Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 9.0e-270 932.9 453 100.0
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 1.2e-205 719.9 468 79.7
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.2e-200 703.4 585 65.6
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 1.1e-198 696.8 455 79.1
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 3.1e-193 678.7 464 76.1
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 5.6e-187 657.9 585 62.4
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 5.8e-184 647.9 558 63.8
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 4.9e-183 644.8 523 66.0
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 9.0e-177 624.0 468 70.5
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 4.4e-176 621.7 629 57.4
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 9.9e-176 620.5 449 73.1
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 3.5e-173 612.1 455 71.9
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 3.5e-173 612.1 455 71.9
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 7.8e-173 610.9 455 71.6
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 8.7e-172 607.4 455 71.4
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 8.7e-172 607.4 455 71.4
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 3.3e-171 605.5 447 71.8
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 1.6e-170 603.2 472 69.9
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 2.8e-170 602.4 526 63.1
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 3.1e-169 599.0 451 71.4
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 2.9e-167 592.4 468 67.3
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.2e-166 588.6 405 75.8
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 8.7e-164 580.9 451 68.7
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 5.6e-163 578.2 441 71.2
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.7e-159 566.6 397 74.1
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 4.9e-159 565.1 552 57.4
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 4.8e-146 521.9 456 62.9
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 1.2e-144 517.3 428 65.0
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 4.5e-136 488.8 409 66.0
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 5.3e-129 465.3 456 58.3
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.0e-127 461.1 551 50.6
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 8.8e-124 448.0 397 63.0
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 2.8e-122 443.0 468 55.6
Sopen00g002720 Solanum pennellii HOM05D003430 ORTHO05D004809 3.0e-116 422.9 278 79.5
Peaxi162Scf00456g00035 Petunia axillaris HOM05D003430 ORTHO05D004809 8.2e-114 414.8 278 78.8
PGSC0003DMG400037371 Solanum tuberosum HOM05D003430 ORTHO05D004809 1.2e-112 411.0 277 78.3
Sopen11g022460 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-112 408.7 264 80.7
Lj2C1222G64 Lonicera japonica HOM05D003430 ORTHO05D004809 4.2e-110 402.5 278 76.6
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 1.2e-109 401.0 577 46.6
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 2.2e-106 390.2 459 51.0
Nn1g10089 Nelumbo nucifera HOM05D003430 ORTHO05D004809 2.2e-106 390.2 278 74.5
SalBow1G3892 Salvia bowleyana HOM05D003430 ORTHO05D004809 1.1e-105 387.9 276 75.7
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 9.1e-105 384.8 446 51.8
Sc11g0004420 Simmondsia chinensis HOM05D003430 ORTHO05D004809 1.7e-103 380.6 261 76.6
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 1.1e-102 377.9 278 72.3
BolSC28t60411H Brassica oleracea HOM05D003430 ORTHO05D004809 4.2e-102 375.9 265 75.5
AUR62042332 Chenopodium quinoa HOM05D003430 ORTHO05D004809 1.2e-101 374.4 261 75.9
VMungo0044G0002 Vigna mungo HOM05D003430 ORTHO05D004809 6.1e-101 372.1 265 76.2
Psat3g040120 Pisum sativum HOM05D003430 ORTHO05D004809 2.3e-100 370.2 282 72.7
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 6.3e-98 362.1 259 71.8
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 6.3e-98 362.1 259 71.8
Lj2C1231G44 Lonicera japonica HOM05D003430 ORTHO05D004809 1.8e-97 360.5 266 73.3
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 2.0e-96 357.1 278 67.3
CDE02G0363 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 4.3e-94 349.4 278 68.0
unitig_87.g27925 Utricularia gibba HOM05D003430 ORTHO05D004809 2.1e-93 347.1 278 70.9
