Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-190 669.8 335 100.0
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 4.6e-178 627.9 351 90.9
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 9.0e-158 560.5 357 79.8
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.6e-146 523.1 355 73.8
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 4.6e-146 521.5 356 73.3
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 1.0e-145 520.4 353 72.5
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 2.3e-145 519.2 356 71.6
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.9e-144 516.2 356 71.6
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 4.1e-142 508.4 357 71.1
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 4.5e-141 505.0 353 69.7
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 5.9e-141 504.6 361 69.5
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.3e-140 503.4 351 70.7
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 2.2e-140 502.7 355 71.5
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 2.9e-140 502.3 357 69.7
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 2.9e-140 502.3 351 69.5
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 5.0e-140 501.5 353 71.1
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.0e-140 501.5 351 69.5
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 8.5e-140 500.7 355 67.6
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 2.5e-139 499.2 351 68.9
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 5.5e-139 498.0 352 69.0
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 7.2e-139 497.7 351 68.4
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.2e-139 497.7 351 68.4
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 7.2e-139 497.7 365 67.7
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 7.2e-139 497.7 351 69.5
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 9.3e-139 497.3 351 69.8
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.2e-138 496.9 351 69.8
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.2e-138 496.9 351 69.5
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 3.6e-138 495.4 353 67.4
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 3.6e-138 495.4 353 68.3
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 4.6e-138 495.0 352 69.6
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.6e-138 495.0 355 69.0
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 4.6e-138 495.0 355 69.0
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 6.1e-138 494.6 355 69.6
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 7.9e-138 494.2 357 69.2
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.3e-137 492.7 358 69.0
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.0e-137 492.3 353 68.3
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 3.9e-137 491.9 351 68.1
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 5.1e-137 491.5 363 66.7
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 5.1e-137 491.5 351 67.5
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.7e-137 491.1 355 67.6
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.9e-136 489.6 361 66.2
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.9e-136 489.6 361 66.2
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.9e-136 489.6 351 66.7
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.9e-136 489.6 351 69.5
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 7.4e-136 487.6 352 68.5
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 9.7e-136 487.3 355 66.8
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 9.7e-136 487.3 351 67.0
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.3e-135 486.9 355 67.0
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-135 486.9 360 66.7
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.6e-135 486.5 353 68.3
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 2.2e-135 486.1 351 68.9
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 3.7e-135 485.3 355 67.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 3.7e-135 485.3 360 64.7
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.8e-135 485.0 351 67.5
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.1e-134 483.8 353 67.1
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.1e-134 483.8 351 67.0
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.1e-134 483.8 353 66.3
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 1.4e-134 483.4 351 67.2
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.4e-134 482.6 344 71.5
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 3.1e-134 482.3 352 66.8
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.1e-134 482.3 351 66.1
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 5.3e-134 481.5 352 67.0
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 6.9e-134 481.1 359 64.9
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 6.9e-134 481.1 352 65.3
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 6.9e-134 481.1 365 65.8
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 9.1e-134 480.7 351 65.5
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.2e-133 480.3 352 68.5
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.2e-133 480.3 351 65.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.5e-133 479.9 355 65.6
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 2.0e-133 479.6 358 65.4
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.6e-133 479.2 360 64.7
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.6e-133 479.2 351 65.5
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 2.6e-133 479.2 357 66.4
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.6e-133 479.2 351 70.4
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 2.6e-133 479.2 362 64.1
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 4.5e-133 478.4 352 66.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 4.5e-133 478.4 351 65.5
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 7.7e-133 477.6 354 65.5
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-132 475.7 352 66.8
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 3.8e-132 475.3 363 64.5
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 8.5e-132 474.2 364 65.7
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 1.4e-131 473.4 351 66.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.5e-131 472.6 351 67.0
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 2.5e-131 472.6 351 63.8
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.2e-131 472.2 351 65.0
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 7.2e-131 471.1 345 66.4
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 1.2e-130 470.3 359 65.2
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 1.2e-130 470.3 354 64.4
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.1e-130 469.5 355 63.7
