Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001152g0280 Nicotiana tabacum HOM05D008204 ORTHO05D016167 3.4e-124 448.4 230 100.0
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 8.6e-59 231.1 249 59.4
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.8e-56 223.4 249 57.8
Nitab4.5_0001761g0060 Nicotiana tabacum HOM05D016096 ORTHO05D016167 5.2e-40 168.7 175 59.4
Nitab4.5_0000172g2040 Nicotiana tabacum HOM05D008204 ORTHO05D283758 3.9e-35 152.5 131 66.4
Nitab4.5_0000416g0020 Nicotiana tabacum HOM05D000452 ORTHO05D000647 1.2e-33 147.5 101 79.2
Nitab4.5_0000172g1750 Nicotiana tabacum HOM05D008204 ORTHO05D016167 1.3e-30 137.5 89 83.1
Lj2C1236T50 Lonicera japonica HOM05D000743 ORTHO05D000580 3.0e-27 126.3 145 49.7
Nitab4.5_0000172g1920 Nicotiana tabacum HOM05D008204 ORTHO05D286879 2.8e-17 93.2 63 74.6
Nitab4.5_0000119g0190 Nicotiana tabacum HOM05D000553 ORTHO05D000460 6.4e-14 82.0 44 90.9
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 6.0e-12 75.5 72 62.5
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 3.9e-11 72.8 83 57.8
SHI41393 Sapria himalayana HOM05D008204 ORTHO05D010378 6.9e-08 62.0 37 83.8
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.6e-07 60.1 176 33.5
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 3.4e-07 59.7 37 83.8
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Lsat_1_v5_gn_5_43061 Lactuca sativa HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 3.4e-07 59.7 37 83.8
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 3.4e-07 59.7 37 83.8
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 3.4e-07 59.7 37 83.8
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
SHI54418 Sapria himalayana HOM05D008204 ORTHO05D010378 3.4e-07 59.7 37 83.8
HanXRQChr11g0327851 Helianthus annuus HOM05D008204 ORTHO05D010378 7.6e-07 58.5 44 70.5
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 1.0e-06 58.2 37 81.1
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.0e-06 58.2 45 66.7
Aa31csc1168G40 Aethionema arabicum HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.7e-06 57.4 37 81.1
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 1.7e-06 57.4 37 81.1
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.9e-06 56.6 37 81.1
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 2.9e-06 56.6 37 81.1
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 2.9e-06 56.6 37 75.7
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
HanXRQChr07g0189011 Helianthus annuus HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 78.4
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.9e-06 56.6 37 81.1
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 2.9e-06 56.6 37 81.1
SHI07475 Sapria himalayana HOM05D008204 ORTHO05D010378 4.9e-06 55.8 32 87.5
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 6.4e-06 55.5 37 78.4
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 8.4e-06 55.1 37 78.4


User provided reference genes

Program Settings