Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001124g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.6e-76 289.3 136 100.0
Nitab4.5_0001124g0060 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.3e-43 179.1 98 87.8
Nitab4.5_0001124g0110 Nicotiana tabacum HOM05D000862 ORTHO05D003588 5.3e-40 167.9 158 58.2
Peaxi162Scf01044g00232 Petunia axillaris HOM05D000862 ORTHO05D003588 2.0e-39 166.0 132 62.1
PGSC0003DMG400043196 Solanum tuberosum HOM05D000862 ORTHO05D003588 2.4e-37 159.1 156 54.5
Nitab4.5_0001124g0070 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.5e-36 155.2 73 100.0
Peaxi162Scf00062g01918 Petunia axillaris HOM05D000862 ORTHO05D003588 1.5e-34 149.8 150 56.7
PGSC0003DMG400041018 Solanum tuberosum HOM05D000862 ORTHO05D003588 3.1e-32 142.1 155 50.3
PGSC0003DMG400041736 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.2e-31 140.2 154 52.6
CAN.G575.18 Capsicum annuum HOM05D000862 ORTHO05D003588 1.1e-29 133.7 151 52.3
Peaxi162Scf00285g00444 Petunia axillaris HOM05D000862 ORTHO05D003588 1.1e-26 123.6 128 54.7
Nitab4.5_0001787g0070 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.5e-26 123.2 152 47.4
CAN.G749.20 Capsicum annuum HOM05D000862 ORTHO05D003588 1.6e-25 119.8 152 45.4
CAN.G749.24 Capsicum annuum HOM05D000862 ORTHO05D003588 1.6e-25 119.8 152 44.7
Solyc09g083030.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 1.8e-24 116.3 151 45.0
Sopen09g031900 Solanum pennellii HOM05D000862 ORTHO05D003588 1.8e-24 116.3 151 45.0
Migut.N00044 Erythranthe guttata HOM05D000862 ORTHO05D003588 4.1e-24 115.2 149 43.0
Nitab4.5_0009547g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 5.3e-24 114.8 152 44.7
CAN.G749.18 Capsicum annuum HOM05D000862 ORTHO05D003588 1.2e-23 113.6 153 49.0
PGSC0003DMG400006098 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.5e-23 113.2 153 46.4
Oeu016489.1 Olea europaea HOM05D007843 ORTHO05D003639 3.4e-23 112.1 148 43.9
PGSC0003DMG400006100 Solanum tuberosum HOM05D000862 ORTHO05D003588 3.4e-23 112.1 147 42.9
SGA_v2.0_scaffold480G52303 Striga asiatica HOM05D000862 ORTHO05D003588 3.4e-23 112.1 148 43.2
Nitab4.5_0000798g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 7.6e-23 110.9 115 53.9
Sopen09g031890 Solanum pennellii HOM05D000862 ORTHO05D003588 1.7e-22 109.8 149 42.3
Solyc09g083020.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 2.9e-22 109.0 147 43.5
Nitab4.5_0001787g0050 Nicotiana tabacum HOM05D000862 ORTHO05D003588 8.5e-22 107.5 162 43.8
Nitab4.5_0000941g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.5e-21 105.9 155 45.8
MSTRG.21770 Avicennia marina HOM05D000862 ORTHO05D003588 9.4e-21 104.0 149 41.6
CAN.G749.17 Capsicum annuum HOM05D000002 ORTHO05D003588 2.1e-20 102.8 144 45.1
Nitab4.5_0012347g0020 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.7e-20 102.4 152 43.4
MSTRG.21769 Avicennia marina HOM05D000862 ORTHO05D003588 1.8e-19 99.8 147 41.5
Nitab4.5_0001124g0120 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.0e-19 99.0 86 64.0
Sopen09g031910 Solanum pennellii HOM05D000862 ORTHO05D003588 3.9e-19 98.6 155 44.5
TAR636G2997 Trochodendron aralioides HOM05D000862 ORTHO05D003588 3.9e-19 98.6 155 41.3
Peaxi162Scf00788g00022 Petunia axillaris HOM05D008029 ORTHO05D003588 1.1e-18 97.1 143 42.0
