71.6 46 73.9
Zm00001eb293400 Zea mays HOM05D042568 ORTHO05D008105 7.4e-11 71.2 52 61.5
BcaB03g14613 Brassica carinata HOM05D000142 ORTHO05D000124 1.3e-10 70.5 76 48.7
SHI48062 Sapria himalayana HOM05D000540 ORTHO05D000681 2.8e-10 69.3 57 54.4
SMO358G0711 Selaginella moellendorffii HOM05D000540 ORTHO05D008105 3.7e-10 68.9 105 41.9
SHI35194 Sapria himalayana HOM05D000540 ORTHO05D000681 1.4e-09 67.0 127 40.2
SHI41065 Sapria himalayana HOM05D000540 ORTHO05D000681 1.8e-09 66.6 47 63.8
CAN.G993.9 Capsicum annuum HOM05D003467 ORTHO05D008105 3.1e-09 65.9 38 78.9
Potri.019G101950 Populus trichocarpa HOM05D000540 ORTHO05D008105 5.3e-09 65.1 61 54.1
SHI34608 Sapria himalayana HOM05D000540 ORTHO05D000681 9.1e-09 64.3 42 71.4
SHI38319 Sapria himalayana HOM05D000540 ORTHO05D000681 1.5e-08 63.5 38 73.7
Peaxi162Scf00406g00134 Petunia axillaris HOM05D001223 ORTHO05D001058 1.3e-07 60.5 88 45.5
Mapoly0010s0113 Marchantia polymorpha HOM05D024141 ORTHO05D008105 1.7e-07 60.1 60 55.0
MBI05_g05349_MAGBIO Magnolia biondii HOM05D016544 ORTHO05D017245 2.2e-07 59.7 35 77.1
SHI40214 Sapria himalayana HOM05D000540 ORTHO05D000681 2.2e-07 59.7 52 57.7
Nitab4.5_0000351g0280 Nicotiana tabacum HOM05D000540 ORTHO05D008105 4.2e-06 55.5 45 64.4
Potri.011G074301 Populus trichocarpa HOM05D000540 ORTHO05D009557 9.4e-06 54.3 96 40.6


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