Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001114g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.3e-65 251.5 125 100.0
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.5e-44 183.0 156 65.4
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.6e-43 178.3 129 72.1
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.8e-42 173.7 155 60.0
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-41 173.3 126 72.2
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-39 166.8 155 60.6
Nitab4.5_0014959g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-39 165.2 118 73.7
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-39 165.2 155 57.4
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.0e-39 164.1 155 59.4
Nitab4.5_0000098g0180 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-38 162.2 190 51.1
Nitab4.5_0000403g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-34 149.8 139 58.3
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.5e-33 146.4 118 66.1
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-32 143.3 158 56.3
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-32 143.3 151 57.0
Nitab4.5_0001146g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.2e-31 137.1 89 79.8
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.9e-29 132.1 141 56.0
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.6e-28 127.9 132 58.3
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.0e-25 119.4 132 53.8
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.4e-24 114.4 118 57.6
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-24 114.0 115 57.4
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-24 114.0 142 52.8
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-23 113.6 122 56.6
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-23 112.5 123 56.1
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-23 112.1 134 50.0
Nitab4.5_0001259g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.6e-22 109.8 123 49.6
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.6e-22 108.2 123 50.4
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.5e-20 103.2 109 56.9
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.6e-19 99.8 109 54.1
Nitab4.5_0011275g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-18 97.1 68 70.6
Nitab4.5_0002052g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-18 96.3 58 82.8
Nitab4.5_0003350g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-18 96.3 72 69.4
Nitab4.5_0017747g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.2e-18 94.7 60 76.7
Nitab4.5_0000034g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-17 93.6 61 80.3
Nitab4.5_0001057g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-17 93.6 123 50.4
Nitab4.5_0003994g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-17 93.6 60 75.0
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.4e-17 92.0 80 63.8
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.4e-17 92.0 60 75.0
Nitab4.5_0013466g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-17 92.0 106 53.8
Nitab4.5_0002642g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.8e-17 91.3 55 80.0
Nitab4.5_0001969g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.8e-17 90.5 57 77.2
Nitab4.5_0000255g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.9e-16 88.2 71 64.8
Nitab4.5_0000125g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-16 87.4 107 47.7
Nitab4.5_0001439g0130 Nicotiana tabacum HOM05D002262 ORTHO05D016873 8.3e-16 87.4 53 77.4
Nitab4.5_0003069g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-16 87.4 78 60.3
Nitab4.5_0024778g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-15 85.5 55 74.5
Nitab4.5_0006865g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.4e-15 84.7 55 76.4
Nitab4.5_0005273g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.5e-14 82.0 123 43.9
Nitab4.5_0001425g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.8e-14 80.9 152 40.1
Nitab4.5_0002052g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.0e-13 79.0 67 64.2
Nitab4.5_0001992g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.1e-13 78.2 61 63.9
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-12 77.0 113 35.4
Nitab4.5_0000125g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.5e-12 76.6 98 49.0
Nitab4.5_0002908g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.5e-12 76.6 40 87.5
Nitab4.5_0000022g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-12 76.3 153 34.0
Nitab4.5_0005997g0040 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.9e-12 76.3 141 35.5
Nitab4.5_0002534g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.5e-12 75.9 61 68.9
Nitab4.5_0020511g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.6e-12 74.7 117 46.2
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.3e-12 74.3 145 34.5
Nitab4.5_0005377g0020 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.5e-12 73.9 131 32.8
Nitab4.5_0001771g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.6e-11 72.0 49 73.5
Nitab4.5_0001771g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-10 70.5 46 80.4
Nitab4.5_0000114g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.8e-10 69.7 114 35.1
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-10 69.7 60 65.0
Nitab4.5_0009415g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.0e-10 68.6 129 32.6
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 6.8e-10 67.8 134 29.9
Nitab4.5_0000391g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.8e-10 67.8 73 52.1
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 8.9e-10 67.4 134 29.9
Nitab4.5_0000034g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.9e-10 67.4 60 63.3
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 8.9e-10 67.4 141 34.8
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 1.2e-09 67.0 134 29.1
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 2.6e-09 65.9 134 29.1
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 3.4e-09 65.5 134 29.1
Nitab4.5_0000219g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-09 65.5 48 66.7
Nitab4.5_0003134g0170 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.3e-08 63.5 80 35.0
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 1.7e-08 63.2 134 28.4
Nitab4.5_0000340g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-08 63.2 38 76.3
Nitab4.5_0006678g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-08 63.2 121 39.7
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.2e-08 62.8 143 32.9
Nitab4.5_0010096g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.2e-08 62.8 103 35.9
Nitab4.5_0000074g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.9e-08 62.4 58 60.3
Nitab4.5_0000662g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.9e-08 62.4 114 43.0
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.9e-08 62.4 80 41.2
Nitab4.5_0000384g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.3e-08 60.8 85 38.8
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 8.3e-08 60.8 57 47.4
Nitab4.5_0007595g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-07 60.5 57 43.9
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-07 60.5 140 30.0
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-07 59.7 140 30.0
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-07 59.3 57 43.9
Nitab4.5_0002347g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-07 59.3 58 44.8
Nitab4.5_0009434g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-07 59.3 160 30.6
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 2.4e-07 59.3 145 31.0
CAN.G182.16 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-07 58.9 152 25.7
CAN.G874.53 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-07 58.9 144 28.5
Solyc09g020160.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.4e-07 58.2 157 28.0
CAN.G337.146 Capsicum annuum HOM05D000679 ORTHO05D000137 7.1e-07 57.8 146 30.1
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 7.1e-07 57.8 135 33.3
Nitab4.5_0003201g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 9.2e-07 57.4 61 41.0
Nitab4.5_0004809g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.2e-07 57.4 57 47.4
Nitab4.5_0016795g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.2e-07 57.4 87 47.1
Solyc01g094723.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 9.2e-07 57.4 157 28.0
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.2e-06 57.0 129 33.3
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.2e-06 57.0 78 37.2
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 1.2e-06 57.0 139 32.4
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 1.6e-06 56.6 123 26.8
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.6e-06 56.6 135 30.4
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 2.1e-06 56.2 146 26.7
Nitab4.5_0011140g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-06 56.2 57 45.6
Sopen09g029010 Solanum pennellii HOM05D000679 ORTHO05D000137 2.1e-06 56.2 140 28.6
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 2.7e-06 55.8 84 34.5
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 2.7e-06 55.8 140 28.6
Nitab4.5_0006099g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.5e-06 55.5 145 29.0
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 3.5e-06 55.5 121 31.4
Nitab4.5_0000434g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.6e-06 55.1 57 42.1
Nitab4.5_0007888g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.6e-06 55.1 57 43.9
CAN.G453.11 Capsicum annuum HOM05D000679 ORTHO05D000137 6.0e-06 54.7 146 29.5
Nitab4.5_0000440g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.0e-06 54.7 151 29.1
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 6.0e-06 54.7 130 34.6
CAN.G75.5 Capsicum annuum HOM05D009195 ORTHO05D000137 7.8e-06 54.3 142 27.5
Nitab4.5_0004407g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 7.8e-06 54.3 54 40.7
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 7.8e-06 54.3 142 31.7
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 7.8e-06 54.3 142 27.5


User provided reference genes

Program Settings