Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 1.4e-259 899.0 444 100.0
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 4.9e-228 794.3 442 90.3
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 7.8e-226 786.9 442 86.4
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 2.5e-224 781.9 442 87.1
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 5.6e-224 780.8 441 86.8
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 3.0e-209 731.9 441 80.5
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 4.3e-208 728.0 442 79.4
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 4.3e-208 728.0 442 80.5
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 2.8e-207 725.3 442 78.7
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 1.2e-205 719.9 442 78.5
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 5.8e-205 717.6 442 78.5
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 8.4e-204 713.8 442 78.3
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 9.3e-203 710.3 442 77.6
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 3.5e-202 708.4 442 76.9
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 1.3e-201 706.4 442 77.8
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 3.9e-201 704.9 442 77.4
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 5.1e-201 704.5 442 76.7
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 6.7e-201 704.1 442 77.8
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 6.7e-201 704.1 442 77.1
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 1.1e-200 703.4 443 75.8
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 2.5e-200 702.2 442 77.4
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 2.5e-200 702.2 442 76.2
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 5.6e-200 701.0 404 80.7
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 4.8e-199 698.0 404 79.7
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 4.0e-198 694.9 440 75.9
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 9.0e-198 693.7 442 76.5
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 2.6e-197 692.2 442 75.6
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 5.8e-197 691.0 442 74.7
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 7.6e-197 690.6 441 75.1
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 1.0e-196 690.3 442 76.2
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 1.0e-196 690.3 442 75.8
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 1.3e-196 689.9 442 75.8
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 2.2e-196 689.1 442 74.0
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 4.9e-196 688.0 442 74.7
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 6.5e-196 687.6 442 74.9
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 8.4e-196 687.2 440 74.3
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 8.4e-196 687.2 442 76.0
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 1.1e-195 686.8 444 74.5
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 1.4e-195 686.4 440 73.6
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 4.2e-195 684.9 441 74.1
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 5.5e-195 684.5 406 78.6
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 2.1e-194 682.6 441 73.9
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 4.6e-194 681.4 406 77.8
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 4.6e-194 681.4 442 73.3
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 6.0e-194 681.0 404 78.0
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 7.9e-194 680.6 441 73.5
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 1.3e-193 679.9 442 74.2
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 2.3e-193 679.1 441 73.9
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 3.9e-193 678.3 442 74.4
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 5.1e-193 677.9 406 77.3
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 5.1e-193 677.9 416 76.4
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 1.1e-192 676.8 442 75.3
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 1.9e-192 676.0 440 73.9
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 3.3e-192 675.2 441 73.7
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 5.7e-192 674.5 442 72.6
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 7.4e-192 674.1 442 74.9
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 2.2e-191 672.5 442 73.5
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 2.2e-191 672.5 401 77.6
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 2.8e-191 672.2 442 73.8
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 4.8e-191 671.4 442 73.5
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 6.3e-191 671.0 442 73.5
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 6.3e-191 671.0 442 73.3
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 1.4e-190 669.8 442 72.2
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 1.8e-190 669.5 442 73.3
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 2.4e-190 669.1 459 71.2
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 3.1e-190 668.7 442 73.3
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 3.1e-190 668.7 442 73.3
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 3.1e-190 668.7 406 75.6
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 3.1e-190 668.7 442 73.1
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 3.4e-189 665.2 442 72.6
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 7.7e-189 664.1 441 73.0
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 1.3e-188 663.3 381 86.9
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 5.0e-188 661.4 406 74.9
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 5.0e-188 661.4 472 69.7
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 1.1e-187 660.2 401 76.1
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 2.5e-187 659.1 448 71.4
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 4.2e-187 658.3 452 71.5
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 1.6e-186 656.4 442 70.1
