Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001105g0190 Nicotiana tabacum HOM05D000907 ORTHO05D036422 2.6e-39 164.9 78 100.0
Nitab4.5_0004685g0110 Nicotiana tabacum HOM05D000907 ORTHO05D036422 8.3e-14 80.1 41 92.7
Prupe.8G141300 Prunus persica HOM05D000907 ORTHO05D000753 4.0e-08 61.2 103 37.9
Thecc.02G114100 Theobroma cacao HOM05D000907 ORTHO05D000753 4.0e-08 61.2 103 39.8
Nitab4.5_0001259g0090 Nicotiana tabacum HOM05D000907 ORTHO05D000753 5.2e-08 60.8 102 42.2
Nitab4.5_0012285g0020 Nicotiana tabacum HOM05D000907 ORTHO05D000753 6.8e-08 60.5 102 40.2
Atru.chr5.2406 Acer truncatum HOM05D000907 ORTHO05D000753 2.0e-07 58.9 103 37.9
COL.COLO4_32539 Corchorus olitorius HOM05D000907 ORTHO05D000753 2.6e-07 58.5 103 37.9
Ca_24351_v3 Cicer arietinum L. HOM05D000907 ORTHO05D000753 3.4e-07 58.2 103 36.9
PSO675G6344 Papaver somniferum HOM05D000907 ORTHO05D000753 4.4e-07 57.8 102 37.3
Aqoxy7G03112 Aquilegia oxysepala HOM05D000907 ORTHO05D000753 7.5e-07 57.0 103 36.9
Cc02_g19660 Coffea canephora HOM05D000907 ORTHO05D000753 7.5e-07 57.0 102 37.3
CANSAT25G1678 Cannabis sativa HOM05D000907 ORTHO05D000753 9.8e-07 56.6 103 35.0
QL11p031756 Quercus lobata HOM05D000907 ORTHO05D000753 9.8e-07 56.6 103 35.0
Lj1g0006493 Lotus japonicus HOM05D000907 ORTHO05D000753 1.3e-06 56.2 103 35.9
Sopen10g020890 Solanum pennellii HOM05D000907 ORTHO05D000753 1.3e-06 56.2 102 37.3
PGSC0003DMG400005455 Solanum tuberosum HOM05D000907 ORTHO05D000753 1.3e-06 56.2 102 37.3
Duzib052G0696 Durio zibethinus HOM05D000907 ORTHO05D000753 1.7e-06 55.8 103 36.9
Medtr5g005160 Medicago truncatula HOM05D000907 ORTHO05D000753 1.7e-06 55.8 101 34.7
Nn5g30534 Nelumbo nucifera HOM05D000907 ORTHO05D000753 1.7e-06 55.8 103 34.0
GSVIVG01037860001 Vitis vinifera HOM05D000907 ORTHO05D000753 2.2e-06 55.5 103 36.9
CiPaw.05G016000 Carya illinoinensis HOM05D000907 ORTHO05D000753 2.9e-06 55.1 103 35.0
CAN.G407.3 Capsicum annuum HOM05D000907 ORTHO05D000753 3.7e-06 54.7 100 37.0
Haze_10246 Corylus avellana HOM05D000907 ORTHO05D000753 3.7e-06 54.7 103 35.0
PSO541G1990 Papaver somniferum HOM05D000907 ORTHO05D000753 3.7e-06 54.7 102 36.3
Actinidia00385 Actinidia chinensis HOM05D000907 ORTHO05D000753 4.9e-06 54.3 102 34.3
Cfa004648 Carpinus fangiana HOM05D000907 ORTHO05D000753 4.9e-06 54.3 103 34.0
Cpa.g.sc106.75 Carica papaya HOM05D000907 ORTHO05D000753 6.4e-06 53.9 103 33.0
Ciclev10028240m.g Citrus clementina HOM05D000907 ORTHO05D000753 6.4e-06 53.9 103 35.9
Gohir.A04G118900 Gossypium hirsutum HOM05D000907 ORTHO05D000753 8.3e-06 53.5 102 34.3
Gohir.D04G160600 Gossypium hirsutum HOM05D000907 ORTHO05D000753 8.3e-06 53.5 102 34.3
Manes.10G081200 Manihot esculenta HOM05D000907 ORTHO05D000753 8.3e-06 53.5 102 36.3


User provided reference genes

Program Settings