Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 4.3e-89 331.3 161 100.0
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 1.7e-85 319.3 161 95.7
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 2.0e-83 312.4 161 92.5
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 4.6e-83 311.2 161 91.9
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 3.0e-82 308.5 161 91.3
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 3.9e-82 308.1 161 90.7
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 1.2e-78 296.6 154 92.2
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 4.3e-73 278.1 161 80.1
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 9.5e-73 276.9 157 82.2
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 3.6e-72 275.0 161 78.9
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 6.2e-72 274.2 161 77.6
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 6.2e-72 274.2 161 78.3
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 1.4e-71 273.1 159 78.6
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 1.4e-71 273.1 161 79.5
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 3.1e-71 271.9 161 77.0
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 3.1e-71 271.9 157 77.7
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 3.1e-71 271.9 157 77.7
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 5.2e-71 271.2 157 79.0
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 2.6e-70 268.9 160 76.9
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 2.6e-70 268.9 157 78.3
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 2.6e-70 268.9 161 76.4
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 4.4e-70 268.1 157 78.3
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 4.4e-70 268.1 157 77.7
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 4.4e-70 268.1 158 75.3
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 7.6e-70 267.3 161 74.5
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 1.3e-69 266.5 157 77.1
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 1.3e-69 266.5 157 77.7
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 1.7e-69 266.2 161 76.4
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 1.7e-69 266.2 157 78.3
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 2.2e-69 265.8 157 76.4
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 2.9e-69 265.4 161 75.8
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 2.9e-69 265.4 159 76.1
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 3.8e-69 265.0 157 77.1
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 1.1e-68 263.5 161 73.3
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 1.1e-68 263.5 161 75.8
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 1.9e-68 262.7 157 75.8
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 1.9e-68 262.7 159 76.7
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 1.9e-68 262.7 161 75.2
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 2.4e-68 262.3 161 75.8
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 2.4e-68 262.3 161 75.2
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 3.2e-68 261.9 157 75.2
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 3.2e-68 261.9 161 76.4
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 4.1e-68 261.5 157 77.1
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 4.1e-68 261.5 157 77.1
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 5.4e-68 261.2 161 73.3
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 7.1e-68 260.8 158 75.9
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 9.2e-68 260.4 161 74.5
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 9.2e-68 260.4 158 73.4
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 9.2e-68 260.4 153 78.4
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 1.2e-67 260.0 159 74.2
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 1.2e-67 260.0 161 75.2
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 4.6e-67 258.1 159 72.3
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 7.8e-67 257.3 158 75.9
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 7.8e-67 257.3 160 73.8
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 1.3e-66 256.5 159 75.5
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 1.3e-66 256.5 156 76.3
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 1.7e-66 256.1 161 73.3
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 3.9e-66 255.0 159 73.0
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 5.1e-66 254.6 161 72.7
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 8.6e-66 253.8 157 75.8
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 8.6e-66 253.8 159 71.7
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 8.6e-66 253.8 158 74.7
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 1.1e-65 253.4 157 72.6
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 2.5e-65 252.3 157 71.3
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 3.3e-65 251.9 157 73.9
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 4.3e-65 251.5 157 71.3
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 7.3e-65 250.8 158 73.4
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 9.6e-65 250.4 154 74.0
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 1.2e-64 250.0 157 72.6
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 2.1e-64 249.2 150 76.7
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 1.4e-63 246.5 157 72.0
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 3.1e-63 245.4 161 68.9
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 3.1e-63 245.4 152 73.0
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 3.1e-63 245.4 152 73.0
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 3.4e-62 241.9 161 68.9
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 7.6e-62 240.7 160 69.4
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 1.3e-61 240.0 157 69.4
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 2.2e-61 239.2 155 71.0
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 6.4e-61 237.7 161 67.7
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 2.1e-59 232.6 161 69.6
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 1.5e-57 226.5 140 72.1
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 1.3e-56 223.4 159 66.7
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 6.2e-56 221.1 135 74.1
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 6.9e-55 217.6 157 61.1
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 2.6e-54 215.7 157 61.1
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 2.6e-54 215.7 157 61.1
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 2.6e-54 215.7 157 61.1
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 2.6e-54 215.7 157 61.1
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 2.6e-54 215.7 157 61.1
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 5.8e-54 214.5 157 60.5
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 9.9e-54 213.8 157 60.5
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 2.9e-53 212.2 153 60.8
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 8.4e-53 210.7 157 59.9
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 1.1e-52 210.3 157 60.5
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 1.9e-52 209.5 159 61.0
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 7.1e-52 207.6 171 57.3
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 2.3e-50 202.6 160 58.8
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 1.1e-47 193.7 122 72.1
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 9.0e-47 190.7 157 56.1
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 2.0e-46 189.5 145 60.0
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 1.6e-43 179.9 108 80.6
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 9.6e-41 170.6 159 50.9
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 9.6e-41 170.6 108 78.7
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 1.1e-39 167.2 105 79.0
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 1.1e-39 167.2 107 76.6
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 1.1e-39 167.2 160 50.6
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 2.4e-39 166.0 104 76.0
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 7.6e-38 161.0 106 73.6
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 6.5e-37 157.9 159 46.5
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 4.6e-35 151.8 106 68.9
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 1.3e-34 150.2 90 74.4
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 1.6e-32 143.3 127 55.1
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 4.1e-23 112.1 109 50.5
Cre05.g247150 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D008347 9.1e-23 110.9 189 33.9
MCO12G139 Micromonas commoda HOM05D002857 ORTHO05D008347 1.2e-22 110.5 161 38.5
QL11p030572 Quercus lobata HOM05D002857 ORTHO05D008347 7.2e-20 101.3 53 77.4
AUR62030843 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.0e-18 97.4 56 73.2
Cfa021534 Carpinus fangiana HOM05D002857 ORTHO05D008347 2.3e-18 96.3 55 72.7
PRCOL_00006372 Prasinoderma coloniale HOM05D002857 ORTHO05D008347 1.1e-17 94.0 157 34.4
Sc18g0007410 Simmondsia chinensis HOM05D002857 ORTHO05D008347 7.4e-17 91.3 58 70.7
Sc18g0007450 Simmondsia chinensis HOM05D002857 ORTHO05D008347 7.4e-17 91.3 58 70.7
CARHR040040 Cardamine hirsuta HOM05D002857 ORTHO05D008347 4.2e-12 75.5 58 56.9
Nn5g29163 Nelumbo nucifera HOM05D002857 ORTHO05D008347 7.0e-07 58.2 38 73.7


User provided reference genes

Program Settings