DCAR_011947 Daucus carota HOM05D000862 ORTHO05D003588 1.5e-18 96.7 148 43.2
TAR636G1580 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.5e-18 96.7 150 43.3
CAN.G575.17 Capsicum annuum HOM05D000966 ORTHO05D002384 2.5e-18 95.9 145 47.6
TAR636G2528 Trochodendron aralioides HOM05D000862 ORTHO05D003588 3.3e-18 95.5 150 43.3
TAR636G1248 Trochodendron aralioides HOM05D000862 ORTHO05D003588 7.4e-18 94.4 157 39.5
Rhsim04G0236200 Rhododendron simsii HOM05D000862 ORTHO05D003588 9.7e-18 94.0 153 38.6
Dinv15179 Davidia involucrata HOM05D000862 ORTHO05D003588 1.3e-17 93.6 152 38.8
TAR636G3530 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.3e-17 93.6 139 44.6
Nitab4.5_0001568g0080 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.7e-17 93.2 158 38.6
Solyc09g083040.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 1.7e-17 93.2 154 42.2
CAN.G749.21 Capsicum annuum HOM05D000862 ORTHO05D003588 2.2e-17 92.8 151 43.7
Actinidia13361 Actinidia chinensis HOM05D000862 ORTHO05D003588 2.8e-17 92.4 155 36.1
Rhsim04G0236500 Rhododendron simsii HOM05D000862 ORTHO05D003588 3.7e-17 92.0 155 37.4
TAR636G1750 Trochodendron aralioides HOM05D000862 ORTHO05D003588 6.3e-17 91.3 150 40.0
CSS0022415 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 1.1e-16 90.5 157 38.2
TAR636G0218 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.1e-16 90.5 125 45.6
TAR636G0912 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.8e-16 89.7 150 38.7
CSS0039572 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 2.4e-16 89.4 165 38.2
Peaxi162Scf00200g00051 Petunia axillaris HOM05D000862 ORTHO05D003588 4.1e-16 88.6 86 57.0
CSS0042531 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 9.1e-16 87.4 150 38.7
Peaxi162Scf00788g00215 Petunia axillaris HOM05D000862 ORTHO05D003588 1.2e-15 87.0 139 38.8
TAR636G2022 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.2e-15 87.0 153 37.9
Sc13g0005910 Simmondsia chinensis HOM05D000862 ORTHO05D003588 2.0e-15 86.3 141 39.7
CSS0029865 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 2.6e-15 85.9 169 35.5
CSS0034808 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 2.6e-15 85.9 169 35.5
CSS0041630 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 3.4e-15 85.5 150 38.7
PGSC0003DMG400036830 Solanum tuberosum HOM05D000862 ORTHO05D003588 3.4e-15 85.5 164 38.4
TAR636G1603 Trochodendron aralioides HOM05D000862 ORTHO05D003588 3.4e-15 85.5 149 38.3
Dinv15175 Davidia involucrata HOM05D000862 ORTHO05D003588 5.9e-15 84.7 140 39.3
Peaxi162Scf00441g00622 Petunia axillaris HOM05D000862 ORTHO05D003588 5.9e-15 84.7 158 37.3
TAR636G0883 Trochodendron aralioides HOM05D000862 ORTHO05D003588 5.9e-15 84.7 142 38.0
DCAR_003013 Daucus carota HOM05D000862 ORTHO05D003588 7.7e-15 84.3 154 35.7
Lsat_1_v5_gn_6_18400 Lactuca sativa HOM05D000862 ORTHO05D003588 7.7e-15 84.3 147 38.8
PGSC0003DMG400040105 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.0e-14 84.0 155 40.0
TAR636G0362 Trochodendron aralioides HOM05D000862 ORTHO05D003588 1.0e-14 84.0 137 38.0
Nitab4.5_0005132g0080 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.9e-14 82.4 135 39.3
DCAR_026995 Daucus carota HOM05D000862 ORTHO05D003588 3.8e-14 82.0 155 37.4
Rhsim04G0236000 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.5e-14 81.3 162 34.0
