Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001107g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 2.4e-111 405.6 214 100.0
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 3.5e-54 215.7 155 79.4
Nitab4.5_0000082g0230 Nicotiana tabacum HOM05D011002 ORTHO05D000006 5.9e-46 188.3 220 52.7
Nitab4.5_0001880g0030 Nicotiana tabacum HOM05D011002 ORTHO05D286330 2.9e-45 186.0 146 71.9
Nitab4.5_0002591g0020 Nicotiana tabacum HOM05D011002 ORTHO05D283749 3.5e-38 162.5 118 75.4
Nitab4.5_0003241g0050 Nicotiana tabacum HOM05D011002 ORTHO05D284236 1.5e-36 157.1 129 72.1
Nitab4.5_0000883g0200 Nicotiana tabacum HOM05D011002 ORTHO05D000007 1.2e-30 137.5 99 80.8
Nitab4.5_0000379g0060 Nicotiana tabacum HOM05D011002 ORTHO05D283817 1.8e-26 123.6 257 40.1
Nitab4.5_0001790g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-26 122.9 157 43.9
Nitab4.5_0000270g0200 Nicotiana tabacum HOM05D011002 ORTHO05D000007 2.2e-24 116.7 126 57.9
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-24 115.2 61 83.6
Nitab4.5_0000457g0450 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.2e-23 112.8 59 89.8
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.5e-22 109.4 59 83.1
Nitab4.5_0002591g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 5.1e-21 105.5 65 76.9
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-20 104.0 169 45.6
Nitab4.5_0005284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-18 95.5 158 43.0
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.3e-16 90.9 228 33.3
Nitab4.5_0005334g0060 Nicotiana tabacum HOM05D012219 ORTHO05D000006 3.8e-16 89.4 213 32.9
Nitab4.5_0002737g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-15 87.4 59 61.0
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.4e-15 85.5 235 31.1
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-15 84.7 185 37.3
Nitab4.5_0011177g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.6e-14 82.4 81 49.4
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 5.1e-13 79.0 155 31.0
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.6e-13 78.2 59 57.6
Nitab4.5_0000832g0100 Nicotiana tabacum HOM05D026524 ORTHO05D000006 7.3e-12 75.1 59 54.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-12 74.7 59 54.2
Nitab4.5_0005284g0040 Nicotiana tabacum HOM05D011002 ORTHO05D285812 9.6e-12 74.7 145 37.9
Nitab4.5_0000164g0060 Nicotiana tabacum HOM05D000024 ORTHO05D283039 2.8e-11 73.2 114 43.0
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-11 73.2 157 33.8
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.7e-11 72.4 59 55.9
Nitab4.5_0005859g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.1e-11 71.6 59 52.5
Nitab4.5_0000527g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.8e-10 70.5 59 52.5
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-10 70.5 60 50.0
Nitab4.5_0005065g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.8e-10 70.5 200 30.5
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-10 70.1 56 50.0
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-09 67.8 59 50.8
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.8 58 51.7
Nitab4.5_0001123g0050 Nicotiana tabacum HOM05D011002 ORTHO05D000006 1.5e-09 67.4 87 39.1
Nitab4.5_0002590g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.0e-09 67.0 59 47.5
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.6e-09 66.6 59 52.5
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-09 66.6 216 26.4
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-09 66.6 280 27.1
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.6e-09 66.6 59 47.5
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-09 66.6 206 27.7
Nitab4.5_0000396g0200 Nicotiana tabacum HOM05D011951 ORTHO05D000006 3.4e-09 66.2 180 30.0
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.4e-09 66.2 58 51.7
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-09 65.5 59 49.2
Nitab4.5_0001660g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.9e-09 64.7 81 38.3
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.3e-08 64.3 58 46.6
Nitab4.5_0006768g0010 Nicotiana tabacum HOM05D000125 ORTHO05D013275 1.7e-08 63.9 46 52.2
Nitab4.5_0004728g0120 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.2e-08 63.5 203 30.0
Nitab4.5_0005500g0060 Nicotiana tabacum HOM05D000024 ORTHO05D284227 2.2e-08 63.5 215 31.2
Nitab4.5_0001569g0210 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.9e-08 63.2 54 53.7
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.9e-08 63.2 59 45.8
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.8e-08 62.8 59 47.5
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-08 62.8 55 50.9
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-08 62.0 66 42.4
Nitab4.5_0002114g0100 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.4e-08 62.0 46 52.2
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.4e-08 62.0 223 24.7
Nitab4.5_0000540g0160 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.4e-08 61.6 54 50.0
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-07 61.2 58 48.3
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-07 60.5 223 27.8
Nitab4.5_0002880g0060 Nicotiana tabacum HOM05D011002 ORTHO05D000007 1.9e-07 60.5 143 36.4
Nitab4.5_0004763g0010 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.4e-07 60.1 59 42.4
Nitab4.5_0000404g0050 Nicotiana tabacum HOM05D000024 ORTHO05D283760 9.3e-07 58.2 87 47.1
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-06 57.8 59 44.1
Nitab4.5_0013732g0010 Nicotiana tabacum HOM05D000024 ORTHO05D283900 1.2e-06 57.8 163 34.4
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 1.6e-06 57.4 173 23.7
Nitab4.5_0007582g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.6e-06 57.4 59 47.5
Nitab4.5_0004384g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.1e-06 57.0 51 45.1
Nitab4.5_0000270g0240 Nicotiana tabacum HOM05D008844 ORTHO05D283287 2.7e-06 56.6 93 38.7
Nitab4.5_0000712g0070 Nicotiana tabacum HOM05D026524 ORTHO05D000006 2.7e-06 56.6 173 27.7
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.7e-06 56.6 104 33.7
Nitab4.5_0000106g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-06 56.2 54 57.4
Nitab4.5_0006711g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.5e-06 56.2 29 72.4
SHI48783 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-06 56.2 93 32.3
PGSC0003DMG400033353 Solanum tuberosum HOM05D000024 ORTHO05D000006 4.6e-06 55.8 59 39.0
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-06 55.5 89 33.7
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 7.8e-06 55.1 58 41.4


User provided reference genes

Program Settings