Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-71 272.7 139 100.0
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-38 162.5 323 38.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.3e-37 158.7 343 35.9
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.7e-33 145.2 251 39.4
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.6e-28 129.8 76 86.8
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.1e-27 125.6 71 88.7
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.0e-27 125.2 76 84.2
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.0e-27 125.2 77 81.8
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.2e-27 124.8 77 81.8
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.0e-26 122.9 76 82.9
Nitab4.5_0009324g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-22 109.8 78 70.5
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-22 109.4 95 63.2
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.9e-22 108.6 96 65.6
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.1e-22 108.2 63 87.3
Nitab4.5_0000555g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.3e-21 105.1 232 34.9
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.3e-21 104.4 93 61.3
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.3e-21 104.4 72 75.0
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.6e-21 104.0 288 34.7
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-19 99.8 96 59.4
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.3e-17 93.6 55 81.8
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-17 92.4 95 55.8
Nitab4.5_0003194g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.6e-13 78.2 73 60.3
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 2.6e-10 69.3 63 57.1
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 2.6e-10 69.3 64 54.7
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 2.6e-10 69.3 64 54.7
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 2.6e-10 69.3 64 54.7
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 2.6e-10 69.3 64 54.7
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 2.6e-10 69.3 64 54.7
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.6e-10 69.3 96 46.9
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.4e-10 68.6 42 78.6
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 5.8e-10 68.2 64 53.1
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 7.6e-10 67.8 64 53.1
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 7.6e-10 67.8 64 54.7
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 9.9e-10 67.4 58 55.2
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.3e-09 67.0 63 54.0
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-09 67.0 54 57.4
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 1.7e-09 66.6 74 47.3
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.7e-09 66.6 54 57.4
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.7e-09 66.6 54 57.4
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 2.2e-09 66.2 66 45.5
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 2.2e-09 66.2 64 53.1
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 3.8e-09 65.5 74 47.3
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.9e-09 65.1 51 62.7
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 4.9e-09 65.1 65 55.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 4.9e-09 65.1 64 51.6
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 6.4e-09 64.7 52 57.7
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 8.4e-09 64.3 86 43.0
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 1.1e-08 63.9 73 45.2
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.4e-08 63.5 51 62.7
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 1.9e-08 63.2 69 42.0
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-08 62.8 40 75.0
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 4.2e-08 62.0 64 51.6
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 5.4e-08 61.6 67 49.3
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.4e-08 61.6 63 52.4
Nitab4.5_0003688g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.1e-08 61.2 151 35.1
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 7.1e-08 61.2 74 44.6
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.3e-08 60.8 98 38.8
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-07 60.5 52 63.5
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-07 60.5 82 47.6
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 1.2e-07 60.5 47 61.7
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 1.6e-07 60.1 52 50.0
Peaxi162Scf00385g00076 Petunia axillaris HOM05D004064 ORTHO05D009561 2.1e-07 59.7 44 59.1
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.1e-07 59.7 72 48.6
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.0e-07 58.2 51 54.9
Nitab4.5_0000263g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.9e-07 57.8 50 58.0
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 1.0e-06 57.4 63 50.8
Peaxi162Scf00780g01011 Petunia axillaris HOM05D004064 ORTHO05D009561 1.0e-06 57.4 56 51.8
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.0e-06 57.4 56 53.6
Sopen07g007160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-06 57.4 63 52.4
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 1.3e-06 57.0 71 45.1
Nitab4.5_0000519g0420 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-06 57.0 77 42.9
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-06 57.0 62 48.4
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.3e-06 57.0 73 43.8
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-06 56.6 86 41.9
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.3e-06 56.2 50 58.0
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 2.3e-06 56.2 93 36.6
PGSC0003DMG400042636 Solanum tuberosum HOM05D000017 ORTHO05D009561 2.3e-06 56.2 90 41.1
Nitab4.5_0000616g0100 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.0e-06 55.8 47 53.2
Nitab4.5_0002403g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.0e-06 55.8 78 41.0
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.0e-06 55.8 57 52.6
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 3.0e-06 55.8 47 59.6
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 3.0e-06 55.8 93 36.6
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.0e-06 55.8 56 48.2
Nitab4.5_0000025g0440 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.9e-06 55.5 45 57.8
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.9e-06 55.5 50 54.0
Peaxi162Scf00270g00413 Petunia axillaris HOM05D004064 ORTHO05D009561 3.9e-06 55.5 61 49.2
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.1e-06 55.1 60 46.7
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 5.1e-06 55.1 60 50.0
PGSC0003DMG400001253 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.1e-06 55.1 61 49.2
Nitab4.5_0000309g0360 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.6e-06 54.7 38 68.4
Nitab4.5_0005003g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.6e-06 54.7 50 56.0
Nitab4.5_0001068g0130 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.7e-06 54.3 45 55.6
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.7e-06 54.3 45 53.3
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 8.7e-06 54.3 76 42.1
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 8.7e-06 54.3 45 60.0


User provided reference genes

Program Settings