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.1e-130 469.5 356 64.9
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 6.1e-130 468.0 355 65.1
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.0e-129 467.2 360 63.6
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.8e-129 466.5 361 63.4
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.3e-129 466.1 360 63.6
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.0e-129 465.7 352 63.6
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 3.9e-129 465.3 353 64.6
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 6.7e-129 464.5 398 60.1
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 6.7e-129 464.5 355 64.2
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.6e-128 462.6 356 64.0
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 2.6e-128 462.6 356 64.9
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.4e-128 461.8 351 64.1
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 4.4e-128 461.8 358 65.6
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 4.4e-128 461.8 351 65.0
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 9.7e-128 460.7 358 64.8
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.3e-127 460.3 355 64.2
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.7e-127 459.9 359 64.6
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.2e-127 459.5 351 63.5
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 2.8e-127 459.1 352 63.1
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 5.3e-126 454.9 351 63.8
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.5e-125 453.4 353 64.9
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.2e-124 449.5 351 63.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 8.5e-124 447.6 351 62.7
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.5e-123 446.0 352 61.4
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.7e-122 442.6 353 62.6
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 3.6e-122 442.2 351 61.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 6.1e-122 441.4 337 64.7
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.4e-121 440.3 352 63.1
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.8e-121 439.9 353 62.3
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 8.8e-121 437.6 364 59.9
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 2.0e-120 436.4 355 63.1
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 2.8e-119 432.6 334 62.9
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.4e-118 430.3 361 60.1
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 1.0e-116 424.1 356 59.0
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.7e-116 423.3 352 61.1
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 1.1e-115 420.6 359 59.1
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.3e-113 412.9 353 57.2
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 5.2e-113 411.8 351 56.4
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.0e-112 409.8 354 56.8
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 2.0e-109 399.8 352 56.2
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.5e-104 383.6 301 62.1
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 7.5e-104 381.3 279 66.3
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 5.4e-102 375.2 335 58.8
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 9.1e-102 374.4 288 64.9
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 4.1e-94 349.0 279 62.0
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 5.6e-91 338.6 327 55.4
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 4.0e-89 332.4 353 52.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.4e-86 323.2 275 62.2
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.2e-69 267.7 272 50.0
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.6e-68 261.9 213 65.3
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.1e-62 241.9 156 70.5
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 4.6e-61 239.2 352 38.9
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 1.8e-57 227.3 352 39.5
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 2.0e-56 223.8 242 52.5
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.5e-51 206.8 175 64.0
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 5.8e-48 195.7 356 34.0
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.1e-41 173.3 145 60.7
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.3e-41 172.6 121 67.8
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 4.5e-40 169.5 114 72.8
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.7e-34 149.8 85 76.5
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 3.7e-34 149.8 163 49.7
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.2e-34 148.7 85 76.5
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-33 147.5 85 75.3
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.0e-31 141.7 85 72.9
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 3.5e-29 133.3 138 48.6
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 1.0e-23 115.2 117 52.1
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.6e-21 107.8 58 86.2
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 2.7e-21 107.1 58 84.5
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 2.7e-21 107.1 58 84.5
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 7.9e-21 105.5 172 39.5
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-20 104.8 59 81.4
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.5e-19 101.3 133 47.4
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.7e-18 97.8 106 50.9
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-17 94.7 59 72.9
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 3.1e-17 93.6 55 76.4
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 3.1e-17 93.6 143 36.4
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 5.3e-17 92.8 75 58.7
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.2e-16 91.7 58 72.4
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 4.5e-16 89.7 70 64.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.5e-14 84.0 80 53.8
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 4.2e-14 83.2 149 32.9
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.2e-14 83.2 40 82.5
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.0e-12 78.6 82 53.7
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 3.3e-11 73.6 55 61.8
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 1.7e-10 71.2 96 50.0
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 3.7e-10 70.1 64 46.9
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.6e-08 63.9 50 56.0
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.9e-06 57.8 76 47.4
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 7.2e-06 55.8 115 35.7


User provided reference genes

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