Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001152g0410 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.4e-83 311.6 157 100.0
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.5e-54 216.5 146 78.1
HanXRQChr11g0335401 Helianthus annuus HOM05D003430 ORTHO05D004809 6.3e-53 211.1 157 72.6
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 2.1e-48 196.1 106 93.4
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.1e-48 194.5 106 92.5
Sopen00g002720 Solanum pennellii HOM05D003430 ORTHO05D004809 6.1e-48 194.5 106 92.5
Lj2C1222G56 Lonicera japonica HOM05D003430 ORTHO05D004809 3.3e-46 188.7 106 91.5
Lj2C1222G64 Lonicera japonica HOM05D003430 ORTHO05D004809 3.3e-46 188.7 106 91.5
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 4.4e-46 188.3 106 90.6
Peaxi162Scf00456g00035 Petunia axillaris HOM05D003430 ORTHO05D004809 4.4e-46 188.3 106 88.7
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 9.7e-46 187.2 106 90.6
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 1.3e-45 186.8 106 90.6
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 3.1e-44 182.2 106 88.7
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 3.1e-44 182.2 106 88.7
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 3.1e-44 182.2 106 88.7
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 3.1e-44 182.2 106 88.7
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 5.3e-44 181.4 106 88.7
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 9.1e-44 180.6 106 87.7
arahy.Tifrunner.gnm1.ann1.0UJ9QK Arachis hypogaea HOM05D003430 ORTHO05D004809 7.7e-43 177.6 134 73.1
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 7.7e-43 177.6 106 87.7
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 1.3e-42 176.8 106 86.8
Lalb_Chr00c39g0409071 Lupinus albus HOM05D003430 ORTHO05D004809 1.3e-42 176.8 106 86.8
Lalb_Chr00c39g0409251 Lupinus albus HOM05D003430 ORTHO05D004809 1.3e-42 176.8 106 86.8
Lalb_Chr00c51g0413171 Lupinus albus HOM05D003430 ORTHO05D004809 1.3e-42 176.8 106 86.8
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 2.9e-42 175.6 116 79.3
Lalb_Chr10g0094601 Lupinus albus HOM05D003430 ORTHO05D004809 8.5e-42 174.1 106 84.9
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 1.1e-41 173.7 106 85.8
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 1.1e-41 173.7 106 85.8
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 1.1e-41 173.7 106 85.8
arahy.Tifrunner.gnm1.ann1.41QMJ9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.4e-41 173.3 106 84.9
arahy.Tifrunner.gnm1.ann1.AJMC4E Arachis hypogaea HOM05D003430 ORTHO05D004809 1.4e-41 173.3 106 84.9
BolSC28t60411H Brassica oleracea HOM05D003430 ORTHO05D004809 3.2e-41 172.2 106 84.9
Sabra12G0092700 Salix brachista HOM05D003430 ORTHO05D004809 5.5e-41 171.4 106 84.0
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 5.5e-41 171.4 106 84.0
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 9.4e-41 170.6 106 84.9
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 9.4e-41 170.6 106 84.9
CDE02G0363 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 1.2e-40 170.2 106 83.0
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.6e-40 169.9 106 84.9
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 6.1e-40 167.9 109 83.5
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 1.0e-39 167.2 106 82.1
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 1.0e-39 167.2 106 82.1
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 1.8e-39 166.4 106 80.2
SHI29634 Sapria himalayana HOM05D003430 ORTHO05D004809 1.8e-39 166.4 106 82.1
Zm00001eb435500 Zea mays HOM05D003430 ORTHO05D004809 2.0e-38 162.9 106 83.0
Zm00001eb436090 Zea mays HOM05D003430 ORTHO05D004809 2.0e-38 162.9 106 83.0
Zm00001eb437350 Zea mays HOM05D003430 ORTHO05D004809 2.0e-38 162.9 106 83.0
Zm00001eb440330 Zea mays HOM05D003430 ORTHO05D004809 2.0e-38 162.9 106 83.0
Zm00001eb440360 Zea mays HOM05D003430 ORTHO05D004809 2.0e-38 162.9 106 83.0
Zm00001eb442170 Zea mays HOM05D003430 ORTHO05D004809 2.0e-38 162.9 106 83.0
