Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-116 422.9 203 100.0
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.0e-64 248.1 168 73.8
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 1.3e-63 246.9 155 78.7
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.9e-50 202.6 172 62.8
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 8.4e-50 201.1 134 76.1
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.4e-50 201.1 134 76.1
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.7e-48 196.1 131 74.8
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 2.4e-44 183.0 95 90.5
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 4.0e-44 182.2 93 91.4
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 1.2e-43 180.6 93 91.4
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 9.9e-43 177.6 93 90.3
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 9.9e-43 177.6 93 90.3
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.1e-41 174.1 91 90.1
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.0e-40 168.3 126 69.8
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 1.3e-39 167.2 93 83.9
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 3.0e-39 166.0 93 81.7
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.1e-39 165.2 98 78.6
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 1.5e-38 163.7 93 83.9
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 9.6e-38 161.0 93 87.1
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.1e-37 159.8 114 72.8
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 4.8e-37 158.7 84 89.3
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 1.8e-36 156.8 94 80.9
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 4.5e-35 152.1 84 81.0
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 4.6e-32 142.1 83 86.7
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.8e-31 140.2 118 65.3
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.7e-31 137.9 132 57.6
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 9.6e-30 134.4 73 89.0
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 9.0e-28 127.9 70 88.6
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 3.4e-27 125.9 119 59.7
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 6.5e-26 121.7 88 72.7
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 1.4e-25 120.6 71 85.9
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.4e-25 120.6 71 85.9
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.9e-25 120.2 112 61.6
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-24 117.5 62 88.7
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 1.6e-24 117.1 62 88.7
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 3.5e-24 115.9 60 90.0
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 6.1e-24 115.2 60 90.0
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 6.1e-24 115.2 60 90.0
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.1e-24 115.2 60 90.0
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 6.1e-24 115.2 60 90.0
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 6.1e-24 115.2 60 90.0
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 6.1e-24 115.2 60 90.0
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 7.9e-24 114.8 61 88.5
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 1.0e-23 114.4 88 69.3
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 1.3e-23 114.0 62 87.1
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.8e-23 113.6 60 90.0
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 1.8e-23 113.6 60 88.3
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-23 113.6 112 58.0
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-23 113.6 62 85.5
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 5.1e-23 112.1 60 88.3
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 5.1e-23 112.1 60 88.3
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 5.1e-23 112.1 57 91.2
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 6.7e-23 111.7 60 88.3
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 8.7e-23 111.3 60 88.3
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 1.9e-22 110.2 62 85.5
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 1.9e-22 110.2 62 85.5
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 1.9e-22 110.2 62 85.5
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 1.9e-22 110.2 60 86.7
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.9e-22 110.2 60 86.7
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 1.9e-22 110.2 60 86.7
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 3.3e-22 109.4 60 85.0
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 4.3e-22 109.0 60 86.7
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 4.3e-22 109.0 60 86.7
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 7.4e-22 108.2 60 86.7
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 7.4e-22 108.2 60 86.7
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 7.4e-22 108.2 60 86.7
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 9.7e-22 107.8 60 86.7
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 6.3e-21 105.1 62 82.3
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 6.3e-21 105.1 62 82.3
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 8.2e-21 104.8 79 68.4
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 1.4e-20 104.0 55 87.3
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 3.4e-19 99.4 79 65.8
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 4.5e-19 99.0 81 64.2
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 5.9e-19 98.6 99 52.5
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.0e-18 97.8 81 64.2
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.0e-18 97.8 81 64.2
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.0e-18 97.8 81 64.2
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.0e-18 97.8 81 64.2
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.0e-18 97.8 81 64.2
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 2.9e-18 96.3 74 64.9
CSS0002325 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 3.8e-18 95.9 90 57.8
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 5.0e-18 95.5 51 88.2
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 5.0e-18 95.5 54 81.5
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.2e-16 90.9 56 75.0
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-16 90.1 49 89.8
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 3.6e-16 89.4 49 85.7
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 6.1e-16 88.6 51 80.4
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.8e-15 87.0 51 76.5
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 8.8e-15 84.7 44 88.6
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 2.5e-14 83.2 43 86.0
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.5e-14 83.2 63 68.3
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 1.7e-13 80.5 51 70.6
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.2e-13 80.1 119 45.4
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 2.8e-13 79.7 51 68.6
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 3.7e-13 79.3 51 64.7
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 4.8e-13 79.0 59 62.7
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 6.3e-13 78.6 41 87.8
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.2e-13 78.2 112 47.3
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-12 77.0 42 85.7
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.1e-12 75.9 110 42.7
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 5.3e-12 75.5 51 64.7
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.1e-12 74.7 41 82.9
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 4.5e-11 72.4 52 63.5
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 5.9e-11 72.0 41 85.4
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 3.8e-10 69.3 51 64.7
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 6.5e-10 68.6 35 88.6
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.2e-09 66.2 91 44.0
Oeu014139.1 Olea europaea HOM05D000533 ORTHO05D007817 2.1e-08 63.5 44 72.7
ClCG05G017710 Citrullus lanatus HOM05D023369 ORTHO05D025092 3.6e-08 62.8 36 86.1
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 1.1e-06 57.8 30 83.3
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 2.0e-06 57.0 43 62.8


User provided reference genes

Program Settings