Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001153g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.3e-114 416.4 213 100.0
CAN.G547.11 Capsicum annuum HOM05D000545 ORTHO05D014546 1.6e-59 233.4 230 61.3
CAN.G761.6 Capsicum annuum HOM05D012364 ORTHO05D014546 2.8e-56 222.6 204 65.2
Nitab4.5_0005853g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 6.3e-48 194.9 195 60.0
Nitab4.5_0000844g0130 Nicotiana tabacum HOM05D012364 ORTHO05D014546 4.1e-47 192.2 229 52.4
CAN.G390.15 Capsicum annuum HOM05D012364 ORTHO05D014546 1.7e-40 170.2 178 57.9
PGSC0003DMG400021743 Solanum tuberosum HOM05D012364 ORTHO05D014546 1.4e-39 167.2 107 80.4
Nitab4.5_0001770g0030 Nicotiana tabacum HOM05D012364 ORTHO05D014546 4.1e-39 165.6 179 59.8
Solyc11g039970.1 Solanum lycopersicum HOM05D012364 ORTHO05D014546 1.2e-38 164.1 96 88.5
Nitab4.5_0012158g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.0e-34 151.0 127 66.1
Nitab4.5_0002739g0160 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.4e-34 150.6 94 78.7
Nitab4.5_0000172g0700 Nicotiana tabacum HOM05D012364 ORTHO05D014546 4.0e-34 149.1 130 63.8
Nitab4.5_0012158g0030 Nicotiana tabacum HOM05D012364 ORTHO05D014546 3.3e-20 102.8 68 77.9
Nitab4.5_0029518g0010 Nicotiana tabacum HOM05D012364 ORTHO05D283088 1.0e-13 81.3 49 85.7
Nitab4.5_0011806g0010 Nicotiana tabacum HOM05D012364 ORTHO05D014546 6.6e-13 78.6 40 95.0
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.8e-10 70.5 77 57.1
Nitab4.5_0001691g0010 Nicotiana tabacum HOM05D000506 ORTHO05D000369 3.4e-09 66.2 51 64.7
Peaxi162Scf00038g02414 Petunia axillaris HOM05D000506 ORTHO05D000369 1.7e-08 63.9 51 62.7
Cc04_g00480 Coffea canephora HOM05D000506 ORTHO05D000369 2.2e-08 63.5 49 67.3
PGSC0003DMG400009158 Solanum tuberosum HOM05D000506 ORTHO05D000369 2.9e-08 63.2 51 62.7
Solyc03g123820.2 Solanum lycopersicum HOM05D000506 ORTHO05D000369 6.4e-08 62.0 51 62.7
Sopen03g041570 Solanum pennellii HOM05D000506 ORTHO05D000369 6.4e-08 62.0 51 62.7
Nitab4.5_0002885g0010 Nicotiana tabacum HOM05D000506 ORTHO05D000369 1.1e-07 61.2 51 62.7
FvH4_6g37470 Fragaria vesca HOM05D000506 ORTHO05D000369 1.9e-07 60.5 51 58.8
FAN02G1359 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.9e-07 60.5 51 58.8
FAN05G2289 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.9e-07 60.5 51 58.8
FAN09G4079 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.9e-07 60.5 51 58.8
FAN14G4772 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.9e-07 60.5 51 58.8
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.4e-07 60.1 75 42.7
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 3.2e-07 59.7 75 42.7
Dinv20363 Davidia involucrata HOM05D000506 ORTHO05D000369 4.1e-07 59.3 51 58.8
PSO384G4937 Papaver somniferum HOM05D000002 ORTHO05D000001 4.1e-07 59.3 77 40.3
QL05p083196 Quercus lobata HOM05D000506 ORTHO05D000369 4.1e-07 59.3 51 58.8
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 5.4e-07 58.9 77 37.7
PSO761G0433 Papaver somniferum HOM05D000002 ORTHO05D000001 7.1e-07 58.5 75 40.0
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 9.2e-07 58.2 75 41.3
Cfa003446 Carpinus fangiana HOM05D000506 ORTHO05D000369 1.6e-06 57.4 51 52.9
TWI12G1323 Tripterygium wilfordii HOM05D000506 ORTHO05D000369 1.6e-06 57.4 49 61.2
PSO541G4865 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-06 57.0 102 36.3
Atru.chr1.2772 Acer truncatum HOM05D000506 ORTHO05D000369 2.7e-06 56.6 51 56.9
Ah.14g085750 Amaranthus hybridus HOM05D000506 ORTHO05D000369 2.7e-06 56.6 46 63.0
Manes.16G045700 Manihot esculenta HOM05D000506 ORTHO05D000369 2.7e-06 56.6 51 54.9
CAN.G790.41 Capsicum annuum HOM05D000506 ORTHO05D000369 3.5e-06 56.2 51 56.9
PSO135G0295 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-06 56.2 97 37.1
PSO170G6306 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-06 56.2 76 38.2
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.6e-06 55.8 86 41.9
Peaxi162Scf00031g00092 Petunia axillaris HOM05D011121 ORTHO05D018079 4.6e-06 55.8 82 32.9
TWI18G1329 Tripterygium wilfordii HOM05D000506 ORTHO05D000369 4.6e-06 55.8 49 59.2
Lsat_1_v5_gn_5_137541 Lactuca sativa HOM05D000506 ORTHO05D000369 6.0e-06 55.5 46 54.3
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 6.0e-06 55.5 77 39.0
Thecc.06G016600 Theobroma cacao HOM05D000506 ORTHO05D000369 6.0e-06 55.5 51 52.9
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.8e-06 55.1 94 39.4
Haze_16159 Corylus avellana HOM05D000506 ORTHO05D000369 7.8e-06 55.1 51 51.0
Prupe.3G168200 Prunus persica HOM05D000506 ORTHO05D000369 7.8e-06 55.1 51 52.9


User provided reference genes

Program Settings