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 3.6e-186 655.2 442 71.0
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 1.0e-185 653.7 442 70.8
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 3.0e-185 652.1 442 71.0
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 5.1e-185 651.4 376 81.4
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 3.3e-184 648.7 442 72.4
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 1.4e-182 643.3 456 70.4
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 1.4e-182 643.3 442 70.4
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 6.9e-182 641.0 452 70.1
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 5.9e-181 637.9 406 72.7
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 6.7e-177 624.4 452 69.2
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 2.0e-176 622.9 404 71.5
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 1.5e-173 613.2 419 70.2
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 7.7e-173 610.9 442 68.1
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 3.8e-172 608.6 404 70.0
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 2.1e-170 602.8 490 63.3
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 3.5e-165 585.5 439 63.8
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 1.3e-164 583.6 451 66.7
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 2.9e-164 582.4 444 62.4
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 4.2e-163 578.6 451 64.5
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 1.4e-161 573.5 386 72.8
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 6.7e-161 571.2 415 67.2
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 1.7e-159 566.6 375 71.7
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 2.4e-158 562.8 504 58.1
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 1.6e-157 560.1 484 58.1
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 2.4e-150 536.2 442 62.2
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 1.2e-144 517.3 402 61.4
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 1.2e-144 517.3 402 59.2
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 8.3e-143 511.1 404 59.7
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 2.4e-142 509.6 401 59.4
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 1.7e-140 503.4 442 58.4
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 5.0e-140 501.9 429 56.2
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 8.6e-140 501.1 469 55.0
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 1.5e-139 500.4 442 57.7
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 1.6e-125 453.8 408 53.7
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 4.9e-119 432.2 390 54.1
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 3.0e-116 422.9 251 78.5
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 3.6e-114 416.0 243 77.8
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 6.6e-108 395.2 265 79.2
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 5.4e-102 375.6 265 70.6
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 4.0e-97 359.4 372 45.7
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 1.9e-91 340.5 432 41.2
Ciclev10012767m.g Citrus clementina HOM05D004472 ORTHO05D007169 3.1e-89 333.2 178 83.7
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 2.0e-88 330.5 261 62.8
Hma1.2p1_0386F.1_g141870 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 7.6e-88 328.6 176 84.7
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 3.2e-86 323.2 488 37.3
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 2.0e-64 250.8 164 73.8
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 7.9e-61 238.8 199 60.8
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 3.1e-49 200.3 169 55.6
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 4.1e-49 199.9 419 31.3
Lsat_1_v5_gn_5_163500 Lactuca sativa HOM05D004472 ORTHO05D007169 7.0e-49 199.1 184 54.9
BcaNung06765 Brassica carinata HOM05D004472 ORTHO05D027254 2.3e-44 184.1 145 60.0
BcaC04g21709 Brassica carinata HOM05D004472 ORTHO05D013781 3.4e-43 180.3 152 58.6
BcaC03g16493 Brassica carinata HOM05D004472 ORTHO05D013781 6.3e-42 176.0 185 49.7
BcaNung04407 Brassica carinata HOM05D004472 ORTHO05D007169 1.4e-41 174.9 225 43.1
A02p27200 Brassica napus HOM05D004472 ORTHO05D013781 9.1e-41 172.2 108 67.6
Peaxi162Scf00258g00729 Petunia axillaris HOM05D004472 ORTHO05D007169 2.7e-37 160.6 75 93.3
SEGI_39608 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 4.0e-36 156.8 132 53.8
BcaB02g11100 Brassica carinata HOM05D004472 ORTHO05D027254 6.3e-34 149.4 142 53.5
BolC9t55720H Brassica oleracea HOM05D004472 ORTHO05D013781 1.6e-32 144.8 96 67.7
A09p46770 Brassica napus HOM05D004472 ORTHO05D013781 1.7e-31 141.4 86 70.9
BcaC01g04270 Brassica carinata HOM05D004472 ORTHO05D013781 3.3e-30 137.1 125 55.2
BcaC02g12460 Brassica carinata HOM05D004472 ORTHO05D013781 2.6e-27 127.5 129 53.5
BcaNung00145 Brassica carinata HOM05D004472 ORTHO05D013781 8.3e-26 122.5 126 50.8
BcaC05g24672 Brassica carinata HOM05D004472 ORTHO05D027254 1.7e-23 114.8 126 48.4
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 2.1e-21 107.8 96 55.2
C03p43020 Brassica napus HOM05D004472 ORTHO05D013781 2.4e-17 94.4 66 65.2
CARHR228030 Cardamine hirsuta HOM05D004472 ORTHO05D039758 7.0e-17 92.8 67 71.6
BcaB02g11125 Brassica carinata HOM05D004472 ORTHO05D039758 4.3e-14 83.6 65 66.2
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 7.3e-14 82.8 66 63.6
SMO364G0765 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 1.7e-10 71.6 43 74.4
BcaB06g25539 Brassica carinata HOM05D004472 ORTHO05D094557 2.2e-10 71.2 82 46.3
BolC3t16570H Brassica oleracea HOM05D004472 ORTHO05D013781 1.2e-08 65.5 55 56.4
BraA07t27940Z Brassica rapa HOM05D004472 ORTHO05D013781 1.2e-08 65.5 55 56.4
BraA06t25637Z Brassica rapa HOM05D004472 ORTHO05D013781 3.5e-08 63.9 53 56.6
BraA08t32859Z Brassica rapa HOM05D004472 ORTHO05D027254 3.5e-08 63.9 47 63.8
CARHR241940 Cardamine hirsuta HOM05D004472 ORTHO05D007169 4.6e-08 63.5 38 73.7


User provided reference genes

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