Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001118g0010 Nicotiana tabacum HOM05D001316 ORTHO05D001113 1.7e-70 269.2 141 100.0
Nitab4.5_0008776g0020 Nicotiana tabacum HOM05D001316 ORTHO05D001113 7.4e-21 104.4 63 87.3
Peaxi162Scf00026g01610 Petunia axillaris HOM05D001316 ORTHO05D001113 1.0e-17 94.0 63 79.4
CAN.G1377.7 Capsicum annuum HOM05D001316 ORTHO05D001113 1.4e-16 90.1 63 77.8
PGSC0003DMG400021891 Solanum tuberosum HOM05D001316 ORTHO05D001113 5.5e-16 88.2 64 78.1
Solyc01g010270.3 Solanum lycopersicum HOM05D001316 ORTHO05D001113 2.3e-14 82.8 64 76.6
Sopen01g005890 Solanum pennellii HOM05D001316 ORTHO05D001113 2.3e-14 82.8 64 76.6
Dinv17432 Davidia involucrata HOM05D001316 ORTHO05D001113 1.3e-12 77.0 67 62.7
Nitab4.5_0007061g0060 Nicotiana tabacum HOM05D001316 ORTHO05D001113 1.7e-12 76.6 63 71.4
CSS0034679 Camellia sinensis var. sinensis HOM05D001316 ORTHO05D001113 3.7e-12 75.5 63 65.1
CiPaw.05G124300 Carya illinoinensis HOM05D001316 ORTHO05D001113 6.3e-12 74.7 63 63.5
Nitab4.5_0000231g0110 Nicotiana tabacum HOM05D001316 ORTHO05D001113 6.3e-12 74.7 63 69.8
SalBow4G1992 Salvia bowleyana HOM05D001316 ORTHO05D001113 8.2e-12 74.3 138 42.0
SalBow4G2688 Salvia bowleyana HOM05D004399 ORTHO05D005303 8.2e-12 74.3 131 43.5
SalBow4G3239 Salvia bowleyana HOM05D001316 ORTHO05D001113 8.2e-12 74.3 131 43.5
Potri.010G157600 Populus trichocarpa HOM05D001316 ORTHO05D001113 1.1e-11 73.9 63 61.9
Peaxi162Scf00175g00418 Petunia axillaris HOM05D001316 ORTHO05D001113 3.1e-11 72.4 63 66.7
Sabra10G0119500 Salix brachista HOM05D001316 ORTHO05D001113 3.1e-11 72.4 58 63.8
Haze_11895 Corylus avellana HOM05D001316 ORTHO05D001113 4.1e-11 72.0 66 63.6
Manes.01G026900 Manihot esculenta HOM05D001316 ORTHO05D001113 5.3e-11 71.6 63 60.3
CAN.G707.12 Capsicum annuum HOM05D001316 ORTHO05D001113 7.0e-11 71.2 63 68.3
Potri.008G097000 Populus trichocarpa HOM05D001316 ORTHO05D001113 7.0e-11 71.2 63 61.9
QL03p073924 Quercus lobata HOM05D001316 ORTHO05D001113 9.1e-11 70.9 65 61.5
CSS0015605 Camellia sinensis var. sinensis HOM05D001316 ORTHO05D001113 1.6e-10 70.1 62 62.9
Solyc05g012160.3 Solanum lycopersicum HOM05D001316 ORTHO05D001113 1.6e-10 70.1 52 71.2
Sopen05g006950 Solanum pennellii HOM05D001316 ORTHO05D001113 1.6e-10 70.1 52 71.2
PGSC0003DMG400028366 Solanum tuberosum HOM05D001316 ORTHO05D001113 1.6e-10 70.1 52 71.2
CAN.G40.13 Capsicum annuum HOM05D001316 ORTHO05D001113 2.6e-10 69.3 63 68.3
SalBow2G2777 Salvia bowleyana HOM05D001316 ORTHO05D001113 2.6e-10 69.3 102 46.1
SalBow4G1468 Salvia bowleyana HOM05D001316 ORTHO05D001113 2.6e-10 69.3 63 63.5
