Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 3.9e-176 621.3 308 100.0
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 4.0e-144 515.0 301 86.4
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 2.8e-137 492.3 284 86.3
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 8.0e-137 490.7 310 80.3
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 2.3e-136 489.2 284 85.9
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 5.1e-115 418.3 260 76.9
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 6.6e-115 417.9 257 83.3
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.2e-111 407.1 286 71.0
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 3.4e-111 405.6 272 72.8
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 4.9e-110 401.7 281 69.8
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 4.9e-110 401.7 262 74.4
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 8.4e-110 401.0 276 71.7
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 1.1e-109 400.6 260 74.2
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 5.4e-109 398.3 284 70.4
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 7.1e-109 397.9 262 74.0
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 3.5e-108 395.6 292 68.5
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 4.6e-108 395.2 260 74.2
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 4.6e-108 395.2 275 72.0
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 1.0e-107 394.0 277 70.8
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 1.3e-107 393.7 272 71.7
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 3.0e-107 392.5 280 70.4
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 3.9e-107 392.1 287 70.7
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 5.6e-106 388.3 285 67.7
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 2.1e-105 386.3 264 70.8
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 2.1e-105 386.3 265 72.1
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 2.8e-105 386.0 258 74.4
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 3.6e-105 385.6 274 67.9
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 2.4e-104 382.9 284 68.0
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 5.3e-104 381.7 279 69.5
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 9.0e-104 380.9 281 67.3
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 2.0e-103 379.8 261 71.6
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.6e-103 379.4 253 72.3
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 3.8e-102 375.6 263 69.2
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 4.9e-102 375.2 262 68.3
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 6.4e-102 374.8 248 71.4
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 6.4e-102 374.8 304 65.1
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.9e-101 373.2 274 66.1
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.9e-101 373.2 274 66.1
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 3.2e-101 372.5 262 70.6
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 5.4e-101 371.7 284 65.5
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 5.4e-101 371.7 263 70.0
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.2e-100 370.5 278 68.0
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 1.6e-100 370.2 278 65.5
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 1.6e-100 370.2 318 59.7
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 4.6e-100 368.6 255 69.0
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 1.3e-99 367.1 270 67.4
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.8e-99 366.7 281 63.7
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.3e-99 366.3 268 66.4
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 3.0e-99 365.9 249 69.1
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 3.0e-99 365.9 275 66.5
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 3.9e-99 365.5 307 62.9
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.9e-99 365.5 268 66.0
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 5.1e-99 365.2 257 72.4
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 6.7e-99 364.8 252 70.2
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 8.7e-99 364.4 281 63.0
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 8.7e-99 364.4 265 68.3
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.1e-98 364.0 278 65.5
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 1.1e-98 364.0 255 70.6
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 3.3e-98 362.5 267 67.0
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 3.3e-98 362.5 260 69.2
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 7.4e-98 361.3 255 67.1
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 1.8e-96 356.7 295 61.0
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 3.1e-96 355.9 263 67.7
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 6.9e-96 354.8 263 65.4
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.0e-95 353.2 229 74.2
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 2.6e-95 352.8 227 74.0
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 4.5e-95 352.1 237 72.2
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 4.5e-95 352.1 280 60.7
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 1.7e-94 350.1 277 62.8
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 4.9e-94 348.6 264 65.2
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 6.4e-94 348.2 264 64.8
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 1.1e-93 347.4 228 72.8
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 3.2e-93 345.9 271 64.2
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.2e-92 344.0 280 61.8
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 2.7e-92 342.8 258 64.7
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 1.8e-91 340.1 268 63.8
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 2.3e-91 339.7 231 68.8
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 1.5e-90 337.0 228 71.1
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 3.3e-90 335.9 226 71.7
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 5.6e-90 335.1 228 70.2
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.2e-87 327.4 203 77.8
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 3.4e-87 325.9 260 63.8
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 4.2e-85 318.9 254 61.4
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 1.3e-83 313.9 216 69.4
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 3.0e-83 312.8 217 71.9
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 1.8e-80 303.5 209 69.9
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 4.1e-80 302.4 208 71.2
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 6.5e-78 295.0 205 71.7
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 2.5e-77 293.1 205 70.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 9.7e-74 281.2 261 57.9
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 1.3e-70 270.8 275 50.5
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 1.7e-70 270.4 187 69.5
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 3.2e-69 266.2 181 69.6
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 1.4e-67 260.8 278 50.0
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 2.3e-67 260.0 263 48.7
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 2.6e-66 256.5 253 52.2
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 8.2e-65 251.5 220 61.4
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.2e-62 243.4 165 70.9
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.6e-60 237.3 188 65.4
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 4.7e-60 235.7 272 45.6
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 1.2e-55 221.1 250 46.0
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.1e-48 198.0 118 78.8
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 1.8e-48 197.2 263 42.6
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 5.3e-48 195.7 274 44.9
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 9.8e-34 148.3 105 68.6
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 9.2e-32 141.7 185 41.6
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 4.3e-29 132.9 100 66.0
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 2.3e-27 127.1 100 61.0
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 4.9e-25 119.4 336 29.8
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 9.2e-24 115.2 299 31.8
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 3.7e-17 93.2 103 51.5
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 8.3e-17 92.0 102 51.0
PGSC0003DMG402025733 Solanum tuberosum HOM05D001568 ORTHO05D008804 6.2e-12 75.9 52 71.2
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 8.1e-12 75.5 54 66.7
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 1.5e-10 71.2 253 24.1
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 9.9e-10 68.6 69 52.2
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 2.7e-07 60.5 52 50.0
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 2.7e-07 60.5 52 50.0
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 2.7e-07 60.5 52 50.0
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 2.7e-07 60.5 52 50.0
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 7.8e-07 58.9 34 73.5


User provided reference genes

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