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 4.4e-38 161.8 93 89.2
Lsat_1_v5_gn_5_16620 Lactuca sativa HOM05D003430 ORTHO05D004809 5.7e-38 161.4 106 80.2
SalBow1G3892 Salvia bowleyana HOM05D003430 ORTHO05D004809 7.4e-38 161.0 93 89.2
unitig_87.g27925 Utricularia gibba HOM05D003430 ORTHO05D004809 7.4e-38 161.0 106 81.1
PGSC0003DMG400037371 Solanum tuberosum HOM05D003430 ORTHO05D004809 1.3e-37 160.2 95 87.4
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 4.8e-37 158.3 106 79.2
Nn1g10089 Nelumbo nucifera HOM05D003430 ORTHO05D004809 4.8e-37 158.3 92 88.0
AT2G07815 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 8.2e-37 157.5 157 58.6
BraSC54t46375Z Brassica rapa HOM05D003430 ORTHO05D004809 8.2e-37 157.5 157 58.6
BraSC77t46627Z Brassica rapa HOM05D003430 ORTHO05D004809 8.2e-37 157.5 157 58.6
Psat3g040120 Pisum sativum HOM05D003430 ORTHO05D004809 1.4e-36 156.8 93 87.1
Sopen11g022460 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-36 156.8 85 92.9
Lsat_1_v5_gn_6_109000 Lactuca sativa HOM05D003430 ORTHO05D004809 2.0e-35 152.9 127 64.6
SHI33655 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-34 149.8 173 56.1
Gohir.D01G117000 Gossypium hirsutum HOM05D003430 ORTHO05D004809 2.2e-34 149.4 96 81.2
Hma1.2p1_1286F.1_g273040 Hydrangea macrophylla HOM05D003430 ORTHO05D004809 2.9e-34 149.1 84 90.5
Lj2C1231G44 Lonicera japonica HOM05D003430 ORTHO05D004809 2.9e-34 149.1 89 86.5
AUR62042332 Chenopodium quinoa HOM05D003430 ORTHO05D004809 6.5e-34 147.9 93 83.9
EL10Ac3g07005 Beta vulgaris HOM05D003430 ORTHO05D004809 8.5e-34 147.5 93 83.9
Sc11g0004420 Simmondsia chinensis HOM05D003430 ORTHO05D004809 8.5e-34 147.5 93 82.8
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 2.5e-33 146.0 93 82.8
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 7.2e-33 144.4 93 82.8
BolC1t03462H Brassica oleracea HOM05D003430 ORTHO05D004809 1.2e-32 143.7 97 76.3
VMungo0044G0002 Vigna mungo HOM05D003430 ORTHO05D004809 2.1e-32 142.9 85 87.1
Aqoxy4G00518 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 4.0e-31 138.7 93 78.5
arahy.Tifrunner.gnm1.ann1.ABQ8F7 Arachis hypogaea HOM05D003430 ORTHO05D004809 9.7e-30 134.0 85 82.4
arahy.Tifrunner.gnm1.ann1.CY2VCK Arachis hypogaea HOM05D003430 ORTHO05D004809 9.7e-30 134.0 85 82.4
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 1.2e-27 127.1 80 82.5
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.5e-25 118.2 74 79.7
Sp3g25650 Schrenkiella parvula HOM05D003430 ORTHO05D004809 4.7e-24 115.2 73 82.2
Medtr8g091515 Medicago truncatula HOM05D003430 ORTHO05D004809 1.4e-23 113.6 65 87.7
arahy.Tifrunner.gnm1.ann1.087TPC Arachis hypogaea HOM05D003430 ORTHO05D004809 6.8e-23 111.3 109 60.6
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 7.5e-22 107.8 106 59.4
Nitab4.5_0000172g0240 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.7e-21 106.7 63 82.5
Nn044s41806 Nelumbo nucifera HOM05D003430 ORTHO05D004809 1.8e-20 103.2 59 88.1
GSVIVG01031933001 Vitis vinifera HOM05D003430 ORTHO05D004809 1.1e-17 94.0 69 66.7
Nitab4.5_0000172g0960 Nicotiana tabacum HOM05D003430 ORTHO05D004809 7.2e-17 91.3 112 50.0
SHI20516 Sapria himalayana HOM05D003430 ORTHO05D004809 8.9e-15 84.3 105 51.4
SHI32117 Sapria himalayana HOM05D003430 ORTHO05D004809 1.8e-12 76.6 67 62.7
TPR.G457 Trifolium pratense HOM05D003430 ORTHO05D004809 4.1e-12 75.5 48 83.3
Ciclev10017542m.g Citrus clementina HOM05D003430 ORTHO05D004809 9.2e-12 74.3 46 78.3
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 2.0e-11 73.2 44 86.4
Solyc00g500167.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 2.0e-11 73.2 36 94.4
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.0e-10 68.6 106 43.4
Medtr5g068830 Medicago truncatula HOM05D003430 ORTHO05D004809 1.9e-09 66.6 55 69.1
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 3.3e-09 65.9 44 77.3
Nn2g14911 Nelumbo nucifera HOM05D003430 ORTHO05D004809 9.5e-09 64.3 37 86.5
Medtr0024s0140 Medicago truncatula HOM05D003430 ORTHO05D004809 8.0e-08 61.2 38 81.6


User provided reference genes

Program Settings