ECA233G3755 Erigeron canadensis HOM05D000862 ORTHO05D003588 1.1e-13 80.5 154 34.4
CAN.G868.9 Capsicum annuum HOM05D000862 ORTHO05D003588 1.4e-13 80.1 86 51.2
Oeu040720.1 Olea europaea HOM05D000862 ORTHO05D003588 1.4e-13 80.1 81 51.9
HanXRQChr12g0379721 Helianthus annuus HOM05D000862 ORTHO05D003588 3.2e-13 79.0 148 39.2
CAN.G749.25 Capsicum annuum HOM05D000862 ORTHO05D003588 5.5e-13 78.2 149 37.6
Rhsim02G0004300 Rhododendron simsii HOM05D000862 ORTHO05D003588 5.5e-13 78.2 153 36.6
AUR62016202 Chenopodium quinoa HOM05D008029 ORTHO05D003588 9.4e-13 77.4 149 32.9
AUR62039285 Chenopodium quinoa HOM05D008029 ORTHO05D003588 9.4e-13 77.4 141 36.9
Lsat_1_v5_gn_6_16781 Lactuca sativa HOM05D000862 ORTHO05D003588 9.4e-13 77.4 147 35.4
Thhalv10009313m.g Eutrema salsugineum HOM05D008029 ORTHO05D003588 1.2e-12 77.0 149 35.6
Duzib151G0999 Durio zibethinus HOM05D000862 ORTHO05D003588 2.1e-12 76.3 152 36.8
EL10Ac3g05502 Beta vulgaris HOM05D008029 ORTHO05D003588 3.6e-12 75.5 135 39.3
Nitab4.5_0000941g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.6e-12 75.5 248 27.0
AUR62001043 Chenopodium quinoa HOM05D000862 ORTHO05D003588 4.7e-12 75.1 151 34.4
EL10Ac3g05500 Beta vulgaris HOM05D008029 ORTHO05D003588 7.9e-12 74.3 178 31.5
AUR62004914 Chenopodium quinoa HOM05D000862 ORTHO05D003588 7.9e-12 74.3 159 34.0
THA.LOC104815871 Tarenaya hassleriana HOM05D000862 ORTHO05D003588 1.0e-11 73.9 171 36.8
AT1G05770 Arabidopsis thaliana HOM05D000862 ORTHO05D003588 1.8e-11 73.2 157 36.3
Carub.0001s0511 Capsella rubella HOM05D000862 ORTHO05D003588 1.8e-11 73.2 156 35.9
ECA233G4346 Erigeron canadensis HOM05D000862 ORTHO05D003588 1.8e-11 73.2 157 33.8
Oeu019974.1 Olea europaea HOM05D000862 ORTHO05D003588 1.8e-11 73.2 145 35.9
Aqoxy1G02186 Aquilegia oxysepala HOM05D000862 ORTHO05D003588 3.0e-11 72.4 152 32.9
THA.LOC104800919 Tarenaya hassleriana HOM05D000862 ORTHO05D003588 3.0e-11 72.4 165 37.0
Ah.04g156870 Amaranthus hybridus HOM05D008029 ORTHO05D003588 5.1e-11 71.6 143 32.2
BcaC02g07153 Brassica carinata HOM05D008029 ORTHO05D016094 5.1e-11 71.6 132 34.1
AL1G15670 Arabidopsis lyrata HOM05D000862 ORTHO05D003588 6.7e-11 71.2 156 35.3
DCAR_024495 Daucus carota HOM05D000075 ORTHO05D003588 8.8e-11 70.9 154 32.5
Ah.06g187570 Amaranthus hybridus HOM05D000056 ORTHO05D000019 1.1e-10 70.5 172 30.2
AT1G05760 Arabidopsis thaliana HOM05D000862 ORTHO05D003588 2.0e-10 69.7 161 34.8
CARHR005260 Cardamine hirsuta HOM05D000862 ORTHO05D003588 2.0e-10 69.7 156 35.3
CAN.G140.49 Capsicum annuum HOM05D000862 ORTHO05D003588 3.3e-10 68.9 139 33.8
Nitab4.5_0012347g0030 Nicotiana tabacum HOM05D000862 ORTHO05D003588 5.7e-10 68.2 134 37.3
Aqoxy2G02742 Aquilegia oxysepala HOM05D000862 ORTHO05D003588 7.4e-10 67.8 157 31.2
vmacro08049 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 7.4e-10 67.8 199 30.2
Peaxi162Scf00441g00620 Petunia axillaris HOM05D000862 ORTHO05D003588 1.3e-09 67.0 142 35.9
Solyc01g006240.3 Solanum lycopersicum HOM05D000862 ORTHO05D003588 1.3e-09 67.0 140 34.3
Dinv15178 Davidia involucrata HOM05D000862 ORTHO05D003588 2.2e-09 66.2 85 43.5
PGSC0003DMG400032197 Solanum tuberosum HOM05D000862 ORTHO05D003588 2.2e-09 66.2 140 35.0
CAN.G868.8 Capsicum annuum HOM05D000862 ORTHO05D003588 2.8e-09 65.9 58 56.9
Thhalv10008892m.g Eutrema salsugineum HOM05D000862 ORTHO05D003588 2.8e-09 65.9 156 33.3