SGA_v2.0_scaffold16G07802 Striga asiatica HOM05D001316 ORTHO05D001113 2.6e-10 69.3 63 65.1
vmacro10432 Vaccinium macrocarpon HOM05D001316 ORTHO05D001113 4.5e-10 68.6 63 60.3
TWI31G0776 Tripterygium wilfordii HOM05D001316 ORTHO05D001113 5.9e-10 68.2 64 62.5
TWI31G1178 Tripterygium wilfordii HOM05D001316 ORTHO05D001113 5.9e-10 68.2 64 62.5
GSVIVG01012230001 Vitis vinifera HOM05D001316 ORTHO05D001113 7.7e-10 67.8 63 60.3
Manes.05G109500 Manihot esculenta HOM05D001316 ORTHO05D001113 1.0e-09 67.4 63 60.3
TAR629G1017 Trochodendron aralioides HOM05D001316 ORTHO05D001113 1.0e-09 67.4 63 58.7
Migut.L01180 Erythranthe guttata HOM05D001316 ORTHO05D001113 1.3e-09 67.0 62 66.1
Sp1g22340 Schrenkiella parvula HOM05D001316 ORTHO05D001113 2.2e-09 66.2 53 69.8
vmacro20930 Vaccinium macrocarpon HOM05D001316 ORTHO05D001113 2.2e-09 66.2 63 58.7
Prupe.1G288700 Prunus persica HOM05D001316 ORTHO05D001113 3.8e-09 65.5 67 53.7
TWI75G0290 Tripterygium wilfordii HOM05D001316 ORTHO05D001113 3.8e-09 65.5 64 60.9
AT1G26355 Arabidopsis thaliana HOM05D001316 ORTHO05D001113 5.0e-09 65.1 52 69.2
Lalb_Chr17g0341261 Lupinus albus HOM05D001316 ORTHO05D001113 5.0e-09 65.1 60 71.7
TAR622G0843 Trochodendron aralioides HOM05D001316 ORTHO05D001113 5.0e-09 65.1 55 67.3
Rhsim09G0126400 Rhododendron simsii HOM05D001316 ORTHO05D001113 8.5e-09 64.3 63 58.7
TPR.G24467 Trifolium pratense HOM05D001316 ORTHO05D001113 8.5e-09 64.3 60 63.3
SalBow4G1455 Salvia bowleyana HOM05D001316 ORTHO05D001113 1.1e-08 63.9 63 60.3
SalBow4G1960 Salvia bowleyana HOM05D001316 ORTHO05D001113 1.1e-08 63.9 63 60.3
Gohir.D13G083000 Gossypium hirsutum HOM05D001316 ORTHO05D001113 1.5e-08 63.5 51 68.6
Gorai.013G094900 Gossypium raimondii HOM05D001316 ORTHO05D001113 1.5e-08 63.5 51 68.6
Oeu048136.1 Olea europaea HOM05D001316 ORTHO05D001113 1.5e-08 63.5 61 62.3
Aa31LG7G8700 Aethionema arabicum HOM05D001316 ORTHO05D001113 1.9e-08 63.2 54 63.0
Lj2g0003657 Lotus japonicus HOM05D001316 ORTHO05D001113 1.9e-08 63.2 54 68.5
Gohir.A13G083100 Gossypium hirsutum HOM05D001316 ORTHO05D001113 2.5e-08 62.8 51 68.6
Medtr5g045310 Medicago truncatula HOM05D001316 ORTHO05D001113 2.5e-08 62.8 57 64.9
Rhsim12G0074400 Rhododendron simsii HOM05D001316 ORTHO05D001113 2.5e-08 62.8 63 58.7
MSTRG.13452 Avicennia marina HOM05D001316 ORTHO05D001113 3.2e-08 62.4 63 58.7
MD16G1059900 Malus domestica HOM05D001316 ORTHO05D001113 3.2e-08 62.4 61 57.4
Ca_04984_v3 Cicer arietinum L. HOM05D001316 ORTHO05D001113 4.2e-08 62.0 51 68.6
MD13G1061400 Malus domestica HOM05D001316 ORTHO05D001113 4.2e-08 62.0 59 59.3
