Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001105g0070 Nicotiana tabacum HOM05D007107 ORTHO05D009198 1.1e-56 223.0 111 100.0
Solyc01g107090.2 Solanum lycopersicum HOM05D007107 ORTHO05D009198 1.1e-43 179.9 119 77.3
Sopen01g049360 Solanum pennellii HOM05D007107 ORTHO05D009198 7.1e-43 177.2 113 78.8
Peaxi162Scf00016g02820 Petunia axillaris HOM05D007107 ORTHO05D009198 1.9e-40 169.1 104 79.8
PGSC0003DMG400042480 Solanum tuberosum HOM05D007107 ORTHO05D009198 4.8e-39 164.5 111 74.8
Nitab4.5_0008075g0020 Nicotiana tabacum HOM05D007107 ORTHO05D009198 6.2e-39 164.1 81 96.3
PGSC0003DMG400025844 Solanum tuberosum HOM05D007107 ORTHO05D009198 1.2e-37 159.8 107 77.6
Sopen01g049370 Solanum pennellii HOM05D007107 ORTHO05D009198 2.4e-35 152.1 111 74.8
Solyc01g107100.3 Solanum lycopersicum HOM05D007107 ORTHO05D009198 1.0e-33 146.7 111 73.9
PGSC0003DMG400025747 Solanum tuberosum HOM05D007107 ORTHO05D009198 1.8e-30 136.0 102 73.5
PGR042G2158 Punica granatum HOM05D007107 ORTHO05D009198 1.0e-20 103.6 118 50.0
CSS0000313 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 2.5e-19 99.0 103 55.3
CSS0046981 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 4.2e-19 98.2 104 56.7
Oeu010443.1 Olea europaea HOM05D007107 ORTHO05D009198 7.1e-19 97.4 108 58.3
TAR628G1630 Trochodendron aralioides HOM05D007107 ORTHO05D009198 1.6e-18 96.3 96 57.3
Oeu009671.1 Olea europaea HOM05D007107 ORTHO05D009198 4.6e-18 94.7 92 59.8
Phvul.007G045200 Phaseolus vulgaris HOM05D007107 ORTHO05D009198 6.0e-18 94.4 112 50.0
Glyma.10G257200 Glycine max HOM05D007107 ORTHO05D009198 7.9e-18 94.0 114 49.1
COL.COLO4_32518 Corchorus olitorius HOM05D007107 ORTHO05D009198 6.7e-17 90.9 105 51.4
Glyma.20G134000 Glycine max HOM05D007107 ORTHO05D009198 8.7e-17 90.5 114 47.4
Rhsim11G0151000 Rhododendron simsii HOM05D007107 ORTHO05D009198 1.1e-16 90.1 119 52.9
TPR.G27135 Trifolium pratense HOM05D007107 ORTHO05D009198 1.5e-16 89.7 67 64.2
Gohir.A13G046600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 4.3e-16 88.2 102 52.9
Manes.07G058800 Manihot esculenta HOM05D007107 ORTHO05D009198 4.3e-16 88.2 101 53.5
TAR376G0510 Trochodendron aralioides HOM05D007107 ORTHO05D009198 4.3e-16 88.2 93 52.7
Cc02_g19820 Coffea canephora HOM05D007107 ORTHO05D009198 5.7e-16 87.8 109 45.9
Atru.chr5.2359 Acer truncatum HOM05D007107 ORTHO05D009198 7.4e-16 87.4 97 51.5
Gohir.D13G042600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 7.4e-16 87.4 105 49.5
Gorai.013G050500 Gossypium raimondii HOM05D007107 ORTHO05D009198 7.4e-16 87.4 105 49.5
Ciclev10029615m.g Citrus clementina HOM05D007107 ORTHO05D009198 9.7e-16 87.0 57 71.9
Medtr1g106215 Medicago truncatula HOM05D007107 ORTHO05D009198 9.7e-16 87.0 67 64.2
RcHm_v2.0_Chr6g0253681 Rosa chinensis HOM05D007107 ORTHO05D009198 9.7e-16 87.0 80 60.0
Gohir.D12G020100 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.6e-15 86.3 80 58.8
Gorai.008G020500 Gossypium raimondii HOM05D007107 ORTHO05D009198 1.6e-15 86.3 80 58.8