Hma1.2p1_1286F.1_g273040 Hydrangea macrophylla HOM05D003430 ORTHO05D004809 3.6e-93 346.3 279 68.8
arahy.Tifrunner.gnm1.ann1.41QMJ9 Arachis hypogaea HOM05D003430 ORTHO05D004809 4.7e-93 345.9 282 67.4
arahy.Tifrunner.gnm1.ann1.AJMC4E Arachis hypogaea HOM05D003430 ORTHO05D004809 4.7e-93 345.9 282 67.4
arahy.Tifrunner.gnm1.ann1.ABQ8F7 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.8e-92 344.0 265 70.2
arahy.Tifrunner.gnm1.ann1.CY2VCK Arachis hypogaea HOM05D003430 ORTHO05D004809 1.8e-92 344.0 265 70.2
Lalb_Chr00c39g0409071 Lupinus albus HOM05D003430 ORTHO05D004809 6.8e-92 342.0 265 71.7
Lalb_Chr00c39g0409251 Lupinus albus HOM05D003430 ORTHO05D004809 6.8e-92 342.0 265 71.7
Lalb_Chr00c51g0413171 Lupinus albus HOM05D003430 ORTHO05D004809 6.8e-92 342.0 265 71.7
Lalb_Chr10g0094601 Lupinus albus HOM05D003430 ORTHO05D004809 2.6e-91 340.1 265 71.7
Sp3g25650 Schrenkiella parvula HOM05D003430 ORTHO05D004809 7.5e-91 338.6 265 70.2
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 6.4e-90 335.5 213 78.4
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 1.1e-89 334.7 188 85.6
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 3.5e-88 329.7 214 77.1
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 6.0e-88 328.9 199 81.4
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 6.0e-88 328.9 199 81.4
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 6.0e-88 328.9 199 81.4
Lsat_1_v5_gn_6_109000 Lactuca sativa HOM05D003430 ORTHO05D004809 2.1e-85 320.5 268 66.4
Nn2g14911 Nelumbo nucifera HOM05D003430 ORTHO05D004809 6.2e-85 318.9 226 74.3
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.1e-84 318.2 199 77.9
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 1.1e-84 318.2 199 77.9
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 1.1e-84 318.2 199 77.9
SHI29634 Sapria himalayana HOM05D003430 ORTHO05D004809 1.1e-84 318.2 269 65.1
Zm00001eb435500 Zea mays HOM05D003430 ORTHO05D004809 2.6e-83 313.5 261 66.7
Zm00001eb436090 Zea mays HOM05D003430 ORTHO05D004809 2.6e-83 313.5 261 66.7
Zm00001eb437350 Zea mays HOM05D003430 ORTHO05D004809 2.6e-83 313.5 261 66.7
Zm00001eb440330 Zea mays HOM05D003430 ORTHO05D004809 2.6e-83 313.5 261 66.7
Zm00001eb440360 Zea mays HOM05D003430 ORTHO05D004809 2.6e-83 313.5 261 66.7
Zm00001eb442170 Zea mays HOM05D003430 ORTHO05D004809 2.6e-83 313.5 261 66.7
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 3.4e-83 313.2 241 67.2
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 5.8e-83 312.4 229 74.2
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 7.5e-83 312.0 199 76.9
Medtr0024s0140 Medicago truncatula HOM05D003430 ORTHO05D004809 1.2e-80 304.7 230 72.6
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 2.1e-80 303.9 188 79.8
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-79 300.8 175 84.6
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.6e-78 295.8 211 71.6
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 1.4e-76 291.2 236 66.5
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 1.4e-76 291.2 236 66.5
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 7.5e-75 285.4 199 73.4
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 9.9e-75 285.0 195 73.3
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 2.4e-73 280.4 188 75.5
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 2.7e-72 276.9 164 81.7
Nitab4.5_0000172g0240 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.6e-70 269.2 268 58.2
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.5e-67 261.2 183 71.6
arahy.Tifrunner.gnm1.ann1.087TPC Arachis hypogaea HOM05D003430 ORTHO05D004809 9.9e-67 258.5 282 56.7
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 4.6e-64 249.6 159 75.5
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 6.0e-64 249.2 156 76.3
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 1.5e-62 244.6 167 73.7
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 2.6e-59 233.8 150 76.7
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 6.0e-56 222.6 137 77.4
Lj2C1222G56 Lonicera japonica HOM05D003430 ORTHO05D004809 3.9e-55 219.9 162 73.5
RhsimMtG0004400 Rhododendron simsii HOM05D003430 ORTHO05D004809 8.7e-55 218.8 154 74.7
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 7.3e-54 215.7 153 73.2
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 2.4e-52 210.7 111 91.0