Manes.06G082900 Manihot esculenta HOM05D001316 ORTHO05D001113 4.2e-08 62.0 64 59.4
Glyma.01G060900 Glycine max HOM05D001316 ORTHO05D001113 5.5e-08 61.6 60 63.3
FvH4_4g29840 Fragaria vesca HOM05D001316 ORTHO05D001113 7.2e-08 61.2 49 69.4
FAN12G3040 Fragaria x ananassa HOM05D001316 ORTHO05D001113 7.2e-08 61.2 49 69.4
COL.COLO4_27865 Corchorus olitorius HOM05D001316 ORTHO05D001113 9.4e-08 60.8 63 58.7
Migut.E00046 Erythranthe guttata HOM05D001316 ORTHO05D001113 9.4e-08 60.8 64 57.8
unitig_749.g13210 Utricularia gibba HOM05D001316 ORTHO05D001113 9.4e-08 60.8 63 58.7
Cpa.g.sc1.138 Carica papaya HOM05D001316 ORTHO05D001113 1.6e-07 60.1 81 48.1
Eucgr.B03146 Eucalyptus grandis HOM05D001316 ORTHO05D001113 1.6e-07 60.1 63 54.0
THA.LOC104808527 Tarenaya hassleriana HOM05D001316 ORTHO05D001113 1.6e-07 60.1 63 58.7
Cpa.g.sc285.4 Carica papaya HOM05D001316 ORTHO05D001113 2.1e-07 59.7 63 57.1
Dinv34932 Davidia involucrata HOM05D000224 ORTHO05D001489 2.1e-07 59.7 67 53.7
Glyma.02G119200 Glycine max HOM05D001316 ORTHO05D001113 3.6e-07 58.9 49 67.3
Gohir.A03G104600 Gossypium hirsutum HOM05D001316 ORTHO05D001113 3.6e-07 58.9 57 61.4
Gohir.D02G129800 Gossypium hirsutum HOM05D001316 ORTHO05D001113 3.6e-07 58.9 57 61.4
Gorai.005G145800 Gossypium raimondii HOM05D001316 ORTHO05D001113 3.6e-07 58.9 57 61.4
Sc14g0007950 Simmondsia chinensis HOM05D001316 ORTHO05D001113 3.6e-07 58.9 58 58.6
GSVIVG01000553001 Vitis vinifera HOM05D001316 ORTHO05D001113 3.6e-07 58.9 63 54.0
FAN17G2025 Fragaria x ananassa HOM05D000113 ORTHO05D005275 4.7e-07 58.5 51 64.7
FAN22G2227 Fragaria x ananassa HOM05D001316 ORTHO05D001113 4.7e-07 58.5 51 64.7
HanXRQChr09g0269621 Helianthus annuus HOM05D001316 ORTHO05D001113 4.7e-07 58.5 77 48.1
TAR374G1493 Trochodendron aralioides HOM05D000712 ORTHO05D000617 4.7e-07 58.5 63 55.6
MSTRG.11334 Avicennia marina HOM05D001316 ORTHO05D001113 6.1e-07 58.2 69 53.6
Duzib068G0106 Durio zibethinus HOM05D001316 ORTHO05D001113 6.1e-07 58.2 70 54.3
Duzib251G0243 Durio zibethinus HOM05D001316 ORTHO05D001113 6.1e-07 58.2 63 57.1
arahy.Tifrunner.gnm1.ann1.3UD8ME Arachis hypogaea HOM05D001316 ORTHO05D001113 8.0e-07 57.8 56 69.6
Hma1.2p1_0322F.1_g124610 Hydrangea macrophylla HOM05D001316 ORTHO05D001113 8.0e-07 57.8 63 57.1
Lalb_Chr04g0255611 Lupinus albus HOM05D001316 ORTHO05D001113 8.0e-07 57.8 61 63.9
Oeu052965.1 Olea europaea HOM05D001316 ORTHO05D001113 8.0e-07 57.8 61 60.7
MD13G1060700 Malus domestica HOM05D001316 ORTHO05D001113 1.0e-06 57.4 66 57.6
Thecc.03G104400 Theobroma cacao HOM05D001316 ORTHO05D001113 1.0e-06 57.4 71 52.1