CAN.G11.36 Capsicum annuum HOM05D000862 ORTHO05D012081 3.7e-09 65.5 72 50.0
Nitab4.5_0001787g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.7e-09 65.5 86 50.0
CARHR050270 Cardamine hirsuta HOM05D008029 ORTHO05D003588 6.3e-09 64.7 161 32.3
Potri.010G144900 Populus trichocarpa HOM05D008029 ORTHO05D003588 6.3e-09 64.7 135 32.6
AL4G42580 Arabidopsis lyrata HOM05D008029 ORTHO05D003588 8.2e-09 64.3 150 31.3
Sp1g04570 Schrenkiella parvula HOM05D000862 ORTHO05D003588 8.2e-09 64.3 157 32.5
EL10Ac1g00597 Beta vulgaris HOM05D000862 ORTHO05D000943 1.1e-08 63.9 152 32.2
BcaC01g05215 Brassica carinata HOM05D008029 ORTHO05D003588 1.1e-08 63.9 141 32.6
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 3.1e-08 62.4 152 32.2
BolC4t28573H Brassica oleracea HOM05D008029 ORTHO05D016094 3.1e-08 62.4 149 30.2
BraA05t19382Z Brassica rapa HOM05D008029 ORTHO05D003588 3.1e-08 62.4 141 31.9
A03p46150 Brassica napus HOM05D008029 ORTHO05D003588 4.1e-08 62.0 140 32.1
A06p31150 Brassica napus HOM05D008029 ORTHO05D003588 4.1e-08 62.0 156 28.2
C04p70730 Brassica napus HOM05D008029 ORTHO05D016094 4.1e-08 62.0 151 31.1
Carub.0004s2627 Capsella rubella HOM05D008029 ORTHO05D003588 7.0e-08 61.2 136 33.8
Lj3A199G59 Lonicera japonica HOM05D000862 ORTHO05D000943 7.0e-08 61.2 145 31.7
Atru.chr13.467 Acer truncatum HOM05D000862 ORTHO05D000943 9.1e-08 60.8 160 35.6
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 9.1e-08 60.8 79 41.8
vmacro08051 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 9.1e-08 60.8 82 43.9
Aa31LG1G25450 Aethionema arabicum HOM05D008029 ORTHO05D003588 1.5e-07 60.1 153 33.3
Eucgr.E04097 Eucalyptus grandis HOM05D000956 ORTHO05D000943 2.0e-07 59.7 148 32.4
Rhsim04G0235800 Rhododendron simsii HOM05D000862 ORTHO05D003588 2.0e-07 59.7 79 40.5
Rhsim04G0238300 Rhododendron simsii HOM05D000862 ORTHO05D003588 2.0e-07 59.7 79 40.5
Rhsim04G0236800 Rhododendron simsii HOM05D000862 ORTHO05D003588 2.6e-07 59.3 88 39.8
Atru.chr1.323 Acer truncatum HOM05D000862 ORTHO05D000943 4.5e-07 58.5 147 33.3
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 4.5e-07 58.5 142 31.0
Rhsim04G0237600 Rhododendron simsii HOM05D000862 ORTHO05D003588 5.9e-07 58.2 80 41.2
Atru.chr1.3872 Acer truncatum HOM05D000862 ORTHO05D000943 7.7e-07 57.8 159 32.7
QL07p019673 Quercus lobata HOM05D000862 ORTHO05D000943 1.0e-06 57.4 152 34.2
Aqoxy2G02743 Aquilegia oxysepala HOM05D000862 ORTHO05D003588 1.3e-06 57.0 82 43.9
AUR62004918 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 57.0 79 39.2
Atru.chr1.3817 Acer truncatum HOM05D000862 ORTHO05D000943 1.7e-06 56.6 159 31.4
CsaV3_3G045300 Cucumis sativus L. HOM05D000125 ORTHO05D000120 1.7e-06 56.6 158 31.0
Lj1A1150T112 Lonicera japonica HOM05D000862 ORTHO05D000943 1.7e-06 56.6 141 28.4
Atru.chr1.3869 Acer truncatum HOM05D000862 ORTHO05D000943 3.8e-06 55.5 150 32.0
Ah.05g180910 Amaranthus hybridus HOM05D000862 ORTHO05D000943 6.5e-06 54.7 155 31.0
DCAR_026996 Daucus carota HOM05D000862 ORTHO05D003588 6.5e-06 54.7 152 31.6
HanXRQChr02g0042151 Helianthus annuus HOM05D000862 ORTHO05D000943 6.5e-06 54.7 143 34.3
Nitab4.5_0001568g0100 Nicotiana tabacum HOM05D000862 ORTHO05D003588 6.5e-06 54.7 124 33.1
Haze_22550 Corylus avellana HOM05D000862 ORTHO05D000943 8.5e-06 54.3 153 31.4


User provided reference genes

Program Settings