Lalb_Chr06g0165131 Lupinus albus HOM05D007107 ORTHO05D009198 2.8e-15 85.5 104 47.1
Psat6g214960 Pisum sativum HOM05D007107 ORTHO05D009198 2.8e-15 85.5 112 46.4
Prupe.8G144000 Prunus persica HOM05D007107 ORTHO05D009198 2.8e-15 85.5 80 60.0
Thecc.02G116600 Theobroma cacao HOM05D007107 ORTHO05D009198 2.8e-15 85.5 106 49.1
Cfa004630 Carpinus fangiana HOM05D007107 ORTHO05D009198 3.7e-15 85.1 94 47.9
Duzib248G0083 Durio zibethinus HOM05D007107 ORTHO05D009198 3.7e-15 85.1 114 46.5
Ca_11033_v3 Cicer arietinum L. HOM05D007107 ORTHO05D009198 4.8e-15 84.7 108 49.1
Duzib248G0453 Durio zibethinus HOM05D000446 ORTHO05D000321 4.8e-15 84.7 116 45.7
MD10G1105100 Malus domestica HOM05D007107 ORTHO05D009198 4.8e-15 84.7 60 70.0
EL10Ac8g19388 Beta vulgaris HOM05D007107 ORTHO05D009198 8.2e-15 84.0 63 61.9
Haze_10225 Corylus avellana HOM05D007107 ORTHO05D009198 8.2e-15 84.0 111 47.7
Duzib132G0703 Durio zibethinus HOM05D007107 ORTHO05D009198 8.2e-15 84.0 102 50.0
Gohir.A12G019900 Gossypium hirsutum HOM05D007107 ORTHO05D009198 8.2e-15 84.0 80 57.5
Oeu011135.1 Olea europaea HOM05D007107 ORTHO05D009198 8.2e-15 84.0 102 53.9
Migut.B00446 Erythranthe guttata HOM05D007107 ORTHO05D009198 1.1e-14 83.6 90 55.6
Ah.09g231830 Amaranthus hybridus HOM05D007107 ORTHO05D009198 1.8e-14 82.8 85 50.6
RcHm_v2.0_Chr6g0253721 Rosa chinensis HOM05D007107 ORTHO05D009198 3.1e-14 82.0 99 51.5
DCAR_001690 Daucus carota HOM05D007107 ORTHO05D009198 4.1e-14 81.6 63 66.7
Lsat_1_v5_gn_9_111721 Lactuca sativa HOM05D007107 ORTHO05D009198 4.1e-14 81.6 92 52.2
Lj5g0011883 Lotus japonicus HOM05D007107 ORTHO05D009198 4.1e-14 81.6 116 44.0
QL11p022494 Quercus lobata HOM05D007107 ORTHO05D009198 4.1e-14 81.6 88 52.3
Sc08g0004510 Simmondsia chinensis HOM05D007107 ORTHO05D009198 5.3e-14 81.3 107 45.8
Eucgr.G01220 Eucalyptus grandis HOM05D007107 ORTHO05D009198 6.9e-14 80.9 119 42.0
Cpa.g.sc106.53 Carica papaya HOM05D007107 ORTHO05D009198 1.2e-13 80.1 124 41.1
Potri.001G294800 Populus trichocarpa HOM05D007107 ORTHO05D009198 2.0e-13 79.3 104 49.0
Nn5g30571 Nelumbo nucifera HOM05D007107 ORTHO05D009198 3.4e-13 78.6 71 60.6
CiPaw.05G017500 Carya illinoinensis HOM05D007107 ORTHO05D009198 4.5e-13 78.2 89 52.8
FAN15G2005 Fragaria x ananassa HOM05D007107 ORTHO05D025431 7.6e-13 77.4 102 49.0
Rhsim11G0153200 Rhododendron simsii HOM05D007107 ORTHO05D009198 7.6e-13 77.4 68 64.7
Aqoxy5G00877 Aquilegia oxysepala HOM05D007107 ORTHO05D009198 1.0e-12 77.0 102 48.0
MELO3C018001.2 Cucumis melo HOM05D007107 ORTHO05D009198 1.0e-12 77.0 68 60.3
Hma1.2p1_1773F.1_g301790 Hydrangea macrophylla HOM05D007107 ORTHO05D009198 1.7e-12 76.3 114 39.5
Thhalv10021824m.g Eutrema salsugineum HOM05D007107 ORTHO05D009198 2.2e-12 75.9 69 53.6
ClCG10G010430 Citrullus lanatus HOM05D007107 ORTHO05D009198 2.9e-12 75.5 85 51.8
CsaV3_4G000330 Cucumis sativus L. HOM05D007107 ORTHO05D009198 2.9e-12 75.5 76 53.9