THA.LOC104822004 Tarenaya hassleriana HOM05D001316 ORTHO05D001113 1.4e-06 57.0 63 55.6
unitig_8.g3181 Utricularia gibba HOM05D000113 ORTHO05D005275 1.4e-06 57.0 56 57.1
GSVIVG01038688001 Vitis vinifera HOM05D001316 ORTHO05D001113 1.4e-06 57.0 38 78.9
arahy.Tifrunner.gnm1.ann1.8EYB6E Arachis hypogaea HOM05D001316 ORTHO05D001113 1.8e-06 56.6 56 67.9
MSTRG.7739 Avicennia marina HOM05D001316 ORTHO05D001113 1.8e-06 56.6 63 54.0
Duzib248G1465 Durio zibethinus HOM05D001316 ORTHO05D001113 1.8e-06 56.6 43 67.4
Potri.015G059100 Populus trichocarpa HOM05D001316 ORTHO05D001113 1.8e-06 56.6 51 62.7
COL.COLO4_24320 Corchorus olitorius HOM05D001316 ORTHO05D001113 2.3e-06 56.2 44 65.9
GSVIVG01008116001 Vitis vinifera HOM05D001316 ORTHO05D001113 2.3e-06 56.2 54 61.1
Psat2g131160 Pisum sativum HOM05D001316 ORTHO05D001113 3.0e-06 55.8 57 61.4
CSS0036076 Camellia sinensis var. sinensis HOM05D001316 ORTHO05D001113 4.0e-06 55.5 63 55.6
Cc00_g03400 Coffea canephora HOM05D001316 ORTHO05D001113 4.0e-06 55.5 63 52.4
Gohir.D07G072200 Gossypium hirsutum HOM05D001316 ORTHO05D001113 4.0e-06 55.5 71 53.5
PGR083G0489 Punica granatum HOM05D001316 ORTHO05D001113 4.0e-06 55.5 62 53.2
Thecc.02G328900 Theobroma cacao HOM05D001316 ORTHO05D001113 4.0e-06 55.5 43 67.4
GSVIVG01032901001 Vitis vinifera HOM05D001316 ORTHO05D001113 4.0e-06 55.5 57 57.9
Aqoxy3G03666 Aquilegia oxysepala HOM05D001316 ORTHO05D001113 5.2e-06 55.1 54 66.7
EL10Ac6g15012 Beta vulgaris HOM05D001316 ORTHO05D001113 5.2e-06 55.1 53 60.4
Cc07_g04350 Coffea canephora HOM05D001316 ORTHO05D001113 5.2e-06 55.1 63 54.0
Nn3g17479 Nelumbo nucifera HOM05D001316 ORTHO05D001113 5.2e-06 55.1 53 56.6
PGR102G0948 Punica granatum HOM05D001316 ORTHO05D001113 5.2e-06 55.1 49 61.2
SEGI_25309 Sequoiadendron giganteum HOM05D001316 ORTHO05D001113 5.2e-06 55.1 47 66.0
AUR62003088 Chenopodium quinoa HOM05D001316 ORTHO05D001113 6.7e-06 54.7 52 65.4
Nn4g23461 Nelumbo nucifera HOM05D001316 ORTHO05D001113 6.7e-06 54.7 63 55.6
Nitab4.5_0009044g0030 Nicotiana tabacum HOM05D001316 ORTHO05D001113 6.7e-06 54.7 63 54.0
Gohir.A07G067600 Gossypium hirsutum HOM05D001316 ORTHO05D001113 8.8e-06 54.3 70 52.9
Gorai.003G102000 Gossypium raimondii HOM05D001316 ORTHO05D001113 8.8e-06 54.3 64 51.6
Lsat_1_v5_gn_3_53761 Lactuca sativa HOM05D001316 ORTHO05D001113 8.8e-06 54.3 69 53.6
Potri.017G095200 Populus trichocarpa HOM05D001316 ORTHO05D001113 8.8e-06 54.3 57 56.1
PGSC0003DMG400024631 Solanum tuberosum HOM05D001316 ORTHO05D001113 8.8e-06 54.3 56 55.4


User provided reference genes

Program Settings