SHI50824 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-50 204.5 169 65.7
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 8.4e-50 202.2 129 78.3
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 7.1e-49 199.1 161 64.6
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 7.1e-49 199.1 202 57.9
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 7.1e-49 199.1 202 57.9
Nitab4.5_0010559g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 9.3e-49 198.7 110 88.2
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.7e-48 197.2 109 82.6
EL10Ac3g07005 Beta vulgaris HOM05D003430 ORTHO05D004809 3.9e-47 193.4 135 75.6
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 2.1e-45 187.6 161 59.0
Solyc11g039360.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.8e-45 187.2 136 71.3
COL.COLO4_04428 Corchorus olitorius HOM05D003430 ORTHO05D004809 6.2e-45 186.0 142 71.8
CAN.G600.1 Capsicum annuum HOM05D003430 ORTHO05D004809 1.2e-40 171.8 100 83.0
HanXRQChr11g0335401 Helianthus annuus HOM05D003430 ORTHO05D004809 3.5e-40 170.2 214 51.9
BolC1t03461H Brassica oleracea HOM05D003430 ORTHO05D004809 1.0e-39 168.7 112 75.9
Nitab4.5_0004256g0030 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.0e-39 167.2 101 83.2
Nitab4.5_0000172g0960 Nicotiana tabacum HOM05D003430 ORTHO05D004809 8.2e-37 159.1 176 53.4
Lsat_1_v5_gn_5_16620 Lactuca sativa HOM05D003430 ORTHO05D004809 1.1e-36 158.7 157 60.5
arahy.Tifrunner.gnm1.ann1.0UJ9QK Arachis hypogaea HOM05D003430 ORTHO05D004809 1.4e-36 158.3 185 53.0
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 1.8e-36 157.9 204 48.5
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 2.7e-32 144.1 90 77.8
arahy.Tifrunner.gnm1.ann1.J6HUIG Arachis hypogaea HOM05D003430 ORTHO05D026951 4.3e-30 136.7 87 78.2
SHI20518 Sapria himalayana HOM05D003430 ORTHO05D004809 9.7e-30 135.6 131 56.5
SHI20516 Sapria himalayana HOM05D003430 ORTHO05D004809 4.5e-27 126.7 135 55.6
Nitab4.5_0001152g0410 Nicotiana tabacum HOM05D003430 ORTHO05D004809 7.2e-25 119.4 74 79.7
Lalb_Chr21g0308991 Lupinus albus HOM05D002109 ORTHO05D002149 7.9e-24 115.9 82 72.0
HPP92_026915 Vanilla planifolia HOM05D003430 ORTHO05D004809 1.3e-21 108.6 73 69.9
BolC1t03462H Brassica oleracea HOM05D003430 ORTHO05D004809 1.8e-20 104.8 74 73.0
Sabra12G0092700 Salix brachista HOM05D003430 ORTHO05D004809 2.4e-20 104.4 92 63.0
Solyc05g025700.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.4e-20 104.4 109 55.0
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 3.1e-20 104.0 81 61.7
SHI25674 Sapria himalayana HOM05D003430 ORTHO05D004809 7.7e-19 99.4 72 68.1
Aqoxy4G00518 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 2.5e-17 94.4 80 67.5
Solyc03g013370.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.6e-16 91.7 54 79.6
Gohir.D01G117000 Gossypium hirsutum HOM05D003430 ORTHO05D004809 2.7e-16 90.9 80 65.0
SHI04803 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-13 81.6 66 62.1
TPR.G22979 Trifolium pratense HOM05D000681 ORTHO05D007906 1.7e-13 81.6 42 92.9
SHI25675 Sapria himalayana HOM05D003430 ORTHO05D004809 1.4e-12 78.6 52 69.2
AT2G07815 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 1.8e-12 78.2 73 60.3
BraSC54t46375Z Brassica rapa HOM05D003430 ORTHO05D004809 1.8e-12 78.2 73 60.3
BraSC77t46627Z Brassica rapa HOM05D003430 ORTHO05D004809 1.8e-12 78.2 73 60.3
SHI32119 Sapria himalayana HOM05D003430 ORTHO05D004809 7.0e-12 76.3 120 40.8
Prupe.5G026600 Prunus persica HOM05D003430 ORTHO05D004809 1.7e-10 71.6 79 49.4
SHI32117 Sapria himalayana HOM05D003430 ORTHO05D004809 2.9e-10 70.9 66 57.6
Nitab4.5_0000172g1190 Nicotiana tabacum HOM05D003430 ORTHO05D004809 8.5e-10 69.3 40 85.0
SHI33655 Sapria himalayana HOM05D003430 ORTHO05D004809 8.5e-10 69.3 68 55.9
SGA_v2.0_scaffold178G39492 Striga asiatica HOM05D003430 ORTHO05D004809 1.5e-09 68.6 53 58.5
SHI33657 Sapria himalayana HOM05D003430 ORTHO05D004809 3.2e-09 67.4 188 31.4
Nitab4.5_0000684g0110 Nicotiana tabacum HOM05D003430 ORTHO05D015169 5.5e-09 66.6 47 70.2
SHI20517 Sapria himalayana HOM05D003430 ORTHO05D004809 3.6e-08 63.9 68 57.4
SalBow1G2589 Salvia bowleyana HOM05D003430 ORTHO05D004809 4.7e-08 63.5 108 38.9
Mapoly0017s0010 Marchantia polymorpha HOM05D003430 ORTHO05D004809 3.0e-07 60.8 59 57.6
Ciclev10017542m.g Citrus clementina HOM05D003430 ORTHO05D004809 4.4e-06 57.0 37 73.0


User provided reference genes

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