A03p41330 Brassica napus HOM05D007107 ORTHO05D009198 1.1e-11 73.6 69 52.2
BraA03t13287Z Brassica rapa HOM05D007107 ORTHO05D009198 1.1e-11 73.6 69 52.2
FAN20G1224 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.1e-11 73.6 99 47.5
Lsat_1_v5_gn_5_114201 Lactuca sativa HOM05D007107 ORTHO05D009198 1.9e-11 72.8 83 49.4
BcaC09g48926 Brassica carinata HOM05D007107 ORTHO05D009198 5.5e-11 71.2 76 48.7
C01p44500 Brassica napus HOM05D007107 ORTHO05D009198 5.5e-11 71.2 76 48.7
BolC1t04415H Brassica oleracea HOM05D007107 ORTHO05D009198 5.5e-11 71.2 76 48.7
AL3G33050 Arabidopsis lyrata HOM05D007107 ORTHO05D009198 7.2e-11 70.9 66 53.0
FvH4_2g04290 Fragaria vesca HOM05D007107 ORTHO05D009198 9.4e-11 70.5 102 46.1
FAN24G0068 Fragaria x ananassa HOM05D007107 ORTHO05D009198 9.4e-11 70.5 102 46.1
AT3G19615 Arabidopsis thaliana HOM05D007107 ORTHO05D009198 1.2e-10 70.1 93 44.1
BcaC01g03614 Brassica carinata HOM05D007107 ORTHO05D009198 1.2e-10 70.1 69 50.7
C03p50490 Brassica napus HOM05D007107 ORTHO05D009198 1.2e-10 70.1 69 50.7
ECA234G2040 Erigeron canadensis HOM05D007107 ORTHO05D009198 1.2e-10 70.1 78 52.6
A01p35080 Brassica napus HOM05D007107 ORTHO05D009198 1.6e-10 69.7 91 44.0
BraA01t03589Z Brassica rapa HOM05D007107 ORTHO05D009198 1.6e-10 69.7 91 44.0
BcaB04g20690 Brassica carinata HOM05D007107 ORTHO05D009198 2.1e-10 69.3 73 49.3
CANSAT25G2317 Cannabis sativa HOM05D007107 ORTHO05D009198 2.1e-10 69.3 116 43.1
BolC3t17339H Brassica oleracea HOM05D007107 ORTHO05D009198 3.6e-10 68.6 70 50.0
Ah.14g085610 Amaranthus hybridus HOM05D007107 ORTHO05D009198 4.6e-10 68.2 63 55.6
Carub.0003s1948 Capsella rubella HOM05D007107 ORTHO05D009198 4.6e-10 68.2 93 43.0
CARHR095070 Cardamine hirsuta HOM05D007107 ORTHO05D009198 7.9e-10 67.4 115 37.4
CiPaw.06G165600 Carya illinoinensis HOM05D007107 ORTHO05D009198 7.9e-10 67.4 83 53.0
MBI16_g29126_MAGBIO Magnolia biondii HOM05D007107 ORTHO05D009198 3.0e-09 65.5 74 50.0
SalBow6G0491 Salvia bowleyana HOM05D007107 ORTHO05D009198 5.1e-09 64.7 64 56.2
Sed0004586 Sechium edule HOM05D007107 ORTHO05D009198 8.8e-09 63.9 96 45.8
Sed0023372 Sechium edule HOM05D007107 ORTHO05D009198 1.1e-08 63.5 90 46.7
Oeu008318.1 Olea europaea HOM05D007107 ORTHO05D009198 1.5e-08 63.2 56 66.1
BcaB04g19054 Brassica carinata HOM05D007107 ORTHO05D009198 9.7e-08 60.5 64 50.0
RcHm_v2.0_Chr6g0253731 Rosa chinensis HOM05D007107 ORTHO05D025431 1.3e-07 60.1 79 40.5
ECA240G1449 Erigeron canadensis HOM05D007107 ORTHO05D009198 1.7e-07 59.7 56 58.9
FAN24G0803 Fragaria x ananassa HOM05D007107 ORTHO05D025431 8.2e-07 57.4 103 38.8
Lalb_Chr25g0278741 Lupinus albus HOM05D007107 ORTHO05D009198 1.4e-06 56.6 54 53.7
FvH4_2g04291 Fragaria vesca HOM05D007107 ORTHO05D025431 5.3e-06 54.7 82 42.7
C05p45210 Brassica napus HOM05D007107 ORTHO05D009198 6.9e-06 54.3 93 39.8
unitig_27.g25075 Utricularia gibba HOM05D007107 ORTHO05D009198 6.9e-06 54.3 51 60.8


User